Coprinopsis cinerea (gray shag): CC1G_15041 Help Entry CC1G_15041        CDS       T01275                                  Name (RefSeq) cytoplasmic protein   KO K20826   RNA polymerase II-associated protein 1 Organism cci  Coprinopsis cinerea (gray shag) Brite KEGG Orthology (KO) [BR:cci00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:cci03021]     CC1G_15041 Transcription machinery [BR:cci03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Others      CC1G_15041 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  RPAP1_C RPAP1_N Motif Other DBs NCBI-GeneID:  9379963 NCBI-ProteinID:  XP_002910710 UniProt:  D6RP29 LinkDB All DBs Position 8 AA seq 1329 aa AA seqDB search MASNKPIVGSIVERKPSSKPTGQKPGFGGGPSGFPSVQHRSKSAFARNREEAQRRNAAGG VNGRPTGPPTVTASTSSSTASSTAGPTPSTKPQPSPSGFSLANDHAPPKDDIAIMREHIS QENEKIIAGMSPEEIEEERRQIIARFGTGIGGVLEKAKKNRMKREQETKFVGSSHRRGAL PPLPPETPEELRELSEVPITPEGPKPTERARSPPPPALSAASSRPSSRADRRLRFAELEP KDVYVYESSPPTPKKPVLALPPPSDKRDPTVVSLGKWHGNMAYPPQPMAVPDSSEPKKEH APNNTEEKEPEEGTPEYIRRRYFPQVPASDPSIEWMMAKSDDSTNDSSIRFDLQGAPIPP DLRSKLPTHLGLHHHAEGSHAGYTLDDIFLLSRSTVPAQRAAMFTVISGICERLCKMAHG QSVPGLEELKGKEEELRKRIAAAGVEAMNEKGSVGLQAIEVVWRSVADWDKELVAVGLDG VQLEASADETIQSLPLDFILPSISTAFNLYGEAYPPATLKQLLQVVQRLALQNTNTATKI VETDKLVLGIGRCFLLSPTLSDRGSVPDPSAINLLTSLVRTSRQAAETISKALADDLLRF IVSLPTSSMLKPSLATALVASTLDFYAALGMYGLYTCVASTAMEQFNNLSRYILSLEPES SPLLGPWLNLTQVWTICAIEPHNTSPPHDILWSRVSAWGWQMDIMQMMDKLELETVDRWK VWGDLLGTLAAWMEGAKVNGVRGGETERSELLAVVKPAFVSGSGEQWTLVNKCIDYLQSA LSQPSPSIADSRTSAGVARVLSNAIRLWLSCLPPRLEGPPEAPPFDLPFARISTLVASLL TNPMWTAATSALDDRERRYAIVYLRDFASLSGWYLRLSRRLPDTSQGLWLAQAFSIVLRC LPGDEEFTLNTIDSILSLIPEINPAILEPFMEDAVLPREKVETGDEDDQAVEVVESRPRL SPITPTPTSITTSTVLVMPSPFIKHHSNKKLSGLPLQTDWMLGPLNDLIHSGESPVFRHL PRGWDFSELDVTRATLALALKARQILSEWKLFSFVLKRGEAILGCMKVFMLEHGLVQDTQ KTSEGEVFRDKIVEELMVKLIDPYRVGAPSNLAQLDSGKVEDLEKLASSILGPSTPFYQF YTDFIGLYDAISFSHPMFGLLLLPPISMRYAVDYRRLFWNDYSHTLRTITVYPNQVVAAD LREYLYPVENDAQVIGGYLSAVLKRSAKEFLRWVALHHVASNIWVDLRDEKEDGPFNQDR AVKLLQAIVAQGDVDTIAGVVKYKQPPRHEKAKLPQDCGQPEADVLSSRKVWVQKSLGDG YTKKIEGLL NT seq 3990 nt NT seq  +upstreamnt  +downstreamnt atggcctccaacaaaccaatagtcggttccattgtcgaacgaaaaccgagctcgaaacct acagggcaaaaaccagggtttggaggaggacctagtgggtttcctagtgttcaacatcga tcgaagagtgcattcgctcgtaaccgagaagaggctcagagaaggaacgctgcaggtggt gtgaatgggcggcccactggcccaccgaccgttacagcttcgacatcgagttcaacagca tcttcaacagcaggtcccaccccgagtacgaaaccacagccgtcaccctccggtttctct cttgcaaacgaccacgcaccaccaaaggacgatatcgcgattatgagagagcatatcagt caggagaacgagaagattattgctgggatgagtcctgaggagatcgaggaggagcgaagg cagatcatagcacggtttgggactgggattggtggggtattggagaaggccaagaagaat agaatgaagcgggagcaggagaccaagtttgttgggtcgtcgcatcgtcgaggagccctg cccccgctaccgcctgaaacaccagaggagctacgggagttgtctgaagtacccatcact ccagaaggacccaaaccaacagagagagcccggtcgcccccacctccagcgttatcggca gccagtagccggccctccagtcgagcagatagacgccttcgttttgcggaactggagccc aaggatgtgtatgtctacgaatcaagccctcctacacccaagaaacccgtgcttgccctg cctcccccgtcagacaagcgcgacccaaccgtggtttcactaggaaaatggcatggaaat atggcatatccaccgcaaccaatggccgtccctgattcatctgaaccgaagaaagagcat gcacccaacaatactgaggaaaaggaaccagaagagggcaccccagagtacatccgacgt cgctacttccctcaagtccctgcctccgatcccagtatcgaatggatgatggctaagtct gacgattcaaccaacgactcatccatccgcttcgacctccaaggtgcacccatcccaccc gacctgagatccaaattacccacccaccttggcctccaccatcacgccgaaggatcgcac gcaggttacactctcgacgacatcttcctgctttccaggtcgactgtgcctgcgcagagg gctgccatgtttaccgttatttcagggatctgcgagaggctctgtaagatggcgcacggg caatcggtaccgggcctggaggaactgaaagggaaggaagaggaattgaggaagaggata gcagctgctggcgtagaagctatgaatgagaagggaagcgtgggtttgcaagcgattgag gtcgtttggcgctcggtcgccgattgggacaaggaattagttgctgtcgggttggatggg gtccagttggaggcgtctgcagacgaaacaatccaatccctccctctggatttcattctg ccttccatctccacggccttcaacctgtatggcgaagcgtatccacctgcaacactcaag cagcttcttcaggttgttcaacggctagcactgcaaaacaccaacacagcaaccaaaatt gtggaaactgacaaactggtcctgggcataggtcgttgcttccttctttcgccgaccctt tcagatcgtggatcggttccggacccgtcagccataaacctcctgacgtccttggttcgc acatcccgccaagcagcagaaaccatttccaaagcgttggccgacgacctccttcgattc atcgtttctctgccgacctcgtcaatgttgaagccctcactagcaaccgctctggtcgct tcgactctcgacttctatgccgcactggggatgtatgggttgtacacctgtgttgccagt acagccatggaacagttcaataacctcagtcggtacatcctgtcccttgaacccgaatcc agtcctcttctcgggccatggttgaacctgacgcaagtctggactatatgcgctatcgaa cctcacaacacctctccacctcacgacatcctctggagccgcgtctctgcgtggggatgg caaatggatattatgcagatgatggataagctcgagctcgagacggttgaccggtggaag gtgtggggtgatttgttggggactttagccgcgtggatggaaggggcgaaagttaacggt gttcgaggcggagaaacggaacgaagcgagctgctggcagtggttaagcccgcctttgtt agcggttctggggagcaatggacactcgttaacaagtgtattgactaccttcaatccgcc ctgtcgcaaccaagcccttcaattgcggactctcggaccagcgctggcgtcgcacgcgtt ctctcgaatgcgatacgactttggctttcttgccttccacctcgcctagaaggtcctccc gaagcgcctcccttcgatcttccctttgcacgcatctcaacattggtcgcatctctcttg accaatcccatgtggacagcggccacctccgccttggacgatcgggagcgtcggtatgca attgtttacctacgggactttgcatcgctttcgggctggtaccttcgcctgtcacgaaga ttgccggatacatcacaaggactgtggctcgcccaagccttctcgatcgtgctgcgatgc cttcccggcgatgaagaattcacattgaatacgatcgacagcatcctctccctcattccc gaaatcaatccggctatcttggagcccttcatggaagacgccgtattgccacgagagaag gtcgaaacaggcgacgaagacgatcaggcggtcgaagtcgtcgaatctagaccccggttg agccctattaccccgacacccacatcgataaccacatccacggttttggtgatgccttcg ccattcattaagcaccattcgaacaagaagctgtccggtctccccttgcaaactgattgg atgttgggtccgttgaatgacctgattcattcaggcgagtccccggtgttccgacacctg cctcgaggatgggacttttcggaattggatgtgacccgcgctaccttggcgctggcgctt aaagcgcgacagatcctctcggaatggaagcttttctcgtttgtcctcaagcgtggggaa gctattctcgggtgtatgaaggtctttatgctggagcatgggcttgttcaagatacgcag aagacttcagaaggagaggtgttcagagacaagatcgtcgaggagttgatggtaaagctt attgacccgtatcgcgtcggggcaccgagtaatttggcacagttggattctgggaaagtc gaagacctggagaaactcgcctcttcgatcctgggcccgtcaactccattttatcagttc tacaccgacttcatcgggctctatgacgccatatccttctcacatcctatgttcggcctg ctccttctaccaccaatctccatgcgctacgccgtcgactatcgaagactgttttggaac gactactcccatacgcttcggacgattactgtctacccaaaccaggtcgttgcggcggat ctgcgagagtatctttatccagtggagaacgacgcgcaggtgattggaggttacttgagc gcggtgctgaagaggagtgccaaggagttcttacgatgggtcgctcttcaccatgtggct tcaaacatttgggtggacctgcgcgacgaaaaggaagatgggccattcaaccaggaccgg gcggtgaagcttttgcaggcgatagtagcgcaaggcgatgtggataccattgccggtgtc gtcaagtacaaacagcctcctcgtcacgaaaaggcgaagttgccacaggattgcggccag ccagaggctgatgttttgtcatcgagaaaagtttgggtccagaagagcctgggagacggg tatacaaaaaagatagaaggattattgtaa

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