Coprinopsis cinerea (gray shag): CC1G_13815
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Entry
CC1G_13815 CDS
T01275
Name
(RefSeq) endonuclease IV
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
cci
Coprinopsis cinerea (gray shag)
Pathway
cci03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cci00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CC1G_13815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cci03400
]
CC1G_13815
Enzymes [BR:
cci01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
CC1G_13815
DNA repair and recombination proteins [BR:
cci03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
CC1G_13815
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AP_endonuc_2
DUF2124
Motif
Other DBs
NCBI-GeneID:
6004654
NCBI-ProteinID:
XP_002911780
UniProt:
D6RKI9
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All DBs
Position
2
AA seq
320 aa
AA seq
DB search
MTASVTRSRTRGGASGATGAGSASFSSTANAVKEAEVVARPRKRVKLDKEDTVKSLASED
PDYTDTQALLDPTVESSASTTASPTKKRKPRKTASKTNADEPVDTSSFLPRVKSPWKVGA
HVSAAGGVENAVVNAAAIGCNAFALFLKSQRKWTSAALTEESISTFKKRMKEFGYAPGDV
LPHGSYLVNLGNPDAEKRQKSYECFLDDVKRCEALGLTLYNFHYEGGYDRIGVHGNIIGA
TFEQLKEIIDQVEDKTRVGVCIDTCHAFSAGYDIRTKEGWNETMDKFERVIGLEYLKGMH
LNDSKTAFDSKKDRHENIGL
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgactgcgagtgttacgaggagtcgcactcggggtggtgccagtggtgccaccggtgct
gggtcggcgtcgttctcttcgacggcgaatgcggtgaaggaggctgaggttgtggctaga
cctaggaagagagtgaaattggataaggaggatacggtgaagagtttggcttcagaggac
ccagactatacggacacccaggctctcctcgaccctacagtcgaatcttcagcttcaaca
acagcttctcctacgaagaagagaaaaccgcgtaaaaccgcgtcgaaaacaaacgctgat
gaaccggtcgatacctcgtcgtttcttccgcgcgtgaagagtccttggaaagttggtgca
cacgtttcggctgctggaggggtggagaacgctgttgtgaacgctgctgctattgggtgt
aatgccttcgcgttgttcctcaagtcccagcgcaaatggacgtctgcggccttgactgaa
gagtcgatctcgacgttcaagaagaggatgaaggagtttgggtacgcccctggagacgta
cttccgcatggaagttatttggtgaatttgggcaatccggacgcggagaaacgacagaaa
tcgtatgagtgctttttggatgatgtgaagaggtgtgaggcgttggggttgacgctgtat
aatttccactacgaagggggttacgatcgtattggagtgcatgggaatatcattggtgcc
acgttcgagcaactgaaggagattattgatcaggtggaggataagacgagggttggggtt
tgtattgatacgtgccacgcattctcggcgggctacgatattcgcacgaaggagggatgg
aacgagacgatggacaagttcgaacgcgttatcgggctggaatacctcaaaggcatgcat
ttgaacgatagcaagacggcgtttgattcgaagaaggatcggcatgagaatattgggctg
tga
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