Coprinopsis cinerea (gray shag): CC1G_11088
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Entry
CC1G_11088 CDS
T01275
Name
(RefSeq) mRNA 3'-end-processing protein RNA14
KO
K14408
cleavage stimulation factor subunit 3
Organism
cci
Coprinopsis cinerea (gray shag)
Pathway
cci03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cci00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
CC1G_11088
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cci03019
]
CC1G_11088
Messenger RNA biogenesis [BR:
cci03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
CC1G_11088
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_CcmH_CycH
FTCD_C
Peptidase_M3_N_2
TPPII_C
Motif
Other DBs
NCBI-GeneID:
6016002
NCBI-ProteinID:
XP_001839388
UniProt:
A8P7L9
LinkDB
All DBs
Position
5
AA seq
857 aa
AA seq
DB search
MDEPQNDEHSFQGEATQPTEEIIAALNASNASEQSNPPQSEFDGLFSKLSENPYDPDGWR
RLIDLANESGEITKIQQAYNELLKHYPNTSAAQIAYINHFLNKEDTFTEAEQLFIKFLRT
SPSVDLWKFYLTYVRRRNVGPATRDIVRKSYEFALQHVGQDKESGEIWNDYIQFLKAGET
SSTWEEQQKMDALRKVYHRAVQIPLDNVERLWSELETFEMNLNKITAKKFMSDLSPAHMQ
ARTTLRQLSNHMNGLYPPSSSNNDLFLPSQPKFDAAERSLVGKWKAYLKWEESNPLELED
KDKQTFITRLQGVYRKAVIRMRFYAEIWFMAYTWTNSVGKTDEALAILKAGMEAVPSSFL
LTFAYAEAMELKKDFAEVHSAYEKLLSVLVKELEALEKSTANANTNGTQQNGSNPNNTND
TSFNSQSSDDKPPKNSELQEKRTEYGLVYIMYMRFARRTEGLAALRRVFAKARRDRFSPW
EVYEACALMEYHCFDDKNVASRIFEKGLEQFGDEIDYVLRYLGFLISINDGNNARALFER
VITTFSPERARPLWERWARYEYQYGDLESALKLEKRIAEVYPTDPPIKRFAQRHMYLGTD
AIAARDLGFSMAKRAGTSASSSNNSLGRTETSGSLLTGLGPSNAAKRPASPDNYRNPKRD
DKGGDYGAGHKRARGPASPAREREIPPPRDRDRDVQMRDRDRGDRGDRWNDRGRRGSPGP
GGWDRDRDDRDGGRGRGGPAGGGRDGGRDYPRGPPEPQIPPLVSWFMGELPPAASFDGPI
FKTDDLMKAFKQAQIPAAAPAGGHGGPAAPMGPPHSTAGRNRSPAPTYPQHRGGGRPPPD
YGPYQGPGGGRAAGRRY
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atggacgaaccacaaaacgacgaacacagcttccaaggcgaagccactcaaccgacggaa
gaaattatcgctgcgctgaacgccagcaacgcctccgaacagtccaaccctccgcaaagc
gaattcgatggcctattctcaaaactatcggagaacccgtacgaccctgatggctggaga
aggcttattgaccttgcaaacgagagtggtgagattaccaagatccaacaagcctacaac
gaactcttgaagcattatccaaatacctctgctgctcaaatcgcgtatataaaccacttt
ctgaacaaagaagacaccttcacagaagccgaacaactctttatcaagtttctgagaacc
tctcccagcgtcgacctatggaaattctacctaacttatgtccggcgtcgaaatgtaggg
cccgcaacgcgggacattgtccgaaaatcatatgagtttgcccttcaacacgtcggtcaa
gacaaggagtccggtgaaatctggaacgactacatccaattcctcaaggcaggcgaaacg
tcctcaacatgggaagaacaacagaagatggacgcgctccgcaaagtgtaccaccgtgcc
gtgcaaatccctctggacaacgtcgagcggctctggtcagagcttgagaccttcgagatg
aacctcaacaagatcaccgcgaagaaattcatgtccgatctctcgcctgcccatatgcag
gcccgaacaactctaaggcaactttcaaaccatatgaacggtttatatcccccatcgtcc
tccaataacgacctctttttgccgtcacagcccaagtttgatgccgcagaacgcagtctc
gtcggcaagtggaaagcctacctgaagtgggaagaaagcaaccccctggagctcgaagac
aaggacaagcagacttttatcacccggttacagggtgtctaccgcaaggccgtcatcaga
atgaggttttatgcggaaatctggttcatggcatatacttggacgaacagtgtaggcaag
accgatgaagccctggctatcttgaaggccggaatggaagccgttccgtcaagtttcctg
ctcacgtttgcttatgccgaagcaatggagctcaagaaggatttcgctgaggttcattcc
gcttacgagaaacttttgagtgtccttgtgaaggagctggaagcgctcgagaagtctacg
gccaacgccaacaccaatggaacacagcaaaatggaagtaacccgaataacaccaacgat
acctcgttcaatagccagtcgtccgatgacaagccacccaagaacagtgagctacaggaa
aaacggacagagtatggcttagtatacattatgtacatgcgatttgctagacggacagag
gggttggctgctctgcggagggtgttcgccaaggccaggagagatcgcttttctccttgg
gaggtgtacgaagcgtgtgcgctgatggaataccattgcttcgacgacaagaacgttgcc
agcagaatctttgagaaaggtttggagcagttcggtgacgaaatcgattacgtcctccga
tacctcggtttcctcatcagcatcaacgacgggaacaatgcacgagcgttgttcgagcgt
gttatcacaacattctcgcctgagagggcacgtcctctatgggagcgatgggcgaggtac
gagtaccagtacggagacttggaatcagctcttaaactcgagaaacgaatcgccgaggtc
tacccaactgaccctcccatcaagcgtttcgctcaacggcatatgtatttgggcaccgat
gccatcgctgctcgggatctcgggttctcaatggccaaacgggctggcacgtctgcctcc
tcttccaacaattcactcggccgcaccgaaacatcaggatcactgctaaccggtttggga
ccatcgaatgcggccaaacgacctgcttcgccggacaactatcgtaatccgaaacgcgac
gataaaggcggcgactatggcgctgggcataaacgtgccagaggtccggcctcgcctgca
cgtgaacgcgagataccgccgcccagggatagggatcgtgacgtgcagatgcgggataga
gataggggggataggggagatagatggaatgacaggggtcgaagaggatcacctggcccg
ggtggatgggacagagatcgggatgatagagatggtggtcgtggtcgcggtggtcccgct
ggcggcgggcgcgacggtggccgggattaccctcgagggcctcccgaaccacagatccct
cctcttgtatcatggtttatgggagaacttccaccagccgctagcttcgacgggcccata
tttaagacggacgatctcatgaaagctttcaagcaagcgcaaataccagctgcagcaccg
gcgggtggacatggcgggccagctgctccaatgggccctccacactctacagctggtaga
aatcggtcacccgcacccacatatccccagcatcgtggaggtgggcggccaccgccggat
tatggtccatatcaagggccagggggcggtcgggcggctgggcggcggtactaa
DBGET
integrated database retrieval system
