Coprinopsis cinerea (gray shag): CC1G_11509
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Entry
CC1G_11509 CDS
T01275
Name
(RefSeq) transcription initiation factor TFIID-1
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
cci
Coprinopsis cinerea (gray shag)
Pathway
cci03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cci00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CC1G_11509
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cci03000
]
CC1G_11509
03021 Transcription machinery [BR:
cci03021
]
CC1G_11509
Transcription factors [BR:
cci03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
CC1G_11509
Transcription machinery [BR:
cci03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
CC1G_11509
RNA polymerase III system
TFIIIB
CC1G_11509
RNA polymerase I system
SL1/TIF-1B
CC1G_11509
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
DUF4295
TMEM51
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
6010213
NCBI-ProteinID:
XP_001833724
UniProt:
A8NHA9
LinkDB
All DBs
Position
2
AA seq
308 aa
AA seq
DB search
MSFALPARQITFGRTNAQSQQQQHTFHQQQQQQQQQQQQQQQLQYQPQNNGLALPAGAYS
HQPPTTAASSSSLPGPSPLATNSYTAAQLQKQPAASTSTNAVAGPSSPPAAPSPSTPLTL
EQQHITAVEGIVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTT
ALIFASGKMVVTGAKSEDDSRLASRKYARIVQKLGFDAKFSEFKIQNIVGSCDVKFPIRL
EGLAYSHGQFSSYEPELFPGLIYRMIKPKVVLLIFVSGKIVLTGAKVREEIYTAFNTIYT
VLCEFRKP
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtttgccctgcccgctcgccagattacctttggtcgaaccaacgctcagtctcag
cagcagcagcacaccttccaccagcaacagcagcagcagcagcaacagcaacagcaacaa
cagcagttgcaatatcaaccccagaacaatggtcttgctttacctgctggcgcctattca
caccaacccccgacgaccgccgcttcctcctcatcgctgccagggccctcgccgctagcc
accaactcctacaccgcggcccagctccagaagcagcctgcggcgtcgacgtcgacaaac
gctgttgctggtccttcgtccccacccgcggcaccttccccatccacgccgttgaccctc
gagcagcaacacatcaccgctgtcgagggcatcgtgccaacgctgcaaaacatcgtcgct
acggtcaatctggactgcaggctggatctcaagaccatcgcgctgcacgcacgcaacgcc
gaatataatccaaagcgtttcgccgccgttattatgcgtatccgtgagcccaagacgacg
gctcttatcttcgcctctggcaagatggtcgtcactggtgctaaatccgaagacgactcg
cggctggcgtcgcgaaaatacgcgcggatcgtgcagaagcttggtttcgatgccaagttc
tccgagttcaagatccagaacatcgtgggtagctgtgatgtcaagttccctatccgtttg
gaaggtcttgcatacagtcacggacagttcagcagctacgaacctgagttgttccctggg
cttatctatcgcatgatcaagcccaaggttgtgctgctcatcttcgtgtccggcaagatt
gttctcactggcgccaaggtcagagaggaaatctacacggctttcaacacgatttacacc
gtactttgtgaattccggaaaccataa
DBGET
integrated database retrieval system
