Coprinopsis cinerea (gray shag): CC1G_15787
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Entry
CC1G_15787 CDS
T01275
Name
(RefSeq) nuclear pore-associated protein
KO
K23719
nuclear mRNA export protein SAC3
Organism
cci
Coprinopsis cinerea (gray shag)
Brite
KEGG Orthology (KO) [BR:
cci00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cci03019
]
CC1G_15787
Messenger RNA biogenesis [BR:
cci03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX-2 complex
CC1G_15787
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAC3_GANP
Motif
Other DBs
NCBI-GeneID:
9380118
NCBI-ProteinID:
XP_002910067
UniProt:
D6RQZ0
LinkDB
All DBs
Position
13
AA seq
1534 aa
AA seq
DB search
MASLDTFTHSRGRGASPNHRGRPLSRNKQWVANPNPTSEVQGSSSESWERGGHHGGRGRG
RGRGRVSPRGRGRGTFPNATLRNTNIRKSTSKSPPKRNEQLAPASIDPATGFHGLPIIFE
PEFSTKEELENYYQELVVAREQERKRAIAEGKMDDPLVQKRLEDAITLVGTCPDMCPRFE
RYRRERESNLAEWETIPGTKRIDHQRAVKMYERGAGDKSLPSDVRPPHVLKKTLDYLFQD
LLPRGGLERTAYFIRDRSRAVRNDFSLQHLTGPEAIEAHDRCVRFHILVIHFQRNAKGFS
MQLEEQQLMNSLQSLKEFYEDQRGKYQSPTELEMRVYHRLIHMRDQVERPENIPDHIKQH
PVFKYVTQFRRHVQKKSEPITKKSPLIVDDKAMDIFRQLVEVLRGEGNTVMIYLVACILE
WLFGPETIDDIESIRGDLSLSDIIDGKSQTAEIQEVTSDVDFDSQMEDYTQDEEQEADVE
PAPLLFPNVPTSAPAPSQPQPSVFGSSFTVPPSNQPIAPPPIPSQQNAFASLVAQPNVFG
TTFGAPAPKSAFPAVPSVFGSLQSSTQSTSASTTSRSAPTPSVFGGSVFSTSKPAVVETA
LKASAPSNPTPPASVFSSTSPFAQPPPYGEPLPNVVFPSVASPAPISPQPPPLPQAPPVA
TATNEASSTTKPLPPSSPSTFLNPKATPFQPGLFNKQPRPKSPTTAPAEPQESVTSIAAT
APAVTRANLSSSSSRTATPPPLKIDVDLKTPAPPPTQPALSSPIHPPPPPKFQPISLPST
PTSGAPPSAVPLHLKGHLSTPFASGPSSNTGPLSPLFVQQSSPFALSTASSSTSSSPLCS
YPMPGAPVLARGTDIEAGWACLNEMGKGKEKEKEREPEPPQQQQQPQPKRPPERREPSSK
DLAAMEGQALSFARRSQVVKSAFQVWSRKNAEKAAYLRAIKQADEYQERIRLERSLNGSA
RGGAGTPDRKRRMSESVTSEGGDTSMLSVSQLERRGGQSPQRKRARKRISSVYQERRTDD
ELFKRFKENHEDHQKRWAPGTFLSLLKAYVKETVRLENMPSTWQIWVSVNPEVSDGTAIW
VERKFNIPESGEWLEDVAFTIPVTKTSSPSGEAHPGLVVFECTPIEGVDDEIERKYRVLD
DCTRLRGIVDKFPSDRYYTPALLTFCWTSNPDSYSAPDLFEMIDKLVKEGRIKSHVSIPM
NSNDKDADGQFKAALEKLDMDLEGELVKPLNMKGVLKHYLPTLNSFIDEWVGSCANGDHF
NWKLYNLVVHAIVELLNTLGQQISVLCGLQADDFALPEYDDGAIDDSDSAYEVAEEWLTN
ISSKKDVSHIFNDLASHRNIEQDFPTRIFMEHLVQLWTELVFQASGDHPSSLSSSLNSSV
AGHPATIYYVLAEDLETSFQEFEETFQPWRIKLSQRLNVTARREPKRSHSMGSNTSATAS
PELKRPRLSTPSINGDYSPFSSPMLNGNGNASLNSGSIGVEEPSPSPSLVSLPLSERTES
VSGQSHGQVQKPKYTAASLRALTEDMRRKFMRTR
NT seq
4605 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgctggacacattcactcattccaggggtcgaggggcgtcacccaaccaccgc
ggtaggcctctctcacgcaacaagcaatgggtcgccaatccgaatccgacgagcgaagtt
caaggcagctcaagcgaaagctgggaacggggaggacatcatggtggtcgaggacgtggt
cgaggacgagggagggtctcaccgcgaggacgaggacgaggaacgttccctaacgctact
ctgcgcaacaccaatatccgcaagtcaacgtccaagtcacctccaaaacggaacgaacaa
cttgctcccgcatccatcgacccagcgaccggattccatgggctacctatcatcttcgag
cccgaattctccaccaaagaagagctggaaaactactaccaagagctcgtcgtcgcccgt
gagcaagaacggaaacgggcaattgcagaaggcaaaatggacgacccgcttgtgcaaaag
cgtctcgaggatgccattactcttgttggaacctgtccagatatgtgtcccaggtttgag
cgatatcgtcgcgaaagagaaagcaatttggctgaatgggaaacgattcctggaaccaag
cgaatagatcaccaacgggcagtcaagatgtatgaacgcggcgcgggcgacaagtctctc
ccgtcggatgtgcgtcccccgcacgttctcaagaaaaccctcgactacctatttcaagat
cttctaccccgagggggacttgagcgaacagcctacttcattcgagatcggtcccgtgca
gttcgaaacgacttttcgttgcaacaccttacagggcccgaggccattgaggcccacgac
cgctgtgttcggtttcatatattggtcattcacttccaacgaaacgccaagggcttttca
atgcagctggaggaacaacagctgatgaactctcttcaaagtttgaaggagttctacgaa
gatcaaaggggaaagtaccagtcgccaacggagttagaaatgcgagtgtaccaccgcctc
attcacatgcgcgatcaggtagaacgtcctgagaacatccccgaccacataaaacaacat
cctgtcttcaaatacgtcacacagttccgacgacatgtgcagaagaagagtgaacctatc
acaaagaaaagccctctcattgttgacgacaaagctatggacatcttccggcaattggta
gaagttctgcgcggagaagggaacacagtgatgatctaccttgtcgcgtgcattctggaa
tggttgtttggcccagagacgatcgacgatattgaaagcattcgtggcgatttgtccctg
tccgacatcatcgacggcaaatcccaaaccgcagagatccaggaggtcacatcggatgtc
gactttgattcacaaatggaggactacacgcaggacgaagaacaagaagctgatgtggaa
ccagcgcctctgctcttccccaatgtcccgacctctgcacctgctccaagtcaaccacag
ccatctgtttttggctcttcctttactgtacccccttcaaaccagcccattgctcctcca
ccgattccgtcccaacagaatgcctttgcttctctagttgctcagccaaacgtttttggt
acaacctttggtgcaccggcgccgaaaagtgcattccctgccgttccatctgttttcggt
agtctgcagtcctcgacccaatccacctctgcttcgaccacctctcgatcggcaccaaca
ccttcggttttcggcggcagcgtgttctcgacgtcaaagccggcagtggtggaaacagca
ctaaaggcatccgcgcccagcaacccaacaccaccggcttcagtgttttcctcgacctca
ccctttgcacaacccccgccatatggtgagcctttgccgaacgtggtattcccgtctgtg
gcatcgcctgcacccatttccccgcaaccaccgcctttgccacaagcgccaccagtagcc
acggccacaaatgaagcgtcttcaacaacaaagcctttgcctccttcgtcaccatccacc
ttccttaacccaaaggcgacgcctttccaaccgggactatttaataagcaaccacgacca
aagtcccctaccaccgcccctgcagaaccacaggagagtgtcacatcgattgcagcaacg
gcgcctgccgttacccgtgccaacctctccagttcttcatctaggacagcgacgcctcca
ccactgaagatcgacgtggacttaaaaacacccgccccaccaccaacccaaccagcgctt
agttctcccatccatcccccacctccgccgaagtttcagccgatctcactaccctccacc
ccaacatccggtgcccctcccagcgcggttcccttgcacctcaaaggacatctctccacg
ccttttgcatcagggcccagttcgaatacgggtcctttgagcccattgttcgttcagcag
tcgtcgccctttgcgctctccaccgcttcgtcttccacttcgtcgtctccactctgttcg
tacccgatgccgggtgccccagttctggccagggggaccgatattgaggccgggtgggcg
tgtttgaacgagatggggaaaggtaaagagaaggagaaggagagggaacctgaaccgcct
cagcaacaacagcagccacaaccaaagcgaccacctgaacgacgtgaaccttcatccaaa
gaccttgcagcaatggaagggcaagctctctcgttcgcaaggcgcagtcaagtcgtgaag
tcagctttccaagtgtggtctcgcaagaacgccgaaaaagctgcatatctcagggcaatt
aaacaggccgacgagtaccaagagagaatacggttggagaggtcgttaaatgggagtgcg
cggggtggtgccggtacaccagatcggaagaggaggatgtcggagagtgtaacttcggag
ggtggtgatacctcgatgttgtcggtgtcgcagttggagagaaggggtgggcagagtccg
cagaggaagcgagcgaggaagagaatatcgagtgtgtatcaggagcggaggacggacgac
gaacttttcaagaggtttaaggagaaccatgaagatcaccaaaaacgctgggccccgggt
acattcctctccttgctcaaggcatatgtcaaggagacagtccgactggaaaatatgcct
tcaacgtggcagatatgggtatccgttaatcctgaagtgagcgacggaacggcgatttgg
gtggagaggaaattcaatatcccggaatcgggtgaatggttggaggatgttgcgtttacg
atacccgtcacgaaaacctcatctccgtcgggcgaagcgcatccgggacttgtggtgttt
gagtgtacacccatcgagggcgtcgatgatgagattgagaggaagtaccgggttttagat
gactgtacgaggttgagggggattgtggacaagtttccgagtgatcgatattacactcca
gcgttgttgacattctgttggacgagcaaccccgattcgtactctgcgccagaccttttc
gagatgatcgacaaacttgtcaaggagggccgaattaagagccatgtctccattccgatg
aactcgaatgacaaggatgcggacggtcagtttaaggcggcgttggaaaagctcgatatg
gatctcgagggagagcttgtgaagcctttgaacatgaagggtgtgctcaagcactacctg
cctaccctcaattcgtttatcgacgagtgggtagggtcgtgtgcgaacggcgatcacttc
aactggaagttatataacctcgtcgtccacgccatcgtcgaacttctgaacactcttggg
cagcaaatatctgtgctgtgtggtttgcaggctgacgactttgcccttcctgagtatgac
gatggtgcgattgatgatagcgattctgcgtacgaggtggccgaggaatggcttaccaat
atttcctccaaaaaagatgtgtcacatatcttcaatgacttggcttcacatcggaatatc
gagcaagacttcccaactcgaatcttcatggagcatcttgttcaactttggaccgaactc
gtattccaagcttcgggcgaccacccctcatccctatcctcatctctcaacagctctgtt
gctggccaccctgccacgatctactacgtattggctgaagacctcgaaacatcattccaa
gaattcgaagaaaccttccaaccatggcggattaagctcagtcagaggttgaatgtgact
gcgcggagagaaccgaagaggagtcattcgatgggtagtaatacgtctgctactgctagt
cccgaactcaaacgcccaagattatccactccttcgatcaatggcgattattcaccattc
tcaagtcccatgcttaatgggaacggcaatgccagtctgaactcgggatccattggagta
gaggaaccctctccttcaccgagtttggtttctttgccgctttctgagcggacggagtct
gtatctggtcaatcccatggacaggtgcagaaacctaagtatacagctgcgtccctcagg
gcacttacggaggatatgaggaggaagtttatgcggacccgttaa
DBGET
integrated database retrieval system