KEGG   Coprinopsis cinerea (gray shag): CC1G_10527
Entry
CC1G_10527        CDS       T01275                                 
Name
(RefSeq) TFIID and SAGA subunit
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
cci  Coprinopsis cinerea (gray shag)
Pathway
cci03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:cci00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    CC1G_10527
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cci03021]
    CC1G_10527
   03036 Chromosome and associated proteins [BR:cci03036]
    CC1G_10527
Transcription machinery [BR:cci03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     CC1G_10527
   Coactivators
    SAGA/TFTC/STAGA complex
     CC1G_10527
Chromosome and associated proteins [BR:cci03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     CC1G_10527
    STAGA complex
     CC1G_10527
    TFTC complex
     CC1G_10527
    SAGA complex
     CC1G_10527
    SLIK complex
     CC1G_10527
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz TFIID_NTD2 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_EML_2 EIF3I Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_SCAP WDR55 WD40_MABP1-WDR62_1st Beta-prop_DCAF4 Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_IFT122_1st ANAPC4_WD40 NBCH_WD40 WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_IFT140_1st Beta-prop_EIPR1 Beta-prop_SPT8 Beta-prop_WDR19_1st Beta-prop_HPS5 LisH
Other DBs
NCBI-GeneID: 6005080
NCBI-ProteinID: XP_001828655
UniProt: A8N1A6
LinkDB
Position
1
AA seq 786 aa
MSAATPASSQSPPAASPGNASQDPTPALSLPERVILDYLRARGHTSAEKAFLEEVEDRPP
EEKSKNETLGQEELVRALAVYAQKPSRPGENALKESSTVLQELGTMGNPVNIQSLIASIE
DVGAEELLALDPTDKEIGFAELEAWVDGSLDMYRPEFRPILFPIFCHFYLDLIQQGFKEA
ALRFFNTFSPSLATSHTATIHHLSTLLLPAHVQADELAQRFRNEKYVLRMSRSGFSLLVG
WLTEGFGGEAMGSGDGFTGEQGKRGRAAVMRVVNNHLKFDVTSSNPTSVSPHAWEESTGL
LSSLIPSAAGGKTAANPQAFNASKGELKLGPAPISEELRNETERVLREQAMVSGDPTAHM
DLQYTRPVPPAGLVAPTEADLLPHPPTFKSVDVEREVSAVRDARKRIRLDPSAIGNVDLN
SPQATSLKVRALPSVCAYTLHDVTEGAPCMTFSQDTSLMAAGFAESYIRLWSLKGEKLRG
LRSDFSSSSVKDAASLQKIREKKGSTTRKLIGHSGPVYSVDFDPVNGSAAPPKYLLSSSA
DATVRLWSMDTLTNVVAFRGHENPVWDVKWSPMGIYFATGSRDRTARLWSTDRTACLRIY
AGHLGDVDCVGFHPNSLYLATGSSDWTARLWDVQRGASVRVFVGHQGPVSCLTLSPDGRY
LATAGEDLAINLWDLGSGKRVKKMTGHTSSIYSLAFSAESSLLVSGGADWTVRCWDVKSA
GGLRAKPTENGDTENKARPGNREEESIETVDLLATFPTKRTPITNVQFTPRNLCLVGGNY
LSSEQR
NT seq 2361 nt   +upstreamnt  +downstreamnt
atgtcggcggctacaccagcgtcgtcgcagtcgccacctgctgcttcgccaggaaatgca
tcccaggacccaacaccagctttatcattacctgaacgcgtaatcttggactaccttcga
gcaagaggacatacttccgcagagaaagcattcctcgaagaggttgaagatcgcccacca
gaggaaaagtcaaagaatgaaacacttggtcaggaagaactggttcgggctctagctgtc
tatgcccagaagccttcgaggcccggggagaatgccctcaaagaatcatcgacagtcctg
caggagttgggcactatgggcaaccctgtcaacattcaaagccttattgccagtattgaa
gatgtcggagctgaagaactacttgcgcttgaccccacggacaaggagattggctttgca
gaactcgaagcatgggtcgatggatcgttggatatgtaccgtcccgagttcagaccaatt
ctctttcctatattctgccatttctatctggatttgattcagcaaggattcaaggaagca
gcactccgattctttaacactttttccccatccctggcaacatcacatacagcgacaatc
catcacctatctaccctcctcctccctgctcatgttcaagccgatgagcttgcccaacgt
ttcaggaatgagaaatacgtcctccgaatgagccgttctggttttagtctgttggtcggg
tggttaacagaggggtttggcggagaggcaatgggttctggagatggattcaccggagaa
cagggcaaacgaggtcgtgcagcagtcatgcgagtagtcaacaaccacctcaaatttgac
gtaacatcctcaaaccctacttctgtctcgccgcatgcatgggaggaatcgactggcctc
ctttcttccctcatcccttcagctgccgggggaaaaactgctgcaaaccctcaagccttc
aatgccagtaaaggcgaactgaagctaggccctgcgccgatttcagaagagctgcgaaat
gagacagaacgagtccttcgcgagcaagcaatggtcagcggggaccccacagcgcacatg
gatttacaatacactcgaccggtcccccctgctggactcgtggcgccgacagaagcagac
cttttaccccacccacccaccttcaaatccgtcgatgtcgagagggaagtgagtgccgtc
cgagatgctaggaaacgaattcgtctggacccttcggcaatcggcaatgttgacttgaac
tctcctcaagcgacttcacttaaagtacgcgctctcccgagcgtatgcgcatacacgtta
catgatgtaaccgaaggcgcaccatgcatgacattctcccaagacacttctctgatggca
gctggctttgcagaaagctatatccgtttatggagtctcaaaggcgaaaagcttagaggt
ttgagaagtgacttttcttcaagctctgtcaaagatgccgcatctctgcagaaaatcagg
gaaaagaagggaagcactacacggaaactaataggccacagcgggcctgtttattccgta
gatttcgaccctgtaaacggctccgctgctccaccgaagtatttgttgtcctcctcagcc
gatgcaacagtcagattatggtctatggataccttgacaaacgtcgtcgccttccgagga
cacgagaacccagtgtgggatgttaaatggagtcccatgggaatttactttgcgaccgga
agcagggatcgcacggcgcggttgtggtcgacagacagaacggcgtgcttgcgaatatac
gccggtcatttgggagatgtggattgcgtcgggttccatcctaattctttatatctggct
acagggtccagtgactggacagctcgtctgtgggatgtccaacgaggcgcgagcgttcgt
gtcttcgtcggacatcagggacctgtgtcgtgtctgacgctgagtccggatggtcgttat
ctcgcgacagctggagaagacctcgccattaacctgtgggatcttggctcgggtaaacgc
gtcaagaagatgacaggccatacgtcgtccatatactcgttggcctttagtgcggagtcg
tcactgctggtcagtggtggcgctgactggactgtgaggtgttgggacgtcaagagtgct
ggtggtctgagagccaagcctacagaaaatggagacactgaaaacaaagctcggccaggg
aacagagaggaagagagcattgaaaccgtggacttgttagctactttcccgacgaaacgg
acaccgataacgaacgttcagttcactccccgaaacctttgcttagttggtggcaactat
ctctcttcagagcagagatga

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