Coprinopsis cinerea (gray shag): CC1G_12569
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Entry
CC1G_12569 CDS
T01275
Name
(RefSeq) Poly(A)+ RNA export protein
KO
K14298
mRNA export factor
Organism
cci
Coprinopsis cinerea (gray shag)
Pathway
cci03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cci00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CC1G_12569
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cci03019
]
CC1G_12569
03036 Chromosome and associated proteins [BR:
cci03036
]
CC1G_12569
Messenger RNA biogenesis [BR:
cci03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
CC1G_12569
Chromosome and associated proteins [BR:
cci03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
CC1G_12569
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
Beta-prop_EML_2
WD40_Prp19
WD40_CDC20-Fz
WDR55
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_1st
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_HPS5
WD40_Gbeta
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_Vps41
WDR90_beta-prop_4th
Beta-prop_EIPR1
Beta-prop_RSE1_2nd
Beta-prop_WDR75_1st
Beta-prop_Aladin
Beta-prop_SPT8
NBCH_WD40
WD40_RFWD3
Beta-prop_IFT140_1st
eIF2A
RMC1_N
Beta-prop_IFT122_1st
WD40_like
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
6012929
NCBI-ProteinID:
XP_001836388
UniProt:
A8NU67
LinkDB
All DBs
Position
4
AA seq
353 aa
AA seq
DB search
MSFFGATTSTTAASTAADKDVEVAEPPTDSISSVSFSPQADYLAVGSWDNSVRIYEVGPQ
GQTQGKAMYQHQGPVLDVCWNTDGTKIFSGGADNAGRMFDVTTGQATQVAQHDAPIKVVG
WVNAPQAGVLATGSWDKTIKYWDLRTPNPVATVTLPERCYTFDIQYPLMVVGTAERHIQI
YNLNSPNTVFKNLTSPLKWQTRVVSCFTASQNSGFAIGSVEGRVAIQYVEDKDSSNNFSF
KCHRRDSVPNSKDQAMVFAVNDISFHPVHGTFSTCGSDGTIHFWDKDARTRLKTFEAAPG
PISTTAFNRNGTLFAYAISYDWSKGHSGMTPGHPNKLMLHQCKDEEVRKRNRK
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttctttggagccaccacgtcgacaacggcggcttcgactgccgcggacaaagac
gttgaagttgctgagccgccgaccgattcaatttcttcagtctcgttctcaccacaagcc
gactatcttgcagttggaagctgggacaatagcgtccggatatatgaagtcgggccccag
gggcagacccaaggcaaggctatgtatcagcatcagggccccgtcctagacgtttgctgg
aacacggatggaacgaaaatcttctctggaggcgcggataacgctgggagaatgttcgat
gttacgactggacaggccacccaagtcgcccaacacgatgctccaatcaaggttgtcggc
tgggtgaacgctccccaggctggagttttggcgaccggtagctgggacaaaaccatcaaa
tactgggacttgcgtactcccaaccctgtagctaccgttacacttccagaacgatgctat
acgttcgacatccaataccctttgatggtcgttggaaccgccgagcgacacattcaaatt
tataacctcaacagccccaacactgtcttcaagaatttgacctcccctttgaaatggcaa
actcgtgttgtgtcttgcttcacagcatctcagaatagcgggttcgcaattggaagcgtt
gaaggtcgagttgctatccaatacgtcgaagacaaagactctagcaacaacttctcgttc
aaatgccatcgccgagactctgtccccaactccaaagaccaagccatggtattcgcagtg
aacgatatttcattccatcctgtccatggcaccttctcgacttgcggttccgacggcacc
atccacttctgggataaggatgcacgaactcgactaaagaccttcgaagcagcacctggg
ccgatatccacgaccgccttcaaccgcaacggtaccctcttcgcctacgccatctcatac
gattggtccaaaggccactccggcatgactcccgggcaccccaacaagttgatgctgcac
caatgcaaggatgaggaagtcaggaagcgcaatagaaagtaa
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