Coprinopsis cinerea (gray shag): CC1G_14404
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Entry
CC1G_14404 CDS
T01275
Name
(RefSeq) transducin family protein/WD-40 repeat family protein
KO
K14791
periodic tryptophan protein 1
Organism
cci
Coprinopsis cinerea (gray shag)
Brite
KEGG Orthology (KO) [BR:
cci00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cci03009
]
CC1G_14404
Ribosome biogenesis [BR:
cci03009
]
Eukaryotic type
90S particles
Other 90S particles
CC1G_14404
Pre-60S particles
Other pre-60S particles
CC1G_14404
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_WDR5
WD40
WD40_Prp19
Beta-prop_WDR3_1st
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_WDR3_2nd
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_TEP1_C
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
EIF3I
Beta-prop_WDR36-Utp21_1st
NBCH_WD40
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Motif
Other DBs
NCBI-GeneID:
9379866
NCBI-ProteinID:
XP_002911407
UniProt:
D6RMA0
LinkDB
All DBs
Position
4
AA seq
574 aa
AA seq
DB search
MSNLISAVSWVRRGVAQQHPIKYVLDDGELERVSKLARIELEDARKELEKAHKAAMEMGK
GDEEDDDEEESEVVGMDADGKDDEGEWVDEDSDAMDVDSGPNDASKKPSKPKNPDDLTEY
NLDNYDEEEGGEIGGVFSSIKGLTYYKDNNEDPYITLKEDPEDDEREELEVLPTDNLIVT
AKTEDEISQLEIYVYDESQENLYVHHDLMLPNFPLCLEWLDYHPASSSTNSHPTPATEFG
NYIAVGTLDPEIEIWSLDIVEAMYPATVLGRPDKTKAHVPVPLGTGKKKKKKMKERQKDD
KCHVDAVLGLSWNKQIRNMLASASADRTVKLWDLSRDPVAGGEGAGAIRSFDVHKDKVQA
VQWNTTEPSVLLTGSYDRTVRTFDSRSPDTGVGAAVGSDVEALRWDPWDSYGFYVSLENG
MVLNYDARTLPSNLETPSAARFTLAAHDGAASSLDVNPHLKGCIVTGGTDKLVKVWNVTE
DDSNGKRQVSLVTSRDLGVGKVFSTVWSPDDPLTLAAAGSKAKLQLWDVGSNYGARKAFS
AKLKDAGKVLKEKAESGGVVGVVSDGEESDNDDD
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacctcatctcagcggtctcatgggttcgccgcggtgttgcccagcaacatcca
ataaaatacgtcttggacgacggagagttagagcgagtgagtaagctcgctcggatagaa
ctcgaagatgcgcggaaagagctcgaaaaggctcataaagctgctatggaaatgggcaaa
ggggacgaagaagacgacgatgaggaggaaagcgaggttgtaggcatggatgcggatgga
aaggacgatgaaggggagtgggtcgatgaagatagcgatgcaatggacgtggattctggg
cccaatgatgcttccaagaaaccctccaaacccaaaaatccagacgatcttaccgaatat
aacttggacaattacgatgaagaagagggcggagagattggcggtgttttcagcagtatc
aagggcctgacatactacaaggacaataacgaagacccttacatcacgttgaaagaggat
cccgaggacgacgaacgagaagagctcgaggtgctccccacggataacctgattgtgacc
gccaaaacagaagacgagatttcacaactggagatctatgtctatgacgaatcccaggaa
aatctttacgtccatcacgaccttatgctccccaactttcctctctgcctcgaatggctc
gactaccaccctgcctcgtcttctacaaattctcatccaactcctgcgactgaattcgga
aactacatcgcggtcggaaccctcgatcctgaaatcgaaatctggtccttggatattgtc
gaagcgatgtaccccgcaactgtccttggtcgacccgataaaaccaaggcgcatgtgccc
gtaccactaggaaccggcaagaagaagaaaaagaagatgaaggaacgacagaaggacgac
aaatgccatgtcgatgctgttcttgggctcagctggaacaagcagatccggaacatgctt
gcgagcgctagtgctgatcggacagtgaagctgtgggatctgagtcgggacccggtggcg
ggtggtgaaggagctggtgccatccgaagtttcgacgtgcacaaggacaaggttcaggcc
gtccaatggaatacgacggaaccaagtgtcctcttgaccggaagttacgatcgaactgtc
agaacattcgactcgagatctccagacacgggcgttggggctgcagtgggcagcgatgtt
gaagctctgcgatgggatccctgggatagttacggcttctatgtctccttggagaatggc
atggtattgaattacgatgcccgtaccctgccatctaatctcgagacaccaagcgctgca
agattcacccttgctgcacacgatggagctgcctcctccctcgacgttaaccctcatctc
aagggatgcatcgttaccggcggaacggacaagttggtcaaggtctggaatgtcacggag
gacgatagcaacggtaaacgacaagtgagcttggtcacatctcgagacctcggcgttggc
aaggtgttctctaccgtgtggtcaccggacgatcctctcacccttgccgctgctggttca
aaagccaaattgcaattgtgggatgttgggtcgaattacggcgcccgcaaagctttcagc
gccaaattgaaggatgcaggcaaggtactgaaggaaaaggctgagagcggcggtgtcgtt
ggtgttgtcagtgacggtgaagagagcgacaatgacgacgattga
DBGET
integrated database retrieval system
