KEGG   Coprinopsis cinerea (gray shag): CC1G_13815
Entry
CC1G_13815        CDS       T01275                                 
Name
(RefSeq) endonuclease IV
  KO
K10771  AP endonuclease 1 [EC:3.1.11.2]
Organism
cci  Coprinopsis cinerea (gray shag)
Pathway
cci03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:cci00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    CC1G_13815
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cci03400]
    CC1G_13815
Enzymes [BR:cci01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     CC1G_13815
DNA repair and recombination proteins [BR:cci03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     CC1G_13815
SSDB
Motif
Pfam: AP_endonuc_2 DUF2124
Other DBs
NCBI-GeneID: 6004654
NCBI-ProteinID: XP_002911780
UniProt: D6RKI9
LinkDB
Position
2
AA seq 320 aa
MTASVTRSRTRGGASGATGAGSASFSSTANAVKEAEVVARPRKRVKLDKEDTVKSLASED
PDYTDTQALLDPTVESSASTTASPTKKRKPRKTASKTNADEPVDTSSFLPRVKSPWKVGA
HVSAAGGVENAVVNAAAIGCNAFALFLKSQRKWTSAALTEESISTFKKRMKEFGYAPGDV
LPHGSYLVNLGNPDAEKRQKSYECFLDDVKRCEALGLTLYNFHYEGGYDRIGVHGNIIGA
TFEQLKEIIDQVEDKTRVGVCIDTCHAFSAGYDIRTKEGWNETMDKFERVIGLEYLKGMH
LNDSKTAFDSKKDRHENIGL
NT seq 963 nt   +upstreamnt  +downstreamnt
atgactgcgagtgttacgaggagtcgcactcggggtggtgccagtggtgccaccggtgct
gggtcggcgtcgttctcttcgacggcgaatgcggtgaaggaggctgaggttgtggctaga
cctaggaagagagtgaaattggataaggaggatacggtgaagagtttggcttcagaggac
ccagactatacggacacccaggctctcctcgaccctacagtcgaatcttcagcttcaaca
acagcttctcctacgaagaagagaaaaccgcgtaaaaccgcgtcgaaaacaaacgctgat
gaaccggtcgatacctcgtcgtttcttccgcgcgtgaagagtccttggaaagttggtgca
cacgtttcggctgctggaggggtggagaacgctgttgtgaacgctgctgctattgggtgt
aatgccttcgcgttgttcctcaagtcccagcgcaaatggacgtctgcggccttgactgaa
gagtcgatctcgacgttcaagaagaggatgaaggagtttgggtacgcccctggagacgta
cttccgcatggaagttatttggtgaatttgggcaatccggacgcggagaaacgacagaaa
tcgtatgagtgctttttggatgatgtgaagaggtgtgaggcgttggggttgacgctgtat
aatttccactacgaagggggttacgatcgtattggagtgcatgggaatatcattggtgcc
acgttcgagcaactgaaggagattattgatcaggtggaggataagacgagggttggggtt
tgtattgatacgtgccacgcattctcggcgggctacgatattcgcacgaaggagggatgg
aacgagacgatggacaagttcgaacgcgttatcgggctggaatacctcaaaggcatgcat
ttgaacgatagcaagacggcgtttgattcgaagaaggatcggcatgagaatattgggctg
tga

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