Coprinopsis cinerea (gray shag): CC1G_14627
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Entry
CC1G_14627 CDS
T01275
Name
(RefSeq) hypothetical protein
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
cci
Coprinopsis cinerea (gray shag)
Pathway
cci03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cci00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CC1G_14627
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cci03021
]
CC1G_14627
Transcription machinery [BR:
cci03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
CC1G_14627
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
9380097
NCBI-ProteinID:
XP_002911196
UniProt:
D6RMV5
LinkDB
All DBs
Position
5
AA seq
631 aa
AA seq
DB search
MPPKNHSLSLLFHPKKNQNQKGPAQSQPKPRPKPPGAVEKKEEEDEDHLKLPDTPYSEYK
LLSSSLKGWKYDVMKFDSRKPVDILRWTAPVKLNRKDLRREDRTAAAAKVPEAVRPMLGL
DGKPVIGVDGKPVMVDAEGKPIHESGGTSSKDKGKANKRRFQKKTRQVFLVPDEVRQMQR
EERYPWVMEDSHPTHKEHWIGQLEDLSKAETHAFFMPAANDSFKFVPAHRWYKFQKKLNH
DFPTATADVESAYTKAQKKDPQAWLATFHGGKGASASTMAIFKGEAEDQKPSGPVGPGGR
KLKAVDRPPTSLLEDDEDPAVRRKRERELGEEGDLDEQLFEEDFADDEEMAAPDIDEEEA
KELEERMKREYKLANKQRDAGVDEDEEDDEEEDLAKVKAKRRMEKMIRNREGNDAYESDD
DENPYLSSAEEEEEEELPVPTGPAIQPQPQQVDQPNTPRPSTNKPAAPGSNSRTTSPATS
PSLGGHSLVAKRATSPKVPKARVPGSQPGSRATSPNPGSRATSPLANGAQKRKAEDPGTP
ASQNGGPSAGGQPKLKKKKVAATASNAELEGLIIDWLRNTENPTTRGCIQHFNSYLVDAA
KKKEFSEMVKRVAALKDGRLTLKPEFRSRNP
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgccgcccaagaaccactccctttctcttctcttccaccccaagaagaaccagaaccag
aaaggtccagcccagtcgcaacccaaaccacggccgaaacctcctggcgcagtggagaaa
aaagaagaagaggacgaggaccatttgaagctccctgatacgccctattcagaatacaag
ctactctcgtcttcgctcaagggctggaagtacgatgtgatgaaattcgattctagaaaa
ccggtcgacatcctcagatggacggcgccggtgaagcttaacaggaaggatttgcggcgg
gaggataggacggcggcggcggccaaagtgccagaggcggtgaggcctatgcttggactg
gacgggaaacctgtcattggagtcgatgggaagccggtgatggtggatgctgaagggaaa
cctatccatgaaagtggcgggacgtccagcaaggacaaggggaaggcgaacaagaggcgc
ttccagaagaagacccgacaagtcttcctcgttccagacgaggtccgccagatgcagagg
gaagagcgatacccgtgggtcatggaggattcccacccgacccacaaggaacactggata
ggccaattggaggatctttcaaaggcagaaacacacgcattcttcatgcctgctgccaac
gactccttcaaatttgtgcccgctcatcgctggtataaattccagaagaagctcaatcac
gatttccccactgctacagccgatgtggaatctgcgtacacgaaagcgcagaaaaaggac
ccccaggcatggttggcaacgttccacgggggcaaaggagcatcagcttccaccatggcc
attttcaaaggggaggccgaggaccaaaagcccagtggacccgtcgggcctggaggacgg
aaactcaaggcagttgatcgaccgcccactagcctgctcgaagacgacgaagatcctgcg
gtgaggaggaagagagagcgcgaacttggcgaggagggtgacctcgatgagcaactcttc
gaggaagattttgctgatgacgaggaaatggctgctcctgatattgacgaagaggaggca
aaggaactggaggaacgaatgaagcgagagtataaattggccaacaaacaacgtgatgcc
ggcgtcgacgaggacgaagaggatgatgaagaagaagatctggccaaggtaaaggcaaag
aggcgaatggaaaagatgattcgtaacagggagggcaacgatgcttatgagtcggatgat
gatgagaatccgtatttgagttctgcggaggaggaggaggaggaagagctacctgtgccc
actggccctgccattcagccccaaccacagcaggtcgaccaacccaataccccaaggccc
tcgaccaacaagccagcagcgcctggctccaactcgagaactacgtcacctgctacttca
ccaagcctgggtggtcattccctggttgcaaagcgcgcgacgagccccaaggtgccgaag
gcaagagttccgggtagtcaaccgggtagtcgcgccaccagtcctaatcctggtagtagg
gcaactagccctcttgccaatggagctcagaaacgaaaggcggaagacccaggaacgcca
gcttcacagaatggtggaccatctgcaggcggacagcccaaactgaagaagaaaaaggtt
gctgcgacggcgtccaacgccgagttggagggccttatcattgactggctcagaaatacg
gagaatccgacgacacggggttgcattcaacacttcaactcgtatctagtcgacgcggcg
aagaagaaagagttttcggaaatggtcaagcgggtggcggccctcaaagatggacgtttg
accttgaagccagagtttaggtcacgaaatccttga
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