Cinclus cinclus (white-throated dipper): 134041336
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Entry
134041336 CDS
T10813
Symbol
CUL4A
Name
(RefSeq) cullin-4A isoform X1
KO
K10609
cullin 4
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic03420
Nucleotide excision repair
ccic04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
134041336 (CUL4A)
09124 Replication and repair
03420 Nucleotide excision repair
134041336 (CUL4A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccic04121
]
134041336 (CUL4A)
03400 DNA repair and recombination proteins [BR:
ccic03400
]
134041336 (CUL4A)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccic04147
]
134041336 (CUL4A)
Ubiquitin system [BR:
ccic04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
134041336 (CUL4A)
DNA repair and recombination proteins [BR:
ccic03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
134041336 (CUL4A)
TCR (transcription coupled repair) factors
Cul4-CSA complex
134041336 (CUL4A)
Exosome [BR:
ccic04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
134041336 (CUL4A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
ADH_zinc_N
Motif
Other DBs
NCBI-GeneID:
134041336
NCBI-ProteinID:
XP_062343949
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All DBs
Position
2:complement(92075035..92109237)
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AA seq
763 aa
AA seq
DB search
MADEPQKKPHLSALVGHTNGLTKPASLAATRSTGGGGGGATASSKKLVIKNFRERPKLPD
NYTQDTWQKLHEAVGAIQSSISIKYNLEELYQAVENLCSYKVSATLYKQLRQVCEEHVKA
QILQFREDSLDSLLFLKKINKCWQDHCRQMIMIRSIFLFLDRTYVLQNSVLPSIWDMGLE
LFRNHIISDKQVQSKTIDGILLLIERERNGEAVDRSLLRSLLSMLSDLQVYKESFEQRFL
EETNCLYAAEGQRLMQEREVPEYLHHVNKRLEEEADRVITYLDHSTQKPLIACVEKQLLG
EHLSAILQKGLDSLLDENRIPDLTQTYQLFSRVKGGQQILLQHWSEYIKNFGTTIVVNPE
KDKDMVQELLDFKDKVDHIIEVCFQKNEKFINLMKESFETFINKRPNKPAELIAKYVDSK
LRAGNKEATDEELERILDKIMIIFRFIHGKDVFEAFYKKDLAKRLLVGKSASVDAEKSML
SKLKHECGAAFTSKLEGMFKDMELSKDVMVQFKQYMQNHSDPGNIDLTVNILTMGYWPTY
TPMEVHLNSEMIKLQEIFKTFYLGKHSGRKLQWQTTLGHAVLKAEFKEGKKEFQVSLFQT
LVLLMFNEGDEFSFEEIKMATGVEDSELRRTLQSLACGKARVLIKNPKGKDVEDGDKFIF
NGDFKHKLFRIKINQIQMKETVEEQVSTTERVFQDRQYQIDAAIVRIMKMRKTLGHNLLV
SELYNQLKFPVKPGDLKKRIESLIDRDYMERDKDNPNQYHYVA
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgagccgcagaagaagccgcacttgtcggccttggtgggacacacgaacggg
cttaccaagcccgcctcgctggccgccacccgctccacgggagggggaggaggaggcgcg
accgcctcctccaagaaactcgtgatcaagaacttcagagaaagacccaaattaccagat
aattatactcaggacacctggcagaaacttcatgaagcagtgggagcaatacagagtagc
atttctattaaatacaaccttgaagagctctaccaggctgttgaaaatctctgttcctac
aaagtgtctgctacactgtacaaacagctgcgacaagtctgtgaagagcatgtgaaagca
caaatccttcagtttagagaagattctttggatagtcttttatttttaaagaagataaat
aaatgctggcaagatcattgcagacaaatgatcatgatcagaagcattttcttatttttg
gatcgtacatatgtgcttcagaattcagtgcttccttctatatgggatatggggctagag
ttatttagaaaccatatcattagtgacaagcaagttcaaagcaagactattgatggaatt
ctcctgctgattgaacgagaacgaaatggtgaagctgtggacagaagtttgctgcggagt
ttgttgagcatgctctcagatctgcaggtttacaaggaatcatttgaacagaggtttctg
gaagaaacaaattgtttatatgctgcagaaggccaaagattaatgcaggaaagagaggtg
ccagaatatcttcaccatgttaataaacgtttggaagaagaagcagatagagtaataacg
tatttagatcacagcacacagaaaccactgattgcttgtgtggagaagcagctactaggt
gaacacttatcagctattttgcaaaaagggcttgatagccttctcgatgaaaacagaata
ccagatttaacccagacataccagttgttcagccgggtaaaaggtgggcagcagatcctt
ttgcaacattggagtgaatacatcaagaactttgggacaacaatagtggttaatcctgaa
aaagacaaggatatggtgcaagagctactagattttaaggataaagtggaccatatcata
gaagtgtgctttcagaaaaatgaaaaatttataaacttgatgaaggagtcctttgaaaca
tttatcaacaagagaccaaataagcctgcagaattgatagcaaaatatgtggattccaaa
ttaagagctggtaataaagaagccacagatgaagagctggaaagaatccttgacaaaatc
atgatcatatttagattcattcatgggaaagatgtgtttgaagcattttataagaaagac
ttggccaaaagactgctggttggaaaaagtgcatcagtagatgctgagaagtccatgttg
tcaaagcttaaacatgaatgtggcgctgcttttaccagcaaactggagggcatgttcaag
gacatggaactgtccaaagatgtcatggtacagttcaagcagtatatgcagaaccacagt
gacccaggaaatatagatctgacagtaaatatattaactatgggatattggccaacttac
acacctatggaagtccacttaaattcagagatgataaagcttcaagagatatttaaaacc
ttttaccttgggaaacacagtggtcgaaaacttcagtggcagaccactttagggcatgct
gtcctaaaggcagaattcaaggaagggaagaaggagtttcaagtatcactctttcagaca
ttagtactgcttatgtttaatgaaggagatgaattcagttttgaagaaattaaaatggct
actggtgtagaggacagtgaattaagaagaaccttgcagtctttagcttgtggaaaagca
cgagtattgattaaaaatccaaagggcaaggatgtagaagatggagataaattcatcttt
aatggtgatttcaagcataaattgtttagaataaagatcaaccagattcaaatgaaggaa
acagttgaagaacaggtcagcacaactgaaagagtatttcaggacaggcaatatcagatt
gatgctgctattgtacgaataatgaagatgaggaagactcttggtcataatcttcttgtt
tctgaattgtataatcagctgaaatttcctgtaaagcctggagacttgaagaagagaatt
gaatctctcattgacagagactatatggagagagacaaagacaaccccaatcagtaccat
tatgttgcataa
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