Cinclus cinclus (white-throated dipper): 134041178
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Entry
134041178 CDS
T10813
Symbol
MRE11
Name
(RefSeq) double-strand break repair protein MRE11 isoform X1
KO
K10865
double-strand break repair protein MRE11
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic03440
Homologous recombination
ccic03450
Non-homologous end-joining
ccic04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
134041178 (MRE11)
03450 Non-homologous end-joining
134041178 (MRE11)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
134041178 (MRE11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccic03032
]
134041178 (MRE11)
03400 DNA repair and recombination proteins [BR:
ccic03400
]
134041178 (MRE11)
DNA replication proteins [BR:
ccic03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
134041178 (MRE11)
DNA repair and recombination proteins [BR:
ccic03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
134041178 (MRE11)
BRCA1-C complex
134041178 (MRE11)
NHEJ (non-homologous end-joining)
MRX complex
134041178 (MRE11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mre11_DNA_bind
Metallophos
Chal_sti_synt_N
Motif
Other DBs
NCBI-GeneID:
134041178
NCBI-ProteinID:
XP_062343539
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Position
2:complement(39921376..39941217)
Genome browser
AA seq
704 aa
AA seq
DB search
MSTINSQDDENTFKILVATDIHLGYLEKDPVRGNDTFVTFNEILDHARKNEVDFILLGGD
LFHDNKPSRKTVHSCLESLRKYCMGDRPVQFEILSDQAVNFHYSKFPWVNYQDENLNISI
PVFSIHGNHDDPTGADALCALDILSCAGLLNHFGRSTSVEKIDISPILLRKGRTKIALYG
LGAIPDERLYRMFVNKQVTMLRPKEDEDSWFNLFVIHQNRSKHGATNYIPEQFLDDFIDL
VVWGHEHECKIAPFQNEQQRFYISQPGSSVVTSLSPGEAVKKHIGLLHVKGKKMKMEKIA
LETVRTFHMEDIVLADHPDLFNPDNPNVTQAIQAFCMEKVELMLDTAERECLGNPRQPEK
PIIRLRVDYAGGFEPFSVHRFSQKYMHRVANPKDIIHFFRRREQKEKKDIDLNFGKLVSR
PAEGTTLRVEDLVKQYFQTAEKKVQLSLLTERGMGEAVQEFVDKEEKDAIEELVKFQLEK
TQRFLKERRTDAVEEKIDEEVRKFRESRKKNTEEEDKEVREAMMRARAHRSEDEVLVSAS
SDEDSMDMEVIGISNPSDGLSSTLSRGRGRARGRARGTRGQNSTARGSSRRGRGATSQES
ASGSRSYKSVSVPGKTPSILDAFRSSKTDRSSNSFQSYSEDIIDVDSDLEDTSFVPPSSK
VNQRFPTLSSLSKRGSQSQTSKGVDFESDEDDPFMSPATSRRTK
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccatcaactcacaggatgatgaaaatacctttaaaatactcgttgctactgat
attcatcttggctatttggagaaggatccagtgcgtggaaacgatacgtttgtaactttt
aatgaaatactggaccatgctcggaaaaatgaagtggactttattttattaggtggggac
cttttccatgacaacaagccctccagaaaaacagtacactcttgtttggagtcactaaga
aaatactgcatgggtgatcgtcctgttcagtttgaaattttgagtgatcaggcagttaat
tttcattacagcaagtttccttgggtgaattatcaggatgaaaatctcaacatttctatt
ccagtttttagtattcatggcaatcatgatgatcccacaggggcagatgcactgtgtgca
ttggatattttaagctgtgcaggactgctgaatcattttggacgttcaacttccgtggag
aaaatagatattagtcccattttattgcgtaaaggtagaacaaaaattgctctatatggc
ttgggagctattccagatgagaggttgtatcgtatgtttgtcaataagcaagtaaccatg
ctgagaccaaaggaagatgaagacagttggtttaacttgtttgtgattcatcagaatagg
agcaaacatggagctaccaactacattccagagcagtttttagatgattttattgatctt
gttgtgtggggacatgaacatgagtgcaaaatagctccattccaaaatgaacagcaacgt
ttctacatttctcagccaggaagttcagtggtgacatctctgtcccctggagaagctgtg
aagaaacacattggtttgctgcatgttaaagggaaaaaaatgaaaatggagaagattgct
ctggagacagtgcgaactttccatatggaggatattgttctagctgatcatccagatctt
tttaatcctgacaatcctaatgttactcaggcaatacaggcattctgcatggaaaaggtg
gaattgatgctggacactgcagaaagagaatgcttgggaaatccccgccagccagagaag
cctatcataagattaagagttgattatgcaggtggctttgaaccattcagtgtccatcgt
ttcagccagaagtacatgcatagggtggctaacccaaaagacatcatacactttttcagg
cgtcgtgaacaaaaagagaaaaaagacattgaccttaattttggaaaattggttagcaga
cctgctgaaggaacgacactcagggtggaagaccttgtaaagcagtatttccagacagca
gagaagaaagtacagctttcacttctaactgaaagaggaatgggagaagcagtgcaagag
tttgtagacaaagaggaaaaagatgccatagaagagctggtgaaatttcaactagaaaaa
acgcagaggtttctcaaggagcgtcgcactgatgcagtggaagaaaaaatagatgaggag
gtgcgaaaattcagggagagtagaaaaaagaatactgaagaagaggataaggaagtccgt
gaggcaatgatgagggccagagcccaccgatctgaggatgaagttctggtctcagcctcc
agtgatgaagattccatggatatggaggtgataggcattagtaatccaagtgatggcctt
tcttcaacactgagccgaggaaggggtcgggcaagaggcagggcaagaggcacaagagga
caaaattcaacagcaagaggttcgtctcgaagaggaagaggagccactagccaagagtca
gcttctggcagcagatcctacaaatctgtatctgtgcctggcaagacaccatctatcctg
gatgcctttaggtcttcaaaaacagaccgctcttcaaattcattccagtcttattctgag
gatattatagatgttgattctgatctagaagatacttctttcgtccctccttcttccaaa
gtaaatcaaaggtttccaactctatcttcacttagtaaaagaggttcacaaagccaaaca
tctaaaggagttgattttgagtcagatgaggacgatccattcatgagccctgcaacgtca
agaagaactaagtga
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