KEGG   Coprinopsis cinerea (gray shag): CC1G_11164
Entry
CC1G_11164        CDS       T01275                                 
Name
(RefSeq) DNA clamp loader
  KO
K10756  replication factor C subunit 3/5
Organism
cci  Coprinopsis cinerea (gray shag)
Pathway
cci03030  DNA replication
cci03410  Base excision repair
cci03420  Nucleotide excision repair
cci03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cci00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CC1G_11164
   03410 Base excision repair
    CC1G_11164
   03420 Nucleotide excision repair
    CC1G_11164
   03430 Mismatch repair
    CC1G_11164
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cci03032]
    CC1G_11164
   03036 Chromosome and associated proteins [BR:cci03036]
    CC1G_11164
   03400 DNA repair and recombination proteins [BR:cci03400]
    CC1G_11164
DNA replication proteins [BR:cci03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    CC1G_11164
  DNA Replication Termination Factors
   ELG1-RFC complex
    CC1G_11164
Chromosome and associated proteins [BR:cci03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    CC1G_11164
DNA repair and recombination proteins [BR:cci03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     CC1G_11164
  Check point factors
   HRAD17(Rad24)-RFC complex
    CC1G_11164
SSDB
Motif
Pfam: DNA_pol3_delta2 RCF1-5-like_lid RFC_C AAA AAA_22 PRK AAA_5 AAA_16 DUF3802
Other DBs
NCBI-GeneID: 6015313
NCBI-ProteinID: XP_001838721
UniProt: A8P4C3
LinkDB
Position
4
AA seq 314 aa
MSLWVDQAASGDFPHMLFYGPSGAGKKTRISCTLKQLFGAGVEKLKIDQRVFLTPSKRKM
EINIVQSNYHIEITPSEAGNYDRLIVQEILKEIAQTQQVDLNAKQRFKVVVINEADSLSR
DAQAALRRTMEKYMSNMRIILCANSTSKLIAPIKSRCLLIRVAAPNEEEMATVLNYVARR
AGFDLPPEAAKEIIDDSGGNLRKAILVLEALKMQSPDLTGPLTIAKPDWETYCHKVADLI
VMEQSPAQVMATIAERVVEKVDESLKADVMHWAAFYEVRMRLGNKKIFHLEAWVIKVMSL
YKHFFYDIDMSAFD
NT seq 945 nt   +upstreamnt  +downstreamnt
atgtctctctgggtcgaccaagcggcgtcaggagactttcctcacatgctgttctacgga
ccgtcaggggcagggaagaagacacgtataagctgcacactgaaacagttatttggtgca
ggggtggagaagctaaaaatcgaccagcgtgttttcctcacaccttccaaaaggaagatg
gagatcaacatcgtccaaagcaactaccatattgaaatcacaccgagtgaagcgggaaac
tatgaccggttgattgtgcaagagatccttaaagagatcgcgcaaacgcagcaggtcgat
ctgaatgcaaagcagcggttcaaagttgtcgtcatcaatgaagcagactccttatcccgg
gacgcgcaggccgctcttcgaagaacaatggagaaatacatgtcgaatatgcgaattatt
ctctgcgccaacagcaccagcaaactcattgcacccatcaagagtcgatgtctcctcatt
cgagtcgcagcacccaatgaggaggagatggccaccgtgcttaattacgtcgccaggaga
gcagggttcgatctaccgcctgaagctgcaaaagagatcatcgatgactccggtggaaat
cttcgcaaggctattcttgtcctcgaagcattgaaaatgcaatcccctgacctcactggt
cctttgacgatagccaaaccagattgggagacgtattgccacaaggttgcagatctcatc
gttatggagcaatcaccagcacaggtcatggcgactatcgcggagcgggttgtggagaaa
gtggacgagagcttgaaagcggatgtaatgcactgggcagcgttctacgaggtaagaatg
cgattaggcaacaagaagatcttccacctcgaggcctgggttatcaaggtcatgagcctg
tacaaacactttttctacgatattgatatgtccgcctttgactag

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