Coprinopsis cinerea (gray shag): CC1G_12071
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Entry
CC1G_12071 CDS
T01275
Name
(RefSeq) CGI-48 family protein
KO
K14553
U3 small nucleolar RNA-associated protein 18
Organism
cci
Coprinopsis cinerea (gray shag)
Pathway
cci03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cci00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CC1G_12071
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cci03009
]
CC1G_12071
Ribosome biogenesis [BR:
cci03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
CC1G_12071
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40_Prp19
WD40_CDC20-Fz
LAIKA
DUF2415
Motif
Other DBs
NCBI-GeneID:
6004758
NCBI-ProteinID:
XP_001828341
UniProt:
A8N0E0
LinkDB
All DBs
Position
1
AA seq
804 aa
AA seq
DB search
MAKHPRKRQKTSKDDTAVVIDKKQANLERLLDDSTKDDEERRLESMLFGTKYVPRKGKER
EMFGGDDEDDEEVTLDLGDASLDESRGLAHLGDQDLFFVDDGNEDPAGSSPPPQTQDSDE
SDDDEDDDQGRGQSEPLPEPTPDPPAPSWIKSTKKRSAWTDPADATLAGGVSLLTARRRK
LRQAVDEDKVTIQEYETRLRRQFEAINPEPEWAKKARKVVREEAQAVADEEDPLAVLSST
NGILKSSKRRGGKVTLAKGEIKLERLRDVNQSVQDSGSGEVRVVTFHPSTTASILGVATA
DRRIRLFNVDGHLSPLLTTLHFPNLPMTSPTSALFHPSGDTMLISGPRPFFYTYDLPSGT
PTHHARGLWGTTFNNIMDSSATLQRRRKRDRAGNAGGGGGGGNGDGEALSLTSFSTHGDM
LAVAGRGGYVHLVDWKTGAGQVIGSLKCSSAGGGAGAGGIQGMWWIPPGFSDGGVNGVLG
GEDGAASAGANSKLAVLTGDAEIYIWDVGQRRCVKRWQDEGGFRSAAKVLAGSSGGAGYL
AVGSNTGYVNVYGSEAFNEHTGKPKPLKAIANLTTPISSARFNYDAQLLAIASKEKKDSM
RLVHLPSLTAYANWPTSGTPLGHVTGIDFSPRSELLFLNWMSCFFQILKPRTPRNTSFES
NSQKVITPVHIPFVDVELGSGIQVYTAWPVLHPMIVLNVQVPRLNMYSRVVLLATPFMIK
LRGSSRGPAGAGSGSGLVWDGAEGKDRTGHGHIIIYDNAVHFGSTHPTGRTNHTNRMRGS
GQLFSLADTDLETGPSSFKLSPES
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atggccaaacacccacgaaaacgccagaaaacgtcaaaagatgatacagcggtggtgatt
gacaaaaaacaagccaacttggaacggcttttagacgactcgaccaaggacgatgaagag
aggaggttggagagtatgttgtttgggacaaagtatgttcctaggaaggggaaggagagg
gagatgtttggtggtgatgatgaggatgatgaagaggttactttggaccttggagacgcg
tctctagacgaaagtcgaggattggcgcatttgggcgaccaggatcttttcttcgtggac
gatgggaacgaagatcccgctggttcttcaccaccaccacagacccaggactctgacgaa
tccgacgacgacgaagacgatgaccaaggacgcgggcaatctgaaccactccccgaaccc
acacccgatccacccgccccatcctggataaaatcaacaaaaaagcgttcagcatggaca
gatcctgcagacgcaacccttgccggcggcgtctccctgcttactgctcgccggcgtaaa
ctacgacaagccgtggacgaagacaaggttacgatccaggaatacgagactcgcctgcga
cggcagtttgaggcgattaatcctgagcctgagtgggccaagaaggcgcgcaaggtggtt
agagaggaggcgcaggctgttgctgatgaagaagaccccctcgccgttctctcttcgacc
aacgggatcctgaaatcttccaagagacgaggcgggaaggttaccctcgctaaaggcgaa
atcaaactcgaacggctacgagatgttaaccagtcggtgcaagactcgggtagtggagag
gtccgcgtcgtgactttccacccgagcaccacagcgtcgattctgggagttgcaaccgcc
gacagacggatacgattgttcaatgtggacggacacttatctcccctcctcacaacgctc
cacttccccaacctcccaatgacatcccccacatccgctctcttccacccctcgggcgac
acaatgctcatctccggcccccgccccttcttctacacctacgacctccccagcggcaca
cccacacaccacgcccgcggcctctggggtacgaccttcaacaacatcatggactcttcc
gctaccctccaacggagacgcaaacgcgaccgagcaggcaacgcgggcgggggtggaggt
gggggtaacggcgacggcgaagccctctccctcacctccttcagcacccacggcgacatg
ctcgccgtcgccggaaggggcgggtacgtccacctcgtcgactggaaaacgggcgccggg
caggtcatcggtagcctcaaatgctcgtctgcgggtggaggcgccggggctggcgggatc
cagggtatgtggtggattcctcctgggttctctgacggcggagtgaatggggttctggga
ggagaggatggtgccgcgagtgctggtgccaactcgaaattggcggtcctcacgggcgac
gcggagatctacatctgggatgtgggccagcgcagatgcgtgaagaggtggcaagatgag
ggtgggtttaggagtgctgccaaggtgttggcgggtagttccggtggggctgggtatctc
gctgtaggatcgaatacgggctatgtcaacgtatacggttcggaggcgttcaacgaacac
accggcaaaccgaaaccattaaaagcgatcgcgaaccttacgactccaatttcgtctgcc
agattcaactatgatgctcagctgcttgctatcgcgagtaaggagaagaaggattccatg
cgtttggtccatctaccatctttgactgcctacgccaactggcctacttcgggaacgccc
ttgggtcatgttactggaatagacttttcgccgaggagcgaacttctctttctgaattgg
atgtcgtgtttctttcaaatacttaagccccgtactcctcgcaatacttcattcgaatct
aactcgcagaaggtcataactcctgtacatattccattcgtggatgtcgaactgggctca
ggtattcaggtatacacggcttggcccgtcttgcatcccatgattgtactgaatgtacag
gtacctcgattgaacatgtactctcgagttgttctacttgctactccctttatgattaag
ttacggggctcatcaagaggtcccgctggtgcgggctcgggcagtggtttggtttgggac
ggcgcggagggcaaggatcgaacgggccacggtcatatcataatctatgataatgcagtc
catttcggctcaacacacccaactggcaggaccaaccacacgaaccgaatgcgtggttca
ggccagcttttcagtcttgcagacaccgatttggaaaccggcccctcaagcttcaagttg
tctcccgagtcctag
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