Coprinopsis cinerea (gray shag): CC1G_14689
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Entry
CC1G_14689 CDS
T01275
Name
(RefSeq) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
cci
Coprinopsis cinerea (gray shag)
Pathway
cci03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cci00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CC1G_14689
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cci03021
]
CC1G_14689
Transcription machinery [BR:
cci03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
CC1G_14689
Prokaryotic type
Archaeal type
TFB
CC1G_14689
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Guanylin
Cyclin_N
RB_B
Motif
Other DBs
NCBI-GeneID:
9378258
NCBI-ProteinID:
XP_002911260
UniProt:
D6RMK3
LinkDB
All DBs
Position
5
AA seq
346 aa
AA seq
DB search
MAYSQPFPSTAPTKSADPHYGPDLAVRLICPECKDPNPNIVEEFGSGDLVCGNCGLVLGD
RVIDTRSEWRTFANDEGDDPSRVGAASDPLLEGIEQLDTVISFRDGGSGIARELQRAASR
SQNNRSERNLLTAFRDISNWCDQFSLPKTISDIAKQLYKRADEEKLLRGKPVEAVIAACI
FIACRKAHVPRTFREICNLTRVSKKMLGQCYKALEQSLNLSGPESMPLANTPTTGPEKLL
VRYCNHLDLPANVQAICSEIIVNARNHGIADGRSPISIAGGAIYFTCLLLGKPKPIREIS
AVAGVSEGTIKLVYRLYYNDREKLVKKEWIESGKADLSRLTIEPVK
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atggcatactcacagccattcccgtcgactgcaccaactaaatcagcagatcctcactat
ggaccagacctcgcagttcgccttatctgtccagaatgcaaggacccaaacccgaacatt
gttgaagagtttggaagtggcgacctcgtttgtggcaactgtggcctagtactcggagac
agagtcattgatactcgcagtgaatggcgtacgttcgccaatgacgagggagacgatcct
tctcgtgtcggtgcagcgtctgaccctctgctggagggtattgagcagctcgataccgtg
attagcttcagagacggaggcagcggcatcgcacgcgaactgcaacgcgcagcttcgcgt
tcgcagaacaaccgctcagagcgcaacctcctcaccgccttccgcgacatcagcaactgg
tgcgaccagttctcactcccaaaaacaatcagcgatatcgccaaacagctctacaaacgc
gcggacgaggagaagctgttacgcgggaaacctgtagaagctgtgatcgctgcgtgcatt
tttatagcttgcaggaaggcccatgtaccgcgtacgtttagggagatttgcaacttgaca
agagtgtcgaagaagatgttggggcagtgttacaaggcgctggagcagtcgctcaatctt
tccgggccagagtcgatgcccctcgcgaatacacctacgactggacctgagaagctcctc
gtgcggtactgcaaccatctcgatttgcccgccaacgtccaggcgatctgctccgaaatc
attgtgaatgcacgaaaccatggcatcgcggatggtcgtagtccaatatccatcgcaggc
ggggccatctactttacctgtttactcctcggaaagcccaagccgatacgcgaaatcagc
gctgtggccggagtcagcgagggaaccattaagttggtttataggttgtattataatgac
agagaaaagttggtcaagaaggagtggatagagagtgggaaggcggatctgtctcgtttg
acgatcgaaccggtcaagtag
DBGET
integrated database retrieval system
