KEGG   Coprinopsis cinerea (gray shag): CC1G_12569
Entry
CC1G_12569        CDS       T01275                                 
Name
(RefSeq) Poly(A)+ RNA export protein
  KO
K14298  mRNA export factor
Organism
cci  Coprinopsis cinerea (gray shag)
Pathway
cci03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:cci00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    CC1G_12569
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cci03019]
    CC1G_12569
   03036 Chromosome and associated proteins [BR:cci03036]
    CC1G_12569
Messenger RNA biogenesis [BR:cci03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     CC1G_12569
Chromosome and associated proteins [BR:cci03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    CC1G_12569
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 Beta-prop_EML_2 WD40_Prp19 WD40_CDC20-Fz WDR55 WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_1st EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_2nd ANAPC4_WD40 Beta-prop_RIG_2nd Beta-prop_HPS5 WD40_Gbeta Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_Vps41 WDR90_beta-prop_4th Beta-prop_EIPR1 Beta-prop_RSE1_2nd Beta-prop_WDR75_1st Beta-prop_Aladin Beta-prop_SPT8 NBCH_WD40 WD40_RFWD3 Beta-prop_IFT140_1st eIF2A RMC1_N Beta-prop_IFT122_1st WD40_like Beta-prop_VPS8
Other DBs
NCBI-GeneID: 6012929
NCBI-ProteinID: XP_001836388
UniProt: A8NU67
LinkDB
Position
4
AA seq 353 aa
MSFFGATTSTTAASTAADKDVEVAEPPTDSISSVSFSPQADYLAVGSWDNSVRIYEVGPQ
GQTQGKAMYQHQGPVLDVCWNTDGTKIFSGGADNAGRMFDVTTGQATQVAQHDAPIKVVG
WVNAPQAGVLATGSWDKTIKYWDLRTPNPVATVTLPERCYTFDIQYPLMVVGTAERHIQI
YNLNSPNTVFKNLTSPLKWQTRVVSCFTASQNSGFAIGSVEGRVAIQYVEDKDSSNNFSF
KCHRRDSVPNSKDQAMVFAVNDISFHPVHGTFSTCGSDGTIHFWDKDARTRLKTFEAAPG
PISTTAFNRNGTLFAYAISYDWSKGHSGMTPGHPNKLMLHQCKDEEVRKRNRK
NT seq 1062 nt   +upstreamnt  +downstreamnt
atgtcgttctttggagccaccacgtcgacaacggcggcttcgactgccgcggacaaagac
gttgaagttgctgagccgccgaccgattcaatttcttcagtctcgttctcaccacaagcc
gactatcttgcagttggaagctgggacaatagcgtccggatatatgaagtcgggccccag
gggcagacccaaggcaaggctatgtatcagcatcagggccccgtcctagacgtttgctgg
aacacggatggaacgaaaatcttctctggaggcgcggataacgctgggagaatgttcgat
gttacgactggacaggccacccaagtcgcccaacacgatgctccaatcaaggttgtcggc
tgggtgaacgctccccaggctggagttttggcgaccggtagctgggacaaaaccatcaaa
tactgggacttgcgtactcccaaccctgtagctaccgttacacttccagaacgatgctat
acgttcgacatccaataccctttgatggtcgttggaaccgccgagcgacacattcaaatt
tataacctcaacagccccaacactgtcttcaagaatttgacctcccctttgaaatggcaa
actcgtgttgtgtcttgcttcacagcatctcagaatagcgggttcgcaattggaagcgtt
gaaggtcgagttgctatccaatacgtcgaagacaaagactctagcaacaacttctcgttc
aaatgccatcgccgagactctgtccccaactccaaagaccaagccatggtattcgcagtg
aacgatatttcattccatcctgtccatggcaccttctcgacttgcggttccgacggcacc
atccacttctgggataaggatgcacgaactcgactaaagaccttcgaagcagcacctggg
ccgatatccacgaccgccttcaaccgcaacggtaccctcttcgcctacgccatctcatac
gattggtccaaaggccactccggcatgactcccgggcaccccaacaagttgatgctgcac
caatgcaaggatgaggaagtcaggaagcgcaatagaaagtaa

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