Cinclus cinclus (white-throated dipper): 134041388
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Entry
134041388 CDS
T10813
Symbol
BCOR
Name
(RefSeq) BCL-6 corepressor isoform X1
KO
K23215
bcl-6 corepressor
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
134041388 (BCOR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccic03036
]
134041388 (BCOR)
Chromosome and associated proteins [BR:
ccic03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
134041388 (BCOR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BCOR
PUFD
Ank_2
Ank
Ank_3
Ank_5
Ank_4
ANK_LRRK2
Motif
Other DBs
NCBI-GeneID:
134041388
NCBI-ProteinID:
XP_062344093
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All DBs
Position
2:complement(109991242..110049706)
Genome browser
AA seq
1766 aa
AA seq
DB search
MLSATPLYGNVHSWMSNERVRMCGINEDRKIPVNDGDAPKSRLELREENHLNHSVVDATT
AHRIDSLAALSMDRSGLMREGLRVPGSIVYSSLCGLGSEKSRDATGSIASLGFTPERNPE
IQFKSNPPEAVESAAVSGKAPNGFSAIYKTPPGIQKNSVPTGETLGLDRATGDRQSPLGV
NGASYLRLPWVNPYMEGATPTIYPFLDSPNKYSLNMYKALLPQQSTYSLPQHLAYSPVCT
NGERFLYLPPSHYVAPHIPSSLASPMRLSTASASPAIPPLVHCPDKSLSWKMGVSPGNPV
DTHAYPHIQSSKQPRVTTAKPASANLPADPALLLPHSPRPSPRLPPPPPVGDAYADFHKH
FPRITTSPSSAVTLPKPYVNIGSEFPPARLSNGKLPKGSDAGEAPLPSAPHARKAGHDRK
DSRSPPLLEKQTPTKDVTDKPLDLSAKVVDVETAGKSDHSKKIMPTVLVHGRAGGGTHLP
GSDIVQKETISPGNSCPIYRPEIISTAPSSWIVPGPSPSEEAGKNVQLKNKALDWVMPQP
RSSSCPRMGGTEAVVSSVSGTVSAGGRPASASPAPNANVDCAKTARSSAESTASVIQHVG
QPVTAPAKHSSKVAKSCGQEANFKATETALASSPIFLPPNEAFRSPPLPYPRSYLPYPVP
EGIAISPLTLHGKGHVYPHPVLLPNGSLYPTHLAPKPGLPYSLPAGRGEFMTYQDALGVG
MVHPMLLQHSALEINKEEKTERRSRSHERVRYEDPALRGRLPELLESGGKMHFEMPGDKS
VKLHQSSGHSKNSAKSDKHLFPDLLRDEQEAKSEANVTKASFATESSNQTNDPTKHKVEQ
ASQHRDFIVMREEFGRNNDVHETYNFKQAQGSSVFSLRKEDLSVSQPKERVAVQPSPVFL
ESTHESDAPALAFGKVQEDAKPFCMGTAPPSIDANQTYTKDGADDAESADGKILKPKPSK
LAKRIANSAGYVGDRFKCVTTELYADSSQLSREQRALQMEGLQEDSILCLPAAYCERAMM
RFSELEMKEREGQTATKDSEVCRFSQADWENLKGNSEKKPKSVALEDAIADQNDNDRCNF
TSTENNRGHFLETPEEKDLSNEKCYLERHSVYEKAEDQPTEDFGQHSCPRLDRKRKHSGE
RVQNDGSQNESFVDELQDEVVSKAKKKKTSKDDWPEREMTNNSSNHLEEPNCNEVTNLKV
CIELTGLHPKKQRHLQHLRELWEQQVSPERSPSGKLGRQSRKDLAEAVQPEATAKVKDFT
EERHTKKRSEAKSNRSWSEESLKTSDNEQGLPVFPVSPHMKSLSSTNANSKRQAQPSCTP
ASRLAAKQQKIKESRKTDGLYTDEEEDFQHASLLPKYSECEKPSGKRQCKTKHLALQERR
RRSSLTGDDTTDIENAEDKVTVTRKVRKRPEPSSDCDSSPAKPYEPKPYERLQQTPSLLP
VPQPTLPMASPPQETTPSRPMPPEARRLIVNKNAGETLLQRAARLGYEEVVLYCLENKAC
DVNHRDNAGYCALHEACARGWLSIVRHLLEYGADVNCSAQDGTRPIHDAVENDHLEIVRL
LLSYGADPTLATYSGRTIVKMTHSELMETFLTEYLTDLQGRSVDDPGLYWDFYGSSVCDP
KDESGFDVLANPPGPGDEDEDGFSDVFEFEFSDEPPLPCYNIQVCLSQGPRNWLLLSDVV
KRLKMSSRIFRCNFPNLEVVTITEAEFYKQTSLSQLFSCATELEAFNPESKELLDLVEFT
SELKTLLGSELHWLHPHEDPPFDILW
NT seq
5301 nt
NT seq
+upstream
nt +downstream
nt
atgctttctgcaactcccctatatggcaacgttcatagctggatgagcaatgaaagggtc
cgcatgtgtgggattaatgaagacaggaaaattcccgttaatgatggcgatgcaccgaaa
agcagactggagttgagggaggaaaatcacctgaatcacagtgtggtggatgcgactaca
gcacatcgcatcgacagtcttgcagctctgagtatggacaggtctgggctcatgcgagaa
ggactcagagtccccggtagcattgtctattccagcttgtgcggacttggctcggaaaaa
tcacgggatgctacgggttcgatagccagcctgggatttactcctgagcgaaatccagag
atacagtttaagtctaatccccccgaagcggtggaaagcgcagctgtctctggaaaagcc
ccaaatggcttcagtgctatatacaaaacaccacctggaatacaaaaaaactctgtcccg
acaggggagacactgggtttggaccgagccacgggtgacaggcagagtcctctcggtgtc
aatggtgctagttacctaaggctcccctgggtaaacccctacatggagggcgcaacgccc
accatataccctttcctcgactcaccaaataagtattcgttgaacatgtacaaggcattg
ctacctcagcagtccacctacagcttaccgcagcacctggcttactcgcccgtatgtacg
aacggtgaacgttttttatacctgcctccttcccactacgttgcccctcacatcccttcg
tcgctggcatcgcccatgaggctctcgactgcttcagcttcaccagcaatcccacctttg
gtgcactgtccagataaaagtttgtcgtggaagatgggtgtgagcccaggcaatcctgtt
gacacgcacgcctacccccacatccagagcagcaagcagccccgggtcaccactgccaag
ccagcctctgccaacttgccagcagatcctgcactcctgctgcctcactcgccccggccg
tccccccgcctccccccgcctcccccggtcggggatgcctatgctgatttccacaaacat
ttccccaggatcaccacctctccctcctctgctgttacgctcccaaagccctacgtgaac
atcggcagtgaatttccacctgctcgcctctccaatgggaagcttcccaaaggcagtgat
gctggggaggcaccccttccgtctgccccccatgcacggaaagctggccatgaccggaaa
gacagcaggtctcccccactcctggaaaagcagaccccgaccaaagatgtcactgacaaa
ccgctggacttgtcagcgaaagtggttgatgtggaaacggctggcaagtcggaccacagt
aagaagattatgccaacggtgctggtgcatggaagggcaggaggggggacgcacttgcca
ggcagtgacattgttcagaaagaaaccatttctccagggaacagctgccccatctacagg
cctgaaattatcagcacggcaccatcctcctggatcgttcctggtcccagccccagtgag
gaggctgggaagaatgtccagctgaaaaacaaggcactggactgggttatgccacagcca
cggagttcctcgtgccccaggatgggtggcacggaggcagtggtcagcagtgtttcgggg
acagtgtcagcgggggggcggccagcatcagcgtcaccagctcccaatgccaacgtggat
tgcgccaagacggcgcggagctctgcagagagcaccgcctcagtcatacagcacgtcggg
cagcccgtcaccgctcctgcgaaacatagcagtaaggtggccaaatcctgtggtcaggaa
gccaacttcaaggcgaccgagactgccctggcctctagccccatcttcctgccgcccaac
gaggcgtttcgctccccgcctctgccctaccctaggagctacctcccatatccagtgccg
gaggggattgccatcagccctctcaccctgcacgggaaaggacatgtctaccctcaccct
gtcttgctgcccaacggcagcctctaccccacccacctggctcccaaacctggcctccct
tacagcctgccagctgggaggggggagttcatgacctaccaggatgcgctgggagtgggg
atggtgcaccccatgctgttgcagcattcggctttggagatcaataaggaggagaagaca
gagcggaggtcacggtctcacgagagggtccgctacgaggacccggctctgcggggccga
ttgccagagctcctggagagtggtgggaagatgcatttcgaaatgcccggtgacaagagt
gtgaaattgcaccagagctctggccacagtaaaaactctgcaaaaagtgacaaacacctc
ttcccggatcttcttcgagatgagcaagaggctaagagtgaagcaaatgtaacaaaagcc
agctttgctacagaaagcagtaatcagactaatgaccctacaaagcacaaggtagagcag
gcgtctcagcacagagattttattgtaatgagagaggagtttggaagaaataatgatgtt
cacgaaacctataatttcaagcaagcccagggttcatcagtgttcagcttaaggaaagaa
gatttatctgtgagccagcctaaagagagagtggcggtccagccttctcctgttttcttg
gaaagcacgcacgagagcgatgctccagctctggcttttggcaaggtgcaggaggacgcg
aagccattctgcatggggactgctccgccaagcattgatgccaaccagacctataccaaa
gacggagctgacgacgcggagtctgctgatggcaaaatactgaaacccaagccatctaaa
ctggccaagaggattgcaaactctgccggttatgtaggtgaccgattcaagtgtgtgacg
actgaactctacgccgactccagccagctcagccgggagcagcgggcgttgcagatggaa
ggattacaagaggacagtattttatgtctacctgctgcttactgtgagcgtgcaatgatg
cgcttctcagagttggagatgaaagagagagaaggccaaacagctaccaaagactcagag
gtctgcagattcagccaggcagactgggaaaacttgaaaggaaacagtgaaaagaagcca
aagtctgttgctctggaagatgccattgctgaccaaaatgacaatgacagatgtaacttt
actagtacagaaaacaaccgaggtcactttcttgaaactccagaggaaaaagatctctca
aatgagaaatgctatttagagagacattctgtatatgaaaaggcggaagaccagccaaca
gaagattttggccaacattcatgtccacgtctggacaggaaacgtaaacactctggtgag
agagtgcaaaatgatggcagccaaaatgaaagctttgtggatgaactgcaggacgaagtt
gtatcaaaagcaaaaaagaagaagacctccaaagatgactggcctgagagggaaatgaca
aacaattcctctaaccacttagaagagcccaattgtaatgaggtgaccaacctgaaggtg
tgcattgaattaacagggctccatcccaaaaagcagcgtcacctgcagcatcttagggaa
ctatgggagcagcaggtgtcaccagagagatccccgtccggcaagttgggccggcaaagc
aggaaagatttagctgaggctgttcagccagaggccactgcaaaggtcaaagacttcaca
gaagaaaggcacaccaagaaaaggtcagaggccaaaagcaatagaagttggtctgaagag
tccctcaaaacaagtgacaatgaacaaggcttgcccgtgttcccggtgtctccgcacatg
aagagcctttcatccaccaatgcaaacagcaaaaggcaggctcagccaagctgtactcca
gcctcgaggttggctgccaaacagcagaaaattaaagaaagccggaagacagatgggctg
tacacagacgaagaggaggatttccagcatgcatctctgctgccgaaatacagcgagtgt
gagaagccatcagggaaacgtcagtgtaaaacaaaacacttggcactgcaggagaggaga
aggaggtcatctctgacaggggatgacaccacagatatcgaaaatgctgaagataaggta
acggtaacgaggaaagtcaggaaacgaccggagccgagttcagactgcgactcctcacca
gccaagccgtacgagccgaagccctacgagcgcctgcagcagacgccgtcgctgctcccc
gtgccacagcccaccctgcccatggccagccccccccaggagaccaccccgagccggccc
atgccgcccgaggcacggcgcctgatcgtcaacaagaacgcgggggagacgctgctgcag
cgggctgcacgcctgggctatgaggaagtggttctgtattgtttggaaaacaaggcatgt
gatgtgaatcatcgtgacaacgcaggttactgtgccctgcacgaagcctgtgccaggggc
tggctgagcatcgtgcggcatctcctcgagtacggcgcggacgtcaactgcagtgcccag
gatggaaccagaccaatccacgacgcggtcgaaaacgaccacttggaaattgtccgcctg
ttactgtcctatggtgctgatccaacacttgcaacctactctgggaggaccatcgtgaaa
atgacccacagtgaactcatggagaccttcctcacagagtatttaactgacctgcaaggt
cgaagtgttgatgaccctggtttgtactgggatttctatggcagctctgtgtgcgatcca
aaagatgaatctggatttgatgtcttggcaaatcctcccggcccaggtgatgaagatgaa
gatggcttcagcgatgtgtttgaatttgaattttcagatgagcctcccttaccgtgttac
aacattcaagtgtgtctctctcagggaccacggaactggcttctgctctcggacgtggtg
aagagactaaaaatgtcatctcgcatcttccgctgcaacttccccaacctggaagtcgtc
accatcacggaggcagagttttacaaacagacttccctcagccagttgttctcttgtgct
acggaacttgaagcttttaacccagagagcaaagagctcttggacttggttgagttcaca
agtgagctcaagactctgctcggctccgagcttcactggttgcatccgcacgaggaccct
cccttcgacatcctctggtga
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integrated database retrieval system
