KEGG   Coprinopsis cinerea (gray shag): CC1G_12434
Entry
CC1G_12434        CDS       T01275                                 
Name
(RefSeq) hypothetical protein
  KO
K12586  exosome complex component RRP43
Organism
cci  Coprinopsis cinerea (gray shag)
Pathway
cci03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cci00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CC1G_12434
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cci03019]
    CC1G_12434
Messenger RNA biogenesis [BR:cci03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     CC1G_12434
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 6015766
NCBI-ProteinID: XP_001839162
UniProt: A8P6I1
LinkDB
Position
5
AA seq 237 aa
MDETPSLSHGHNPLNLTSTFPHRPSLTYSIHHPQTRKTVPNLDLPALCSPKFKPGPPTDE
SQVLSDRLNEALVTYVCLPSYIHLAYGLHICPGLSLPTQRTTTFFFPTTPPNQTPNPALQ
NTLKHNNSANTLPLESLCIQPNKSVWTIYLDAICINYDGNAFDAALMAMVLALKNDPTSF
EEPLLNDTLTIIMDDKAEFISVSHLGVGSTKHEDALSYCMEQAKERHAAVFKTIYSS
NT seq 714 nt   +upstreamnt  +downstreamnt
atggacgaaacaccctctctttctcatggacacaaccctctcaatctcacttccactttc
cctcatcggccatccctcacatactcgatacatcacccccaaacccgaaaaacagtacca
aacctcgacctccccgctctctgctcgcccaaattcaagcccggcccaccgacagacgaa
agccaggttctctcagataggctgaacgaggctcttgtcacgtacgtctgtctcccatcc
tatatacacctggcttatggtttgcatatctgccctggcctttccttgccaacccaacgg
accacgacgttcttcttcccaaccaccccaccaaaccaaacacccaatcccgccctccaa
aataccctaaaacacaacaacagcgccaacaccctccccctcgaatccctctgcatccag
cccaacaaatcagtctggacaatctacctagacgccatctgcataaactacgacggcaac
gcattcgacgctgctctgatggctatggtgttggctttaaagaatgacccaacatccttc
gaagaacccctcctcaacgacacactcaccatcatcatggatgacaaagcagaattcatc
tccgtctcccacctcggcgtcggatccacaaaacacgaagacgccttgtcctactgtatg
gaacaagcaaaggaacgacatgctgccgtgttcaaaaccatttactcttcttga

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