Cinclus cinclus (white-throated dipper): 134041190
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Entry
134041190 CDS
T10813
Symbol
DDX10
Name
(RefSeq) probable ATP-dependent RNA helicase DDX10
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
ccic Cinclus cinclus (white-throated dipper)
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccic03009
]
134041190 (DDX10)
Enzymes [BR:
ccic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
134041190 (DDX10)
Ribosome biogenesis [BR:
ccic03009
]
Eukaryotic type
90S particles
Helicases
134041190 (DDX10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
PAS_11
Motif
Other DBs
NCBI-GeneID:
134041190
NCBI-ProteinID:
XP_062343565
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All DBs
Position
2:45146632..45303291
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AA seq
873 aa
AA seq
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MGRHGGAGAAAASSMDPVRSFERWKKKYTRRTKRLRLQRKERKRPEWQVERDNIGRLVQR
YPEINASEIQRFSDFPLSKKTLKGLQEAQYRVVTEIQRQTIGLALQGKDVLGAAKTGSGK
TLAFIVPALELLYRQQWTSADGLGVLIISPTRELAYQTFKVLRKVGKNHEFSAGLIIGGK
DLKEESERIHHINMLICTPGRLLQHMDETSYFYASDLQMLILDEADRILDMGFADTMNAI
IENLPKKRQTLLFSATQTKSVKDLARLSLKDPEYVWVHEKAKFSTPATLDQNYVVCELQQ
KVNMLYSFLRTHLKKKSIVFFASCKEVQYLFRVFCKLQPGLPVLALHGKQQQMKRMEVYT
CFIRKKAAVLFATDIAARGLDFPAVNWVIQFDCPEDANTYIHRVGRTARYKEGGEALLVL
LPSEEKGMVEQLAQRKVPISEIKINPEKLTDIQKRMQAFLAQDQELKEKAQRCFVSYLRS
VYLMKNKEVFDVFKLPLAEYALSLGLAMAPRVRFLQRVRKQLCANEAANGTDHLEETEQN
ENTLTLVNEAVEKCGTDFSGKTSVNQTKEKQRRKEIEECSASSGIAEESGESEDELKELS
EEEEKEVHVPNRVPNSDSMQFFEDDDDEDDTEGLDLLTVKQRDVFGVEAKDNPAPTTSKS
KMKKKTTKTQEAKKILKKKFKVNTKIVFTEEGELVQQWPPVQKSNLAQADEEDDASGINL
DKAKEILREEDKFDKEEYRKKVKEKHREKRLKEKAARREARNKNAQAEEETVAFLAHSGS
EDEFDPSTLPDPDKYKDCDVEQDSESEDNYSELEEKTGRKKRSYSNSATAEEMPLKRKKM
QFSQEEDPCLPLDTGLSLAEDEELVLHLLNSHN
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atgggccggcacggcggcgctggggccgcggcggcctcctccatggaccccgtgcgcagc
ttcgagcggtggaagaagaaatacacccggcggacgaagaggctgcggctgcagcgcaag
gagaggaagcggcccgagtggcaggtggagcgggataacatcggccgcctggtgcagcgc
taccccgagataaatgcaagtgaaatccaaagattttcagattttccattgtcaaagaaa
acccttaaaggactgcaggaagctcagtatcgtgtggtaacagagatacagaggcaaacc
ataggtttggctttacaaggtaaagatgtacttggagctgctaagactggatcaggcaaa
acgttggcttttattgttccagctttggaactcctctatcgccagcagtggacttcagct
gatggcctgggggttttgataatatcacctacccgggagctggcataccaaaccttcaag
gttctgcgtaaagtggggaagaatcatgagttctcagctggccttatcattggaggaaag
gatctaaaagaagagtctgaaagaatccaccacataaatatgctaatttgcactccagga
cggcttttacaacacatggatgaaacttcatatttctatgcatctgatctgcaaatgttg
attcttgatgaagctgacagaattctagacatgggctttgctgatacaatgaatgcaata
atagaaaatctacctaaaaaacgccagaccttgcttttttctgcaacacaaacaaaatcg
gtgaaggatcttgcacggctgagtctgaaagatccagaatatgtttgggttcatgaaaaa
gccaaattcagtaccccagcaactttggatcagaactatgttgtctgtgagcttcaacaa
aaagtaaacatgttatactctttcctgagaactcatttgaaaaagaagagcattgtgttt
tttgcaagctgtaaagaggttcagtatctgttcagagtgttctgtaagcttcagcctggt
cttcctgtcctggcactccatggcaagcagcagcagatgaagagaatggaagtctacact
tgttttattcggaaaaaggcagcagtgcttttcgctacagatatcgcagctcgtggcctg
gattttccagcagtgaattgggtcattcagtttgattgtccagaagatgcaaacacatac
atccacagagtgggaagaacagccaggtacaaagaaggcggtgaagctttgttagtattg
cttccttcagaagaaaaaggtatggtggaacagctggcacagaggaaagtacctatcagt
gaaatcaaaattaatccagaaaaacttacagacatccaaaagaggatgcaagcgttctta
gctcaagatcaggagttaaaagagaaagctcaaaggtgttttgtatcctacttgcgttca
gtttacttaatgaagaacaaggaagtatttgatgttttcaaattgcctctagcagaatat
gccctatcacttggtcttgcaatggcacctcgtgtgagattccttcaaagagttcggaag
cagctgtgtgcaaatgaggcagccaatgggacggaccacttggaggagacagagcagaat
gagaatacgctcaccttggtaaacgaagcagtggagaaatgtggaactgatttcagtgga
aaaacatctgttaaccaaacaaaggaaaagcagagaagaaaagaaattgaggaatgttct
gcttccagtggaattgctgaggagagtggtgagtctgaggatgaattgaaagagctgtct
gaggaggaggaaaaagaagttcatgtacctaacagggtaccaaactcggactccatgcag
ttctttgaagatgatgatgatgaggatgataccgaaggtcttgatttgctaacagtgaaa
caacgggatgtttttggtgtggaagctaaagataatccagcaccgaccacgtcaaaatca
aagatgaagaaaaaaacaactaagacccaagaagccaaaaaaatcttgaagaagaaattt
aaagttaacacaaaaatagttttcactgaagaaggagagttagtgcagcagtggccacct
gtgcagaaatccaatttggcgcaagcagatgaggaagatgatgccagtggtatcaaccta
gataaagcaaaagaaatactgcgtgaagaagacaagtttgacaaagaagaatacaggaag
aaagtaaaggaaaagcacagggagaagaggctaaaagaaaaagcagcaagaagagaagcc
aggaataagaatgcacaggctgaagaggaaacagtggcctttcttgctcacagtggaagt
gaagatgagtttgatcccagcactctcccagatcctgataaatacaaagactgtgatgta
gagcaagattcagaaagtgaagacaactatagtgaacttgaggagaagactggaagaaag
aagagaagctatagcaacagtgccacagcagaagaaatgccactgaaaagaaagaagatg
caattcagccaagaggaggacccctgtttgccattagatactgggctttctttggcagag
gatgaagagcttgtactgcatctgctcaacagtcacaactaa
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