KEGG   Coprinopsis cinerea (gray shag): CC1G_11763
Entry
CC1G_11763        CDS       T01275                                 
Name
(RefSeq) CDC5
  KO
K12860  pre-mRNA-splicing factor CDC5/CEF1
Organism
cci  Coprinopsis cinerea (gray shag)
Pathway
cci03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cci00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CC1G_11763
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cci03041]
    CC1G_11763
   03400 DNA repair and recombination proteins [BR:cci03400]
    CC1G_11763
Spliceosome [BR:cci03041]
 Complex B
  Other components
   Prp19 complex
    CC1G_11763
 Complex C
   Prp19-CDC5 complex
    CC1G_11763
DNA repair and recombination proteins [BR:cci03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    CC1G_11763
SSDB
Motif
Pfam: Myb_Cef Myb_DNA-binding Myb_DNA-bind_6
Other DBs
NCBI-GeneID: 6010054
NCBI-ProteinID: XP_001833557
UniProt: A8NGM3
LinkDB
Position
2
AA seq 822 aa
MVRIIIKGGVWKNTEDEVLKAAIAKYGKNQWARISSLLVRKTPKQCKARWYEWLDPSIKK
TEWSKTEDEKLLHLAKLMPTQWRTIAPIVGRTATQCLERYQKLLDEAEAKDNEELGLTGP
DDAGKSIEDIRRLRPGEIDPDPETKPARPDPIDMDEDEKEMLSEARARLANTQGKKAKRK
ARERQLEEARRLAVLQKKRELKAAGIIMRSKTKKKGMDYNADIPFEKKPAPGFYDTSEEQ
AKVAAAPVGQSLRRLENKRKPEEEELERKKRQRRNEKEGGGQTKFVPAREAQIQKLKEAE
SIGRRRKLVLPGAQVGETELEEIVKIGQAGENAKALVGGGSDASGKLLSDYDGLDAARSA
RTPRTAPQQDTVLMEARNLRNMTIAQTPLLGDENTPLHIAPGGGTGFEGATPRHQVAFTP
NPLATPYRTEGGGDVGATPRGVVGATPLRTPLRDNLAINPADQGSQMNAAKRALRAGFSS
LPKPENNFELLVPDDEEVEPEAGAAVREEDAAERDARLKRMREEEERKALARRSQVLQQG
LPRPANVDPAALLQRLSLDDEGMEREAAQLIYAEMVDLMKHDAITNPLPGTMTPGSAQST
YVIPPDEDLAKAKDVIHKELAGMVGFPNANPAQVHEGLVAVARNEIGDGGEDGSWASIRA
GLVLHPKLRTLVKPETLSLEERVEGYGLLLNDYREAMTKLATRAAKTEKKLGVVLGGYQA
RGRALAKRLVDAFAEIQQTTVDLRSFERLRANEAVAGPQRVVLLKEEVDKLEGRERALQM
RYAELDRERKEAEERVAVLEDKVMAAAEAFNEAQLAAMEEDS
NT seq 2469 nt   +upstreamnt  +downstreamnt
atggtcagaataatcattaaaggaggtgtatggaagaacaccgaagatgaagtcctaaag
gctgctatcgccaagtacggcaagaaccaatgggcgcgtatttcttcccttcttgtccgc
aaaacgcccaagcaatgcaaggcgcggtggtacgaatggctggacccgtccattaagaag
accgagtggtccaaaacagaagatgagaaactccttcatctagcaaagctcatgcccacg
caatggcgcaccattgcacccattgtcggtcgaaccgcaactcagtgtttggaacggtac
cagaagttgttggacgaggcagaggcgaaggataatgaagagctggggctgacgggtccg
gacgatgctgggaagagtatagaggacattaggaggttgaggccgggagaaatcgaccct
gaccccgagacgaagcctgcgaggcccgacccgatagacatggacgaggatgaaaaggag
atgttgtcggaagctcgtgcacgtttggccaacacccagggtaagaaggcaaaacggaaa
gcgagagagaggcagttggaggaggcgcgtcggttggctgttttgcagaagaagcgtgag
ctcaaggctgctggtatcattatgcggtccaagaccaagaagaagggcatggactacaat
gcagatatcccattcgagaaaaagcccgctcctggcttttacgatacctcagaagaacaa
gccaaggtcgcagccgcccccgttggccagtcccttcgccgtctggaaaacaagcgcaaa
ccggaagaagaggaacttgagagaaagaagaggcagaggaggaacgagaaggagggtgga
ggccaaaccaaattcgtcccagctcgtgaggcacagatccagaagcttaaggaagccgaa
tctattggtcgaagaagaaaactcgtccttccgggcgctcaagtcggagaaaccgagttg
gaggagattgtcaagattggccaggctggagaaaacgctaaggcattggttggcggcgga
agtgacgccagtggcaagctattgagcgactatgatgggttggacgctgctcgaagtgct
agaacaccgcgaactgcccctcaacaggataccgtactcatggaagctcgcaatctccgc
aacatgacgatcgcccaaacacccctgcttggcgatgagaatacccccttgcatatcgcg
cccggcggtggtaccggctttgaaggtgctacgcctcgccaccaagtcgcgttcactccc
aacccccttgcaacaccctaccgtactgaaggtggtggtgatgttggtgcgacacctcgc
ggcgtcgtgggggcaacccctctccgcacgcctctccgcgacaacctggcaattaaccct
gcagaccaaggctcgcaaatgaacgccgcgaaacgagccctgcgagccggtttctcgagc
cttcccaaacccgaaaacaactttgaacttttggtccccgatgacgaagaggtggagcca
gaagctggtgctgcagtcagagaagaggacgccgcggagcgtgatgctcgactgaaacgg
atgcgtgaagaagaagagaggaaagccctcgcccgccgatctcaagttttgcagcaaggc
ctacctcgaccggccaacgtggaccctgccgcgctgcttcaacgactctcgttggatgac
gagggcatggagcgggaagctgctcaattgatttatgcggagatggttgatcttatgaag
cacgatgcaatcacgaacccgctgcctggtacgatgactcctggaagcgcgcagtcgaca
tatgtgatccctccggatgaagacctcgcaaaggcgaaggatgtgattcataaagagttg
gcagggatggttgggtttccgaacgccaacccggcgcaggtgcatgaaggattggtcgca
gttgcgaggaatgagatcggagatgggggagaggatgggtcgtgggcctcgattcgtgct
ggattagtcctccaccccaagcttaggacgctggtgaaaccagagaccctgagccttgag
gagcgcgtggagggatatgggttgttgctaaatgactaccgggaggcaatgaccaagttg
gcaacgagagctgcgaagacggagaagaagcttggtgttgtgcttggtggatatcaagcg
cggggacgggcgcttgcgaagaggttggttgatgcgtttgctgagattcagcagacgact
gtggatttgaggagtttcgagcggttgagggcgaatgaggctgttgctgggccgcagagg
gtggtgttgttgaaggaggaggtggacaagttggaggggagggagagggcattgcagatg
cggtatgcagagttggatcgggagaggaaggaggcggaggagagggtcgcggtgttggag
gacaaggtgatggctgcagccgaggcgttcaacgaggcccagcttgctgccatggaggag
gactcgtag

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