KEGG   Coprinopsis cinerea (gray shag): CC1G_13677
Entry
CC1G_13677        CDS       T01275                                 
Name
(RefSeq) hypothetical protein
  KO
K11097  small nuclear ribonucleoprotein E
Organism
cci  Coprinopsis cinerea (gray shag)
Pathway
cci03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cci00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CC1G_13677
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cci03019]
    CC1G_13677
   03041 Spliceosome [BR:cci03041]
    CC1G_13677
   03032 DNA replication proteins [BR:cci03032]
    CC1G_13677
Messenger RNA biogenesis [BR:cci03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     CC1G_13677
Spliceosome [BR:cci03041]
 Complex A
  U1 snRNP components
   Sm proteins
    CC1G_13677
  U2 snRNP components
    CC1G_13677
 Complex B
  U1 snRNP components
    CC1G_13677
  U4/U6.U5 tri-snRNP components
    CC1G_13677
 Complex C
  U2 snRNP components
    CC1G_13677
DNA replication proteins [BR:cci03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     CC1G_13677
SSDB
Motif
Pfam: LSM Hfq
Other DBs
NCBI-GeneID: 6018153
NCBI-ProteinID: XP_002912145
UniProt: D6RJV9
LinkDB
Position
1
AA seq 87 aa
MSSRQQRVMVQPINVIFKNLQQKTKVVIWLYDNIEMRLEGRIIGFDEFMNLVIDDAAEVY
VKDAKPRRELGRILLKGDNITLIQQAQ
NT seq 264 nt   +upstreamnt  +downstreamnt
atgtcgtcccgtcagcagcgagtgatggttcagcccatcaatgttatcttcaaaaatctc
cagcagaaaaccaaagttgtcatctggctgtatgacaacatcgaaatgcgtttggaaggc
cgcataatcggctttgatgagttcatgaacctcgttatcgacgacgctgcagaggtctac
gtcaaagatgctaagccaagacgggagcttggccgaatccttctcaagggcgacaatatt
actctcattcagcaagcacagtga

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