Cinclus cinclus (white-throated dipper): 134041273
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Entry
134041273 CDS
T10813
Symbol
TBC1D4
Name
(RefSeq) TBC1 domain family member 4 isoform X1
KO
K17902
TBC1 domain family member 4
Organism
ccic Cinclus cinclus (white-throated dipper)
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccic04131
]
134041273 (TBC1D4)
Membrane trafficking [BR:
ccic04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
134041273 (TBC1D4)
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
134041273 (TBC1D4)
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
134041273 (TBC1D4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
DUF3350
PID
DUF4249
Laminin_I
Motif
Other DBs
NCBI-GeneID:
134041273
NCBI-ProteinID:
XP_062343757
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All DBs
Position
2:complement(68541540..68639686)
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AA seq
1286 aa
AA seq
DB search
MEKRGEGEPLSHPLEPEPEPEPQPAPPGEKRFRLWYVGSSCLDRRTTLPMLPWLVAEIRR
RGQRQEPGGAPGSGVPAREVLLLLGSPTLRCVPASPGPAAGPGRSASPAPAVFIFEHKAQ
HIARFIHNSHDLTYFAYLIKAQPDNPDSPMACHVFRATDPNQVPDVISSIRQVSKAALKE
DAKPSKDNEDAFYDSQKFEVLYCGKVTVAHKKAPSTLIDDCIEQFSLHERQRLKLLNEQR
NNESSLDLPLCEENVPASPLDSPFEELDSPNSPSGHAAMFTIGSQTNLTNLASTRGFFPE
RILEDSGFDEQQEFRSRCSSVTAVMQRKVHDTNLKIQSRRRHASAPSHVQPSDSEKNRTM
LFQVGRFEVNLISPDTKSVVLEKNFKDISSCSQGIKHVDHFGFICRESVEPGLSQYVCYV
FQCASESLVDEVMLTLKQAFSTAAALQSAKTQIKLCEACPMHSLHKLCERIEGLYPPRAK
LVIQRHLSSLTDNEQADIFERVQKMKPDNDQEENELVILHLRQLCETKQKTHIHIGEAPL
VISNSAIPESTTSGGRFKLDILKNKAKKSLTSSLENIFSRGANRMRGRLGSMDSFERCSS
LVSDRDTSPGDSPPATPPASPVSSAWQTFPEEGSDSPQFRRRAHTFSHPPSSARRRITFQ
NGRSQSARSPLLRQNCVEATSPVVGFRRALSESESASPGLPSSLSAPSFLKTFYQGSGRL
LQHSESDLSKSDGEGKKRTSACSSESLNAAGATLTPRRISWRRRIFLQVASPMNKSPSKM
QHPDGHDGSELLPLSLLAPPLEEDPLVLVLQNEDGSDKTGERKNSEELQSLWRKAIHQQI
LLLRMEKENQKLEEASRDELQSRKVKLDYDEVGTCQKDAINIWDKKLLNCRAKIRCDMED
IHSTLKEGVPKSRRGEIWQFLAVQHRVRHRLPNKQQPPDISYKELLKQLTAQQHAILVDL
GRTFPTHPYFSTHLGAGQLSLFNLLKAYSLLDKEVGYCQGISFVAGVLLLHMSEEQAFEM
LKFLMYDLGFRKQYRPDMMSLQIQMYQLSRLLHDYHRDLYNHLEENEISPSLYAAPWFLT
LFASQFSLGFVARVFDIIFLQGTEVIFKVALSLLSSQETSIMGCENFENIVDFLKTTIPD
MTKPQMEKIITQVFEMDISKQLHAYEVEYHVLQDELQENVSPCDEGEPLEKLERANNHLK
RQNMDLLEKLQVAHAKIQSLEASLESVLTRENKMKTVIQSLEQEKITYQKTLEQIVKYLP
AEVLPDCELLLKEVNYNPNNKIWSKP
NT seq
3861 nt
NT seq
+upstream
nt +downstream
nt
atggagaagcgaggggagggcgagcccctctcccaccccctggagcccgagcctgagcct
gagccgcagccggcgccgccgggggagaagcgcttcaggttgtggtacgtgggttcgtcg
tgtctggaccggcggaccacgctgcccatgctgccctggctggtggccgagatccgccgc
cgcggccagcggcaggagcccggcggcgccccgggcagcggggtgccggcccgagaggtg
ctgctgctgctgggctcgcccacgctgcgctgcgtgcccgccagccccggccccgccgcc
ggccccggccgctccgccagccccgcgcccgccgtcttcatcttcgagcacaaggcgcag
cacatcgcccgcttcatccacaacagccacgacctcacctacttcgcctacctgatcaag
gcgcagcccgacaaccctgactcccccatggcctgccacgtcttccgggccaccgacccc
aaccaggttcctgatgtcatcagcagcataagacaagtctctaaagcagcactgaaagaa
gatgccaaaccaagtaaggataatgaagatgccttctatgactcccaaaaatttgaggtc
ttgtactgtggaaaggtgacagtggctcacaagaaagctccctccacactaattgatgac
tgcatagagcaattcagcctccatgagcgccagcgcctcaaactgttaaacgagcagcgg
aataatgagtcaagtttggacttgcccctgtgtgaagaaaatgtgccagcttctcctctg
gacagcccgttcgaggagctggacagcccaaacagcccttcagggcatgctgcaatgttt
acaattggcagccagaccaacctgaccaacctggccagcactcgtggcttctttccagag
agaattttagaggactctggctttgatgagcagcaggagttccgctcccggtgcagcagt
gtcactgcagtgatgcagagaaaggttcatgacacaaacctgaaaatacagtcccgcaga
aggcatgcaagtgcacccagtcatgttcagccctctgattctgagaagaacaggacaatg
ttgttccaggttggaaggtttgaagttaacctcatcagtccagacaccaaatctgttgtg
cttgaaaagaattttaaagatatctcctcatgttctcagggtataaaacatgttgatcac
tttggttttatttgccgggaatctgtggaacctgggttaagccagtatgtttgctatgtg
ttccagtgtgcaagtgagtctctggttgatgaggtaatgctgaccctgaagcaagccttc
agcactgctgcagccctgcaaagtgccaagactcaaattaaactgtgtgaggcctgccct
atgcattcactgcacaaactttgtgaaagaattgaaggactctatccaccaagagccaaa
cttgtaattcagaggcatctgtcatcactaacagacaatgagcaagcagacatttttgaa
cgtgttcagaaaatgaagcctgacaatgaccaggaagaaaatgagcttgtgatcttacat
ctccgtcagctctgtgagactaagcagaaaacacacatccacattggtgaagcaccgctg
gtcatttctaacagtgcaattccagaaagcaccaccagtggtggccggtttaaacttgac
attctgaaaaacaaggcaaagaaatccttgactagctctctggaaaatatcttctcaagg
ggagccaacagaatgcgaggccgcctgggaagtatggacagctttgagcgctgcagcagc
ctggtttctgacagagacacttctccgggcgattccccgccagctactcctccagcgtcc
cccgtgtcctcggcctggcagacgtttcccgaggaaggctcggactcccctcagttcagg
aggcgtgcacacaccttcagccacccgccctccagtgccagacggaggataaccttccag
aacggcaggtcccagagcgcccgctccccgctgctgcggcagaactgcgtggaggccaca
agtcctgtggtcgggtttcgtcgcgctctcagtgagagtgaatctgcgtcacctggtctc
ccctcctctctctctgccccttctttcctgaaaaccttttaccagggctcaggaaggttg
ctccagcattcagaaagtgacctctccaagagtgatggggagggaaagaaaagaacatca
gcctgcagcagtgaatctctaaatgctgcgggggccacgctcacacctcgccgcatctcc
tggcggcggagaatattcctgcaggtagcttcacctatgaataaatctccttccaagatg
cagcatccagatggtcatgatggaagtgaattgttacccttatcccttcttgctccaccc
ctggaggaggaccctcttgttctagtgttgcaaaatgaggatggttcagataaaactgga
gagaggaaaaactcagaagaactacaaagtctatggagaaaagccatccatcaacaaatt
ctgttacttcgaatggaaaaagaaaaccagaagctggaagaagcaagcagagatgagctc
caatcaagaaaagtaaaactggattatgatgaagttggcacatgtcagaaagatgccata
aatatttgggataagaagttactaaactgcagagccaaaatccgatgtgacatggaagat
attcattccactttaaaagaaggtgtaccaaaaagtcgtcggggagaaatttggcagttt
ttggctgtgcaacaccgagtcaggcacaggctgccaaacaagcagcaacctcctgacatc
tcttacaaagaacttctgaaacaactgactgctcaacagcatgccatcctagtagatctg
ggacggacattccctacgcatccttacttttccacacacctgggagcaggacagctgtca
ctgtttaatctcttgaaagcgtactctttgctggacaaagaagtgggttattgtcaaggt
ataagttttgtagctggagtgctgcttctgcatatgagtgaagaacaggcctttgaaatg
ctgaaattcctcatgtatgaccttggcttccgtaaacagtacaggccagacatgatgtca
ctacagattcagatgtatcagctctcaaggcttctacatgattaccacagagacctgtat
aatcatcttgaagagaatgaaatcagtcccagtctttatgctgcaccatggtttcttaca
ctgttcgcatctcaattttcattaggatttgtagccagagtgtttgacattatttttctt
caaggaacagaagtcatatttaaagtagcactgagcctacttagtagtcaagagacatct
ataatgggatgtgaaaattttgagaacattgttgattttcttaaaaccactattccagat
atgacaaaacctcaaatggaaaaaattattactcaggtgtttgagatggatatttcaaaa
cagctccatgcctatgaagtagagtaccacgttcttcaggatgaactacaggaaaatgtg
agcccctgtgacgaaggtgaacctctggagaagctggagagggcaaacaatcatctgaag
aggcaaaacatggatttgttagagaagctacaggttgctcacgcgaaaattcagagtctg
gaagccagtctggagagtgttttgacaagagagaacaaaatgaagactgtaattcagtcc
ctggagcaggagaagataacataccaaaagactcttgagcagatagtgaagtatttgcca
gcagaagtgttgcctgactgtgaactgcttctgaaggaagtaaactacaacccaaataat
aaaatatggagtaagccataa
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