Cinclus cinclus (white-throated dipper): 134041222
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Entry
134041222 CDS
T10813
Symbol
EXOSC8
Name
(RefSeq) exosome complex component RRP43 isoform X1
KO
K12586
exosome complex component RRP43
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
134041222 (EXOSC8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccic03019
]
134041222 (EXOSC8)
Messenger RNA biogenesis [BR:
ccic03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
134041222 (EXOSC8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
134041222
NCBI-ProteinID:
XP_062343633
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All DBs
Position
2:52814049..52823445
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AA seq
277 aa
AA seq
DB search
MAAAFKTVEPLEYYRRFLKENCRPDGRELGEFRTTTVNIGSITTADGSALVKLGNTTVIC
GVKAELAAPAVDSANKGYIVPNVELPSLCAERFRSGPPGEEAQAASQFIADVIENSQMIV
KEDLCIANGKLAWVLYCDIICLDYDGNLLDASVFALLAALKNVQLPLVTINEETGLSEVN
FKQKNPLIIRKHPVATSFAIFDDTLLIVDPTAEEEDLATGTVTIVTDEEGRLCSVHKPGI
FKFTTKKPMQMMMLGQEKIIHQVCFVRCGCFMVTVSA
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcgttcaaaactgtagaacctttggaatattacaggaggtttttgaaagag
aactgtcggcctgatggaagagagttaggtgaatttcggacaaccactgtcaacataggt
tcaattacaactgcagatggttctgccctggtgaagttaggaaataccacggtgatttgt
ggagtaaaagcggaacttgctgcacctgcagtggattctgctaataagggatatattgtt
ccaaatgtagagctgccatccctctgtgcagagaggtttcgctctggaccacctggtgaa
gaagctcaagcagcgagccagttcattgcagatgtgattgaaaattcacagatgatagtg
aaagaagatctgtgtattgccaatggcaagcttgcttgggttttatactgtgatatcata
tgtctggactatgatggaaaccttctggatgccagtgtctttgctttgttggcagcatta
aaaaacgtgcaattgccgttggttacgataaatgaagaaactggtttatcagaagttaat
ttcaaacagaagaaccctttgattatcagaaagcatccggttgccacatcatttgctata
tttgatgacacattactcattgttgatccaactgctgaagaagaagatttagcaactgga
acagtaaccattgtaactgacgaagaaggcagactgtgttctgtccataaaccaggtatt
tttaaatttactacaaagaaacctatgcagatgatgatgttgggtcaagaaaagattata
caccaggtttgctttgtgagatgtgggtgctttatggtaacagtgtctgcttga
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