Cinclus cinclus (white-throated dipper): 134041194
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Entry
134041194 CDS
T10813
Symbol
RTTN
Name
(RefSeq) rotatin
KO
K16484
rotatin
Organism
ccic Cinclus cinclus (white-throated dipper)
Brite
Cilium and associated proteins [BR:
ccic03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
134041194 (RTTN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
134041194
NCBI-ProteinID:
XP_062343573
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All DBs
Position
1:96226388..96304118
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AA seq
2230 aa
AA seq
DB search
MELSALVRKLGHELTEIRERSLKTILFKLDHNLISYADLVHEKALFRNLLEWFNFPVVPI
KEEVLNFVNSLIKHPPAAQKMIGIGAVEFFSQLRSDVDPNLQAIIDGIVDGLFFLPSELP
SSSSVCYQAHSQPSVDQPVLPQEELFTGYFCQSRSHLPHLEISPKRTVGMCMKCLKFSTF
PWLTLTSTDRHVLSSNESSLGSNNQSLIWNTCELLQDVIMQDFPAEIFLQRPKIVQSLLS
LLNLAFAGDGRHQLALQAVSCLQQLCSFLRSRLNFHRDPSFSSSEQGTASQNSSISYCQE
ARGAPRSQNPSPGSSSPRPSVIGRTVQRPRGDGQDWDAVSSSGNSTQANANSRISLHSPF
EVGHIDLPDIENEDTLELQMKQLSLPQFCVSILENAIPLLRTGSRRVTMEVLELLVEDMA
LIGDAISENVWEDDSLFALELKDKLLLVLGLLGETILYHKSNISAEQPKVMLVHHRMAFI
SISLFTVRLLQILLPVEKASKVTQKSLLNALFLLSLDMSFSLEYPSMHESIAAYLEQMST
ENYSIYKQVSEAVYSIECTCSFMVEVHKEGDKNLSELLELADQALSSLPFHLHFPLLEEC
IHICSNIWKSAEANSLLQAEGQKLLLHLLSHPLLNIKAEAYRCCLEVVKDCLGIHNIAKS
VPSICHGVHFLLHPKVLYEICTFGLQEDKNEVNSKAKAILIHLLQGRLMMEVLTWNKFIE
ALCPVIPVLQGYADTKDTLGKCILSLSETTSDKGEGVLPGTRRLQAALRLLFSKKQLVRS
VAAKHLAFHLHSEEGANLKRPCLDGNVLSSISNLFILGGAMELKMDDKMNSVIKAETVEK
LYDILTSGAVDLVLRKSAAEQLAVILEDTKMHDIVKKLGVIEKILAYLNECVHVDGKLME
SIVVPCLTLLRKIVCADPVVRLSLAQQPSLLLLLFRVSLILQSDRAVLVETTVLLCLLLF
DEVARAETWYEKASNNTEVPAFSLPVAVVRRYHLPVRITAHHVVSPHTVVVPLSSECLAM
KPVSDMLKTAWNLSWYHGIENLLQLINYEKEAEIFLDSLKLSSEDILILKITHTNYGLQD
CLTLIIQAASHRDVRTALTRLSFYVLNDRLALKCSSGPCGTTLKSFVWQKAMNRFLQVLP
ASVEDEKLLVDVLRFLNKLLRDQKSNLDSDHLKWILKSLLKNQPRSLIGLLVRPESQMQD
EIDETQAAVRQRLDKELIRLFNVLLVCSVSVTDREGLELAGSFRTELALKLLQCLRLTDA
PHFYGLPSLERALQGMVHVTALPGWSTYCATVEPVTIHKKYLTGLLEVISSFYVEWGGNA
MSFMGKGVTKSTVLCLLHLSHEMMAQAKDMDWISLWSLPYDNSEEQVPSHLGLAWLVPLW
VDRDPEVRFTALGIGSALTSLETGCIALAESCQNISGGLWGTVINILLDQSECSMVRREA
AFILQNLLVIPIPTEDTKDCIWQGPCVHDEESGLSQTGIPALKALLYHCQFYEHVNQMVK
HCYLGCYMFDLNSYKEDKLNTEKGDITDFDDSLNLWKAPPSQSKSSHSHSTSETMILSAS
PSLGSVTELQVAVPSSASFIPETVVDRLTAQGQSDTTITESPSQHDSPMSAALSKQRAVI
TPALLSAVCSLLHNLLVVMPKDTGIALQQTHLLTTLSSLVSANLVERCILELKAPLGHRC
HMEHVKAQVMLLLQYLSSLARLLKSCLLVDCHLLSQDELLKPLLANTFRILTIRPKDGLD
AELTSVLHETWVDSFSLLAALLWKSGQISFPSVTAALANHCTAIIDTISDCTHLSITYPA
LYVASLQFLSVLLNEEGRKQLEDKHSVCQNPTISFLLDHTGCQAPVTQLTALIIQVCERK
SSKDVLKEVATNALLSLLAVSKNAQKCALEADLIDSCIENMKHIHAQLNLDSLKPGKAQR
KKEDNLIKELRCSMQLLRNCLFQNEECKMAALKAHLVPVLHSLWPWLLADDSSMQIALHL
LCVYTANYPTGCASLCWATGGQSSLPSARSAGGSSLMHYVLKLASHVTNNNSSVQQVVFC
LISNLALSHDCKGIIQKSNFLQNFSLSLPKGSNKNSGNVSTLWLKLLLNISFEEDGQQML
MKINGFLDQITEMCKYKHKSSQHLALLILHNICFSPANKPKILGNDQAIAVLSACLESNS
PAVQRIGAASLWALLHNYQKAKVTLKNPSIRRRIDEAYSLVKKSSPQPEEDELHAYHLKC
LETLVQLLDC
NT seq
6693 nt
NT seq
+upstream
nt +downstream
nt
atggagctgtcggcgctcgtcaggaagctcggtcatgaactgacagagataagagagcga
tctttgaagactattctgtttaaactagaccacaacttgatttcctatgctgatctggtc
cacgaaaaagcactttttcgtaaccttttggagtggttcaatttcccagtcgtaccaata
aaagaggaagtattaaattttgtgaacagtttgatcaagcatccacctgctgcccagaaa
atgattggaattggtgcagtggaattcttctctcagcttcgctccgatgtggatccaaac
ttgcaggccataattgatgggattgtggatggactgttctttcttccttctgaactccct
tctagttcttcagtgtgttatcaagctcactctcagccttcagtagatcaaccagttctg
cctcaggaggaattattcactggatatttttgtcaaagtagaagtcatctgccacactta
gaaatatctcccaaaagaacagttggtatgtgtatgaaatgcttgaaattttccacattt
ccttggctaactctgacttcaacagatagacatgttctttcctcaaatgaaagctctttg
ggaagtaacaaccaaagtttaatttggaatacatgtgagcttcttcaggatgtgattatg
caagattttcccgcggagatcttccttcaaagaccgaagattgtacagagccttttgtct
cttctaaacctggcttttgcaggagatggaagacaccagttggctttgcaggctgtgtcg
tgcttgcaacagctctgcagcttcttgagaagtaggcttaacttccacagagatccaagt
ttttcttcctcagagcaaggcacagcttcccagaattcatctatatcttactgtcaagaa
gcaagaggtgctccacgttctcagaatccatcacctggaagtagtagtcctcggccctct
gtaattggacggactgttcagcgtcctagaggagatggtcaagattgggatgcagtatcc
tctagtggaaacagtactcaagcaaatgcaaactccagaatctctctgcattccccattt
gaagtaggacatattgacctaccagatattgaaaatgaggacactttggaattacagatg
aagcagcttagccttcctcagttctgtgtttccatcttggaaaatgcaatacctcttcta
agaacaggcagtaggagagtgacaatggaagttcttgaattgcttgttgaagacatggcc
cttattggtgatgctatttctgaaaatgtttgggaagatgacagcctttttgcattggaa
ttgaaagacaaattgcttctggtcttgggtttgcttggagaaactatattatatcacaaa
agcaatataagtgcagaacagcccaaggtgatgctggtgcatcacagaatggcatttatt
agcatttcactcttcactgttagattgctccaaatacttctccctgtagaaaaggctagt
aaagttacacaaaagagtttgctgaatgctttgtttcttctctcactggatatgtcattc
tccttggaatacccaagcatgcatgaatccattgcagcctatctggagcagatgagtact
gagaactacagtatttataagcaagtttcagaagctgtgtattcaattgaatgcacttgt
agctttatggttgaagttcataaggagggggacaagaatctttctgaattactggaattg
gcagatcaggcgttgagtagtctacccttccacttacactttcccttgcttgaagaatgc
attcacatatgctccaatatttggaagtctgccgaggccaactcattgcttcaagcagag
ggccagaagttgcttctccatctattgtctcatcctttgttgaatataaaagctgaagcc
tatcgctgctgtttggaagtggttaaggattgtttaggtattcataatattgcaaagtcc
gtgccttcaatctgccatggagtacattttcttctacaccctaaagtgttatatgaaatc
tgtactttcggcctacaggaagataagaatgaggtgaactctaaggccaaggccattctg
atacatctgttgcaaggacggttaatgatggaagtattgacttggaacaagtttatcgag
gccctctgtcctgtcattcctgttttacagggttatgctgacacaaaagatactttaggt
aaatgcatcctctctttgagtgaaacaacctctgacaaaggagagggcgttctcccagga
actcgcagactacaggctgctctgcgccttctcttctcaaaaaagcagttggttcgttct
gtagcagctaaacatttagcattccatcttcacagtgaagaaggggcaaacctgaaacgc
ccatgtctggatggtaatgtcctttccagcatttcaaacttatttattctaggaggagct
atggagctaaaaatggatgataaaatgaactcagtaatcaaggcagaaactgttgaaaag
ctgtatgatattttgacttctggtgctgttgacctagttttacggaaatctgcagctgag
cagctggctgtcattttagaagacaccaaaatgcatgacattgtgaaaaagttgggtgtg
atagaaaagatcttggcctaccttaatgagtgtgtacatgtggatggcaagcttatggaa
tccatagtggtaccgtgtctgacgctcctgcgcaaaattgtgtgcgctgacccagttgtt
cgcctgtccctagcacagcaaccttctttactgcttctgctattcagagtttccctgata
ctccaaagtgatcgtgctgttttagttgaaaccacagtattgctttgtcttctgctgttt
gatgaagtagcaagagcagaaacatggtatgaaaaagccagtaataatactgaggtacct
gccttcagtttacctgttgctgttgttagaaggtaccatctcccagtcaggatcactgct
catcatgtagttagccctcatactgttgtggtgccattgtcttctgagtgcttggctatg
aaacctgtgtcagatatgcttaagacagcttggaatctgtcatggtaccatgggattgaa
aatctactgcagctgataaattatgagaaggaagcagaaatatttttagactctctaaaa
ctttcctcagaagacattcttatattgaaaataactcacacaaactatggactgcaggat
tgtcttactttgatcattcaggcagcatcccacagggatgttagaactgctctcactagg
cttagcttctatgtcctgaatgacagacttgcattaaaatgcagttctgggccttgtgga
accactttgaaaagctttgtttggcagaaagcaatgaacaggtttctacaagtgcttcca
gcttccgtggaggatgaaaagcttttggtagatgtcctaagatttttaaacaaattgctt
agagaccagaaatcaaatctggattcagaccatctaaagtggatcttgaaatcattgcta
aaaaatcagccaagatcccttataggcctcctggtacgaccagaatcccaaatgcaggat
gaaatagatgaaacacaggctgctgtcaggcagcgtctggataaagaactcattcgtctt
tttaacgtgttgttggtttgttctgtgtcagtgactgacagagagggcttggaacttgct
ggctcattcagaacagagctggctctgaaactgcttcagtgcttaaggctaacagatgca
ccacatttttatggacttccttcactggagagagcattacaaggaatggttcatgttact
gcacttccgggctggagtacctactgtgctacagttgaacctgtcacaattcataagaaa
tacttaacaggtcttcttgaggtcatctcatcattttatgttgaatgggggggaaatgcc
atgtccttcatgggaaaaggtgtaacaaaaagcacagtcctttgcttgcttcacttgtct
cacgaaatgatggctcaagccaaggatatggactggatatctctttggtctttgccatat
gataatagtgaagaacaagttccgtctcatctaggtctggcatggctggttcctttatgg
gtagacagagatcctgaggtcagatttacagcacttggaataggatcagctcttacatct
cttgaaacaggatgtattgctttagcagaaagctgccagaatatttcaggaggcctgtgg
ggaacagtgataaacatccttctggatcagtctgaatgtagcatggtgcgcagggaggct
gcttttattctacaaaatctacttgtgattccaatccctacagaagacacgaaagattgt
atttggcaaggtccttgtgtacatgatgaagaatctggcctctctcagacaggaatacct
gctcttaaagcccttttgtatcactgccagttctatgaacatgtgaatcagatggtgaaa
cactgttacctaggatgttatatgtttgatttgaactcttacaaggaagacaagctcaac
acagaaaaaggtgatataactgattttgatgattctctcaatctttggaaggctccacct
agtcagagcaaatcttcacattctcactcaacatctgaaactatgattctgtctgcatcc
ccatcactggggagtgttactgagcttcaggtggcagttccaagttcagccagttttatt
cctgaaactgtggttgatcggcttacagcacaaggtcaaagcgatacaaccataacagaa
tctccaagtcaacatgattctcctatgtcagctgctctgtctaaacagcgtgctgtaatc
acacctgcccttttgtcagctgtttgcagccttctgcacaatctgctggttgtcatgcca
aaagatactggaattgctctccaacaaacgcatttgctaacaactctcagcagtcttgta
agtgctaatctggttgaaagatgcatcttggaactgaaagctccattgggtcatcgatgt
catatggaacatgtaaaagctcaggtcatgttactacttcagtacttgtcatctttggcc
aggcttctaaaatcgtgtttattggtggactgtcatcttctaagccaggatgaattgctg
aaacctctcctggcaaataccttcaggattctcaccatacgtcccaaagatggcttagat
gccgagttaacatctgtacttcatgaaacatgggtagactctttcagccttctagctgca
ttactgtggaaaagtggccagatatcttttccatctgtgacagcagcccttgcaaatcat
tgtacagcaataattgataccatttctgattgtactcatctgtctatcacatatcctgct
ttatatgtggctagtttacagttcctctctgtccttttgaatgaggaaggaagaaaacag
cttgaggataaacatagtgtatgtcagaatccaactattagctttcttctggatcacact
ggatgccaggcaccagtaactcaacttactgcattaattattcaggtttgtgaaagaaaa
tcttcaaaagatgtgctgaaagaagttgctacaaatgcattgttatctctgttagctgtc
agtaaaaatgcccagaaatgtgctttggaagctgacctgatagacagttgcatagaaaac
atgaagcacattcacgcacagctgaacttggattccctaaagcctgggaaagcacagaga
aaaaaggaggataaccttatcaaggagttaaggtgttctatgcagcttcttagaaactgc
ctctttcaaaatgaagaatgcaaaatggcagcactcaaagctcatcttgttcctgttctg
cattctttgtggccatggcttttagcagatgattcctcaatgcaaatagctctgcatttg
ctttgtgtctacactgcaaactatcctacaggttgtgcttcactttgttgggccactggt
ggacaatcatcacttccatctgcacgaagtgcaggtggcagttcattaatgcattatgtc
ttgaagttggcttcccatgtgacaaataataacagctcagttcagcaagtggtcttttgt
ctaatatctaaccttgctctgtctcatgactgtaaaggcattattcagaagagtaacttc
ctgcagaacttctctctttcattgccaaaaggaagtaataaaaattccggtaatgtgtct
actctctggctaaagctgctactgaatatatcttttgaagaagatggacaacagatgctc
atgaagataaatgggtttttagaccagatcactgaaatgtgtaaatacaagcacaagagc
agccaacatctagctcttcttattctacataacatatgttttagtccagctaataaacca
aagatattaggtaatgatcaagccattgcagtactgtctgcctgtttggaaagtaacagt
cctgctgttcagagaataggagcagcttcgctttgggctttgcttcacaactatcagaag
gcaaaagtgactttgaagaacccatccataaggagaagaatagatgaggcttattcttta
gtgaagaaaagttctccacagccagaagaagatgaactgcatgcctaccatctaaaatgt
ttagagactctagtgcagcttctcgattgttaa
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