Cinclus cinclus (white-throated dipper): 134041211
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Entry
134041211 CDS
T10813
Symbol
PAN3
Name
(RefSeq) PAN2-PAN3 deadenylation complex subunit PAN3 isoform X1
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic03018
RNA degradation
Brite
Messenger RNA biogenesis [BR:
ccic03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
134041211 (PAN3)
mRNA degradation factors
3'-5' decay
Pan complex
134041211 (PAN3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
134041211
NCBI-ProteinID:
XP_062343604
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Position
2:49270467..49349755
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AA seq
901 aa
AA seq
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MNSSGLPCSSPSPVVGPPPGAGVGVAGPAAGGAGAGGGAVKLKFCRYYAKDKTCFYGEEC
QFLHEEPGAAPAGPGPAASPLGGLPLGIPPPAAGPGYSAHGASSGPAAAVVGPKKAELGA
GGGGGGGGGLDGPRLAIPGMDGGGLADANLTDSYFSTSFIGVNGFGSPAETKYPMMQRMT
NSSSSPSLLNDSAKQYAGHDPLTSPNSSLFNDFAALSVSQRRKLAKPAFPSFITDLEDRY
NTVLPRKYRLGMLDERIVPVGSKARKSKNPIGCLADRCKTGVPINMVWWNRVTENNLQTP
NPSASEFIPKGGSTSRLSNVSQSSMSAFSQALFSHPSMGSPATAGLAPGMSLSAGSSPLH
SPKITPHTSPAPRRRSHTPNPANYMVPTSASASVANTVSQPPSTGQVIQKETVGGTTYFY
TDTTPAPLTGMVFPNYHIYHPAAPHVAYMQPKANAPSFFMADELRQELINRHLITMAQID
QADIPAVPAEVDSYHSLFPLEPLPPPNRIQKTSNFGYITSCYKAVNSKDDLPYCLRRIHG
FRLVNTKCMVLVDMWKKIQHSNIVTLREVFTTKAFGEHSLVFAYDFHAGGETMMSRHFND
PSADSYFTKRKWGQHDGPLPRQHAGLLPESLIWAYIVQLSSALRTIHTAGLACRVMDPTK
ILVTGKTRLRVNCVGIFDVLTFDNSQNNPLALMAQFQQADLISLGKVVLALACNSLSGIQ
RENLQKAMELVTINYSSDLKNLILYLLTDQNRLRSVNDIMPMIGARFYTQLDAAQMRNDV
IEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWSETGDRYLLKLFRDHLFHQVTEAG
TPWIDLSHIISCLNKLDAGVPEKISLISRDEKSVLVVTYSDLKRCFENTFQELIAAANGQ
L
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atgaacagcagcggcctgccctgctcgtcgccgtcgccggtggtggggccgccgccgggg
gcgggggtcggcgtggcgggtccggcggccggcggggcgggggccggcggcggggccgtg
aagctgaagttctgccgctactacgccaaggacaagacctgcttctacggcgaggagtgc
cagttcctgcatgaggagccgggcgccgcccccgccggcccggggcccgctgcatccccc
cttggcgggctcccgctcggcatccccccgcccgccgccgggccgggctactcggcgcac
ggggccagctcgggcccggcggcagcggtggtggggcctaagaaagccgagctgggggcg
ggaggcggcggaggcggcggcggggggctggatggcccgcggctggcgattcccggaatg
gatggtggtgggttagctgatgctaatctaacggattcatactttagcaccagcttcatt
ggcgttaatggatttggaagtcctgctgaaacaaagtatcccatgatgcagaggatgaca
aatagcagcagctcccctagccttcttaatgacagtgccaagcagtatgcaggccatgat
ccactaacttcaccaaattcatccttgtttaatgactttgctgccctcagcgtgtctcaa
aggaggaagctggcaaaaccagcatttccttcgtttatcactgacttggaggacagatat
aacacagtcttgcccaggaagtatcgactggggatgctggatgagaggatagttccggtg
ggatcaaaagcaagaaaatcaaagaaccctatcggctgtctggctgacaggtgtaaaaca
ggagtacccatcaatatggtttggtggaacagagtcacagaaaacaatttacagacacca
aatccttctgcaagtgagtttattcctaaaggaggatcaacctccaggctgagtaatgta
tcccagtcaagtatgtctgccttctctcaagccttgttctctcacccctccatgggaagt
cctgctactgctgggttagcaccaggaatgtcactgtcagcaggatcttctcctcttcat
tctcccaaaataactcctcatacatctcctgctcctcgaagaagaagtcatactcctaac
ccagcaaactatatggtgcctactagtgcctctgcatctgtcgctaacactgtctctcag
cctccatctactgggcaggtgatccagaaggaaacagtgggtggaacaacatacttctac
actgatacaactccagcacctctcacaggaatggtttttccaaactaccacatctaccat
ccagctgcacctcatgttgcttacatgcagccaaaagcaaatgcaccttccttcttcatg
gcagatgagctcagacaggagctcatcaacagacacttaataactatggcccagattgat
caggctgatattcctgcagttcctgcagaagtggacagctaccacagtctctttcctttg
gaaccactgccaccgcccaatcggatacagaaaacgagcaactttgggtacattacatcg
tgctataaagctgtaaatagtaaagatgatctgccatattgccttcggaggatacacggt
tttcgtcttgttaacacaaagtgtatggtattggttgacatgtggaaaaagattcagcac
tcaaatattgtaactttgcgtgaagtgtttaccactaaagcttttggagaacactctcta
gtgtttgcatatgattttcatgctggaggagagactatgatgagcagacacttcaatgac
cctagtgctgattcctatttcacaaaacggaaatggggtcagcatgatggacctctgcca
cggcaacacgcggggttgcttccagagtccttaatatgggcatatattgtgcagctcagc
tctgccttaaggaccattcacacagcaggactggcatgcagagttatggatccaacgaag
attctggtaacaggcaaaacaaggttacgagttaattgtgttggaatctttgatgttttg
acatttgacaacagtcaaaataatccactggcattaatggctcagtttcagcaagcagat
ctgatctccctggggaaagttgtgttggctttggcttgcaattctttatcaggaattcag
agagagaatttgcagaaagcaatggaactggtgacaatcaactattcctctgatctgaag
aatctgattttgtatttgctgactgaccaaaacaggcttcgcagtgtaaatgatatcatg
cctatgattggtgcacgattctatactcagttggatgctgctcagatgcgaaatgatgtc
atagaagaagacctagcaaaggaggtgcaaaatggaaggttgtttaggcttctggcaaaa
ctgggaacaatcaatgagaggccagagtttcagaaggacccaacgtggtcagaaactgga
gacaggtatttactaaagctctttcgagatcaccttttccatcaggtgacagaagcgggt
actccttggattgacctcagtcacattatctcatgtcttaacaagttagatgctggtgtg
ccagaaaaaataagcctcatttccagagatgagaagagtgtacttgtggtaacttacagc
gatttaaaacgctgctttgaaaatacttttcaagaactgattgcagccgcaaatggtcag
ttgtag
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