Coprinopsis cinerea (gray shag): CC1G_11305
Help
Entry
CC1G_11305 CDS
T01275
Name
(RefSeq) vacuolar protein sorting-associated protein vps13
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
cci
Coprinopsis cinerea (gray shag)
Brite
KEGG Orthology (KO) [BR:
cci00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cci04131
]
CC1G_11305
Membrane trafficking [BR:
cci04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
CC1G_11305
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS13_N
VPS13_VAB
VPS13_M
VPS13_C
Motif
Other DBs
NCBI-GeneID:
6005140
NCBI-ProteinID:
XP_001828715
UniProt:
A8N1G6
LinkDB
All DBs
Position
1
AA seq
3110 aa
AA seq
DB search
MRSVQTFSQLFNRILAPYVENLDLNQVNYGIAQGQLTLRNLRLKRGVLDKFQLPVDVLEG
HLGEFTLSLHWMNLGNQPVEILIKDVYLLVVPSAQTNVSPEEEEARAQAAKAERLENAEL
LHMKGQAETQSESPQTQGLIQSLITKVINNVQVTICNIHIRYEDNVSVPGHPFAAGVTLA
GFAAVSVNEKWQPVFIESTAGAIHKLAKLESLAVYVDTDAKSMSGLPRNEAIEHFSAMID
DKDGRWNHQYILKPVSGEGRIIVNHKIDRNTPRFNIELLFDEIGVALDNDQYRDAISLID
MYHVYMRKHQYRKYQPSKEEIAQSPARARLRYAATAILAGVREKRRKWTWQYFAERRDDR
NRYVELFQKKLLASLVGEELSAIENLEKKLSYEDIRFYRSIARSRLRKDQELRKKIEAEK
KKQQSQKQGWGSWLWGSSSETPKEASIFGENMTEEQRKQLYDVLDYDEKSSLMEALQAPR
DSLKMQVTAKLKRGSFTLRTDPHGECREMMSVVFDVFNATFIQRHGNFETTVSLQDLRVF
DGTTENTLYPQIVRVKRDVERIHTAVEEIEQNSSDIGAETEEPFFFIKFENNPLDDRADT
ALTIRMRHMEIIYYKGYVEAVYKFFKPPASQLESVEALLNAASQTLEGLRKETRAGLEYA
LQTHKTIDIQVDMNAPVIIVPEDITTTECTHLIVDAGHIAVESELGDKKAIHDIHQKRNQ
QYTDEDYRRLESLMYDKLSLNLQDAQFILGKNLKESRNAMVNPSSDNLHLLEKISIGLQI
QKSIVPSAATLTQFKVLGNLPSLQLNLSDMKYRSLMRLIDVCIPKLDDTPEGAVAQRPMP
HRRSASGYNLPRLFEPSNEEYNVDDGEGTDDGSDDKEQFFEADSGSSEPQLHQRAFELEF
RVGTLRASLSKTNREDIEKPLGELSLEGFALSFALYKYHMDVDVTLRSVSTDIIQNDGAI
NLISTPTDVSGSPDLLKVKYSRAQRESPEFQPVYEGIDQNIDVKMSTLVFRVAPEPILAT
YDFIITTFVPQNTPNDASTNGASLDALGSEHAVQQAADDGKIRVLVKLEGVKMVIENDSN
VLATLNLSVADVAVFLRGPTLRVSGRLGDLFLTNDNDRYAILPEFNRLLSIEGQNFADFV
YQTYDPCDENYAGIRSSFKLNAASLKVNFLEGPLHSLYVFLLKLARLKYLYDAATSAAVQ
TAAEMDRTQFDISIKTPILVLPTDPSQSLDVMTMRLGHIEARNSFEDATNKIAASLHGIK
LESLFHDAEKQPHSLKIIDNIDVDAEIAQTVGIEREEDTVRPDTQISVKVSDVKLHLTQR
QYMLLIQLSHSIPRTFSDTLDSSEKSALEQVGGGTEAERRLERPMVNLQPELRTGSEGSV
VWTALDLVVTINAVKLHLYDGSVISEAQQKEHGIVRFALNDKTLRLKQLNDGSMEAQVIL
RSFTMSLTRPGPTRFREIIPAAQHDRNQFMILYTSSASTSQAVLTIDSPQIIFAVDPVFR
LTQFFTSPFEQSRGYTEEGMGNNDVSANDAASQLDFRVDLHEVSISVLENDADPNTRAIR
LYINQILFSQQGIMALNIQRLGMSLIQMGRHTESARFLDDVDLTVSLDTRSSAAQQMTSI
EINAKPIVFRASYRDINLITTIVNKAIELYANSPSASEHSNHDPSYSIDRAIQGRKAETS
VIHASAASKTAAIGKARVMMSKEQLRASFDGFRLILIGDMHEQPMLHLKVKPFIVGAKDW
SGALHATTTLATQITYWNLTNSHWEPLIDPWTFTIRVSKDSPTGSMNVSLSASEKLDINL
STTFVELALTTVNTWSKEGAEVLQKPRGVYAPYRIRNCTGTPVVVWSDAEHNAQLSEDSK
VKIANNQIVDWRFGDWRTTREHVSSGQHTIAIQFTEHNWEALKGIPVEREGEYVFSLRPR
TEKYPTRVLFDVKVVDNTKIVTIRSTYKIENLTLYPLELMLIDEHGQPVNSLERVPPGHD
YALPIDAVTKNKVRIQPDQGFGYKWCHPLRWEDLIARKGFTIKCAHSDPKEAAFRFQAWV
QTDSNDIATGKNPKINLRLRAPLELENLLPYNLEYRIYDKNTDQNWRSYLRKGGVMPIHS
VELGHFILLNVTLQDSVFKPSEFAIINTDGHSDFDIEKRLTLRDRQDRKLDLRLNYTRYP
ESGGAFKVQIYSPYIVINKTGLPFSVRSTRSTRAGYQEAAGDTQPDTTRTSAPFRRSFAI
VGGHVTHPLVVLSHSHTDGHEFIFKFGESTWSKMISLEAPSAETEVSVFTPRNSPDQLFT
GLSWSEGQGKYKLTKVIVLTPRFLIRNNLSYPIVFREHGVIPRERAVIPPGERAALRVLR
SSEDKLLTIAYSGINAQWTPPISLEDIGSVYVRLARDGSITDLVRADVVIEGSTIFVLLS
QSDEWPFVIENETDCRFELRQKDESRDGKDQPGYAVPPFSKVQYAWDFPAAKEKRLVLST
KTSRRAIDIMEIGDLMPFKFMDNNKSRAVSLDVRADGQKQVLRISNYNPEHSLYRPRQRS
GSVNVSRQDTISSAEGFEAITEAVTTTFTFTLEWSGIGLSLVNKRLVEVIYMTIDSLKVE
YTDSTVAQAVNVTFGSLQIDNQLHDALFPVILQPTPLGKQSGNVGALPTIQASIIWLKDQ
AHGVLFVKYCSVLIQALTIEADEDLLFAIYDLTQIKGASWEIDSPDVLIANPGAISDPTV
SSMGQELYFEVLELQPIKLSLSFMRTERVSSETRLSLRNPLAVLVNALTMAVGNINDAPL
EMNALGIKDMRLTTSDLQNRIFYHYRQDVLRQLYRILGSADFIGNPVGLFTNVSSGVADI
FYEPFQGVVMHGNRELGIGIAKGAASFVKKTVFGLSDSLTKFTSSVGKGLSAATFDSEYQ
ARRRMTQRRNRPRHAIYGVAAGGEALASSVTSAMEGVFMKPIEGAETEGALGFFKGVGKG
LVGAVTKPVVGVFDLASNVSEGIRNTTTVFDNPERDRVRVPRLTPADGVLKPYSSREAQG
QYWMRDLNNGAYRKDFYVAHINSPTGDNVVLLTQSKVLSFYSRKLRLDWELPFNQIQGVT
AEDNGIRFAHRLGRAHDKFALIPDKAAQTWFFNQVAAVVRSFNARRRMDA
NT seq
9333 nt
NT seq
+upstream
nt +downstream
nt
atgagatcggtacaaaccttttcgcagctctttaacaggattctggctccgtatgtcgag
aatttggacttgaatcaggtcaactatggtatcgcccaaggtcagttgaccttgaggaac
ctcaggctgaagcgtggcgtgcttgacaagtttcagctacccgtcgatgtgctagagggg
catttgggcgaattcacgctctcccttcactggatgaatcttggaaatcagcctgtcgaa
atcttaattaaagacgtctacctacttgtggtcccctccgcccaaacgaatgttagcccg
gaggaagaagaggcccgcgcacaggctgcaaaggctgagcgtttagagaacgctgagcta
ctgcacatgaaagggcaggcggaaacacaatcagaatcaccccaaactcagggtttgatc
cagtccctcatcactaaagtcattaacaacgtgcaagtcaccatctgcaacattcacatc
cgatatgaagataacgtcagcgttcccgggcacccattcgcagccggcgttacccttgca
ggcttcgcggcagtctcagtgaacgagaaatggcaacctgtcttcatcgagagtactgct
ggtgccattcacaagctcgccaaacttgaatcactcgccgtatatgtggataccgatgct
aaaagcatgtcaggccttcccagaaacgaggcaattgaacacttctcagccatgatcgac
gacaaggacggacgatggaaccaccaatatatcttgaaacccgtatcaggagaaggaagg
attattgtcaatcacaaaattgaccggaataccccccggttcaatattgaactcttgttc
gatgaaatcggtgtagccctcgataatgaccagtaccgtgacgccatctccctcatcgac
atgtatcatgtctacatgcggaagcatcagtatcgcaagtaccaaccgtcgaaggaggaa
atagcccaatctccggccagagcaagactacgatatgcggcaactgcaatccttgcagga
gtgcgggagaagaggaggaagtggacctggcagtactttgccgaaaggcgcgatgatcgc
aatcgctatgtggaattgtttcaaaaaaagcttttggcttcgctggtaggagaggaatta
tcagcaatcgagaatctagagaagaaactctcttatgaagacattcgcttctaccggtct
atcgcacgatcgcggctgcgtaaggaccaggaactcaggaagaaaatcgaagcagagaag
aagaagcagcaaagccaaaagcaaggatggggctcatggctgtggggctcaagctcggaa
acacccaaggaagcatctatctttggagagaatatgaccgaagagcagcgaaagcaactc
tacgacgtcctggattatgacgaaaagtcctctcttatggaggccttgcaagcgccgcgg
gactcgctcaagatgcaggttactgccaagttaaagagagggtcctttacccttcggacc
gatcctcatggcgaatgcagggaaatgatgtctgtcgtcttcgacgtcttcaacgccacc
ttcatccagcgccacggcaatttcgaaacgacggtatccttacaagaccttcgggttttt
gacggaacgactgagaatacgctgtatcctcagattgtccgtgtgaagcgagacgtcgag
aggatccatacggccgtggaagagattgaacaaaattccagcgatattggcgcagagacg
gaggaacctttcttcttcatcaagttcgagaacaatcctttggatgacagagccgacact
gctctcactattcgcatgcgacacatggagatcatctactacaaaggttatgtggaagcc
gtctacaagttcttcaaaccaccggcgagccaattggaatctgtggaagctctattgaac
gcggctagtcagactctggaggggctgcgtaaagagacccgtgctggtctcgagtatgca
ttgcaaacgcacaagaccatcgacatccaggtggacatgaatgcccccgtcatcattgtt
ccagaggacatcactaccaccgaatgcactcacctcatagtcgatgcaggccatatcgct
gtcgagagcgagctgggcgacaaaaaggctatccacgatattcaccagaagcgcaaccaa
cagtacacggatgaagactatcgcaggctcgaatcgttgatgtatgataagctttccctt
aatctgcaagatgcccagttcatccttggtaaaaacctgaaggagtcgcggaatgctatg
gtcaatccatctagcgataatctccaccttctggagaaaatcagtatcgggcttcaaatt
caaaagtcaatcgtgccatccgccgccactctcacgcagttcaaggttcttggcaatttg
ccttctttgcagcttaatctttcggacatgaagtaccggtcattgatgcgcttaatcgac
gtatgcattcccaagctggatgatacacccgaaggcgcggtggcccaacggcccatgcct
cacaggaggtcagcttctggatacaacctcccgagactcttcgaacccagcaatgaagag
tataatgtcgacgatggtgagggaactgacgatggttcggatgacaaggaacagttcttt
gaagcggatagcggttcttcggagcctcaactacaccagcgcgccttcgagcttgaattc
cgagtcggaacacttcgcgcttctctttccaagaccaatcgagaggatattgagaaacca
ctaggggagctgtctctggaaggctttgcgctctcctttgctttgtacaagtaccacatg
gacgtggacgttacattacgctccgtttccaccgacatcattcagaacgatggggccatc
aaccttatctcaacgcctaccgacgtctcagggtcacccgatctcctcaaagtcaaatat
tcccgcgcgcagcgagagtcgcctgaattccagcctgtctatgaaggtatcgatcagaac
atcgacgtaaagatgtccacattagtcttccgagtcgcaccagaaccgatactggcgact
tatgatttcatcataactacatttgtaccacagaacacccccaatgacgcttcaacgaat
ggagcttcattagacgctttagggtcagaacatgcggtccaacaagccgcggacgacggc
aaaattcgcgtgctggtgaagctcgagggagtaaagatggtcattgagaatgattccaac
gtgctggcaacgctcaatctctccgtcgccgacgtggctgtcttccttcggggcccaacc
cttcgtgtctctgggcgcctaggtgatctcttcctcacgaacgacaacgaccgctatgct
atcctccctgaattcaatcgactactctcgatcgagggccagaatttcgctgactttgta
tatcaaacatacgacccttgtgatgaaaactatgcaggcatcaggtcgtccttcaaactc
aacgcagcgtccctcaaagtgaacttcctggaaggacctttgcactcactctacgtcttc
ctcctcaagctcgctcgcctcaaatacctctacgacgccgcgacgtcggctgctgttcag
actgccgcggaaatggacagaactcaattcgacatctctatcaagacaccaatcctcgtg
ctcccaacagacccttctcagtcccttgatgtcatgaccatgcgactaggacatatcgag
gccagaaattcttttgaagacgcgacgaacaagattgcagccagccttcacggaatcaaa
ttggaatctctgtttcatgacgcagagaaacagccgcactcgctcaagatcattgacaac
atcgatgttgacgctgagatagcgcaaacggttgggatagaacgcgaggaggacactgtc
cgcccagatactcagatttctgtaaaggtgtctgatgtcaaacttcacctgacgcagcga
cagtatatgctcttgatccaactttctcactctataccacggaccttctctgacaccctc
gattcctcagagaaatcggcactcgagcaagttggtggcgggacagaggctgaacgtcgt
ctcgaaagaccgatggtcaatctccagccagagcttcgaactggctctgaggggtctgtt
gtctggacagcactcgacttggtggtcactatcaacgccgtcaaactacacctatacgac
ggctcagtgatttccgaggcccagcaaaaggaacatggaattgtccgatttgctctaaac
gacaaaactctacgcttaaaacagttgaacgacggttcaatggaggctcaagtcatcctt
cgatcgttcactatgagtctcacccgccctggtcccacaaggttcagagaaattatccca
gcagctcaacatgatcgaaaccagttcatgattttgtacacgtcctcggcatcgacttca
caagcagtcttgaccatcgactcccctcaaatcatctttgcagtcgacccagtctttaga
ttgacccagttctttaccagccctttcgaacaatccagaggctacaccgaagaagggatg
ggaaacaacgatgtctcagcgaacgacgcggcaagtcaattggattttagagttgacctt
cacgaagtgtcaatcagcgtactcgaaaatgatgcggatccaaacacccgtgccattcgc
ctttatatcaaccaaatcctgttctcgcagcagggaatcatggcactcaatatacaacga
cttgggatgtctctgattcaaatgggccgacacaccgaaagtgcccgcttcctcgacgac
gtagatttgacagtctccctggatacccgttcctcagctgcccaacaaatgaccagcatt
gagatcaacgccaaaccaatcgtattccgagcatcttatcgcgacatcaatttaattact
accatcgtcaacaaggctattgagctgtacgccaactccccgtcagcgagcgaacattca
aaccacgacccaagctactccattgacagggcgatccagggacgaaaggctgaaacaagt
gtcattcatgcatccgccgcctcgaagaccgccgcaatcggcaaagcgagggtcatgatg
tccaaggagcaattgcgagcgtctttcgatgggttccgtcttattcttatcggggacatg
cacgaacaaccaatgctgcacctcaaagtcaagccgttcattgtcggtgcaaaagattgg
tcaggagcgctgcatgcgacgacgaccctcgctacccagatcacctattggaacttgacc
aattctcattgggagcctctgattgacccatggactttcaccattcgcgtctcgaaagac
agtcctacagggagcatgaacgtttctctctccgctagcgagaaactcgacataaatctt
agcacaacattcgtcgagctggccttaacaactgtcaacacttggagcaaggaaggggca
gaagttcttcagaagcctcgtggcgtctatgcaccatatcgcatcaggaattgcaccggc
acaccagttgttgtctggtctgacgcagagcacaacgcacagttgagtgaagatagcaag
gttaagattgccaacaatcagatcgtagattggaggttcggagattggagaacaacgcga
gagcacgtatcctcagggcagcacaccattgctatccaattcactgaacataactgggag
gcattgaaggggatcccggtcgaacgtgaaggggaatacgtcttctccttacggcccagg
acagaaaaatatcccactcgcgttctgtttgacgtgaaagtcgtcgacaataccaaaatc
gtcaccatcagatcgacttacaagatcgaaaatctgaccctatacccattagagttgatg
ctcatcgatgagcatggacaaccagtgaactccctggagagggtacctcctggacacgac
tatgccctccccattgatgcagttactaaaaacaaagtccggatccaacctgatcagggt
ttcggctacaaatggtgccatcctttgcgctgggaggatctgattgcaaggaagggcttc
accatcaagtgtgcccacagtgatccgaaggaagctgcgttcaggttccaagcctgggta
cagacggacagcaatgacatcgccactgggaaaaacccgaaaatcaatcttcgcctccga
gctcctctcgagttagagaatttattgccgtataatcttgaatacaggatctatgacaag
aacactgatcagaactggcgaagctacctgcgtaagggtggcgtcatgcccatccattct
gtcgagcttggacattttatccttctgaatgtcacgctccaagacagcgtgttcaaaccc
agcgaattcgctattataaacacagatggccactctgactttgacatcgagaaacgcctg
acgttgcgagaccgtcaagataggaaactggacttgcgtctgaactatactcgttaccct
gaatcaggtggcgcatttaaggttcaaatctatagtccctacatcgtcatcaacaagacc
ggattgccattctctgtaagatcgacaaggtcaactcgggcgggctaccaggaagcagcc
ggggatacgcaaccagatactactcgaacctctgcgccattccgtaggtcattcgcgatc
gttggtggccatgtcactcaccccttggtagtgctctctcactcacataccgacggccat
gaattcatcttcaaatttggcgaatcgacctggtccaagatgatctccctagaggctccg
tctgccgagacggaggtgtccgtctttaccccgagaaactcaccggaccaactctttact
gggttgtcctggagtgaaggacagggcaaatacaaactcacaaaggtcatagtcctgacg
cctcgtttcctgatccgaaacaacctttcttatcccattgttttccgagagcacggcgtg
atccctcgagaacgtgctgtaattccccccggtgaaagggcagcattgcgtgtccttcgt
tcgtctgaggacaagttgctgaccattgcctactctgggatcaatgcgcaatggacgcca
ccgatctccctggaagacataggctccgtctacgtccgcctggcacgcgatgggagtata
actgacctcgttcgtgcagacgttgttatcgaaggatctaccattttcgttcttctgtcg
caatccgacgagtggccatttgtgatcgagaacgagactgattgccggtttgagctgcgc
caaaaggatgagtcaagagatggaaaggaccagccgggctatgccgtgccgcccttttcc
aaggtgcaatacgcatgggacttccccgcagccaaagagaaaaggcttgttctttccacc
aaaacctcgcgacgcgctatcgacatcatggagataggtgacctcatgcccttcaagttc
atggacaacaataaaagtcgggccgtatccctcgatgttcgcgcagatgggcagaagcaa
gtcctccggatatcgaactacaacccagagcatagtctttatcgcccgcgacagaggtct
ggttctgtcaatgtctcgaggcaagataccatctccagcgcggaaggcttcgaagcgatc
actgaggctgtcacgaccaccttcacatttacattggaatggtctggaatcggcctctcg
ttggtcaacaagcgtttggttgaagtgatatatatgacgatcgacagcctcaaggtagaa
tatacggacagcactgtcgcgcaggccgtcaacgtgactttcggctcccttcaaatagac
aaccaactacacgatgcccttttcccagtcatccttcaaccaacgccccttgggaaacag
tcgggaaatgttggcgcccttcccaccatccaggcttccattatctggctcaaagaccaa
gcccacggagttctattcgtcaaatattgctcggtcctgatacaggctttgacaatcgaa
gccgatgaagacttactgtttgccatctatgacctcacccagatcaaaggggcgtcttgg
gaaatagattcccctgacgtcttgatcgccaacccaggagcaatctctgatccaaccgtc
tcatcgatgggacaggagctctatttcgaagtcctagagcttcagccaattaaactttcg
ctctcatttatgcgcacagagcgggtgagcagcgagacgagactgagtttgcgcaaccca
ctggccgtacttgtcaatgcattgacaatggccgttggcaatatcaacgacgccccgttg
gaaatgaatgctctaggaattaaggacatgcggttgacgacgtcggacctgcagaaccgg
atattttaccactaccgccaggatgttttgcgccaactctatcgaatcctgggctccgcc
gatttcattggaaacccagtgggactcttcacgaacgtcagttcaggggttgccgacata
ttctatgaacctttccaaggtgtcgtcatgcatggaaacagagaattggggataggtatc
gcgaagggagccgcaagtttcgttaagaagaccgtcttcggtctcagcgatagcttaacc
aaatttacaagcagcgttgggaaaggcctgtcggctgctacatttgattccgaatatcaa
gctcgacgaaggatgacccaacgacggaaccgtcctcgacacgccatatacggagtggcc
gctggaggcgaggccctagccagcagtgtcaccagcgcgatggaaggagtatttatgaag
cctatcgaaggtgcagaaacagagggtgccttgggattcttcaagggtgttggcaaaggc
ctcgttggtgccgtcacaaagcctgtagttggagtgttcgaccttgcatccaatgtctcc
gaaggcatccgaaacacaacgaccgtattcgacaatcctgaaagggaccgcgttcgagta
cctcgtttaacccctgctgacggcgttctcaaaccgtattcttcccgggaggcgcagggt
caatactggatgcgcgacttgaacaatggtgcttacagaaaagatttttacgttgctcac
atcaactctccaaccggggacaatgtcgtgctactgacgcagtccaaagtgctttcattc
tactcgaggaaactgcgactggattgggaactgccattcaatcaaatccagggcgtaacc
gctgaagacaatggaattcgtttcgctcatcgactgggccgtgcacacgacaaattcgcc
cttatccccgacaaggccgcccaaacctggttttttaaccaagtggccgctgtagtacga
tcttttaacgctcgccgacggatggatgcatga
DBGET
integrated database retrieval system
