Cinclus cinclus (white-throated dipper): 134041392
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Entry
134041392 CDS
T10813
Symbol
USP9X
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform X1
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
ccic Cinclus cinclus (white-throated dipper)
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ccic01002
]
134041392 (USP9X)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccic04121
]
134041392 (USP9X)
Enzymes [BR:
ccic01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
134041392 (USP9X)
Peptidases and inhibitors [BR:
ccic01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
134041392 (USP9X)
Ubiquitin system [BR:
ccic04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
134041392 (USP9X)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
DUF3517
UCH
UCH_UBL1
UCH_1
FAST_1
Vps23_core
Motif
Other DBs
NCBI-GeneID:
134041392
NCBI-ProteinID:
XP_062344103
LinkDB
All DBs
Position
2:110301379..110396072
Genome browser
AA seq
2552 aa
AA seq
DB search
MTATTRGSPVGGNDSQGQAPDGQSQPPLQQNQTSSPDSSNENSPATPPDEQGQADAPPQL
EDEEPAFPHTDLAKLDDMINRPRWVVPVLPKGELEVLLEAAIDLSKKGFDVKSEACQRFF
RDGLTISFTKILTDEAVSGWKFEIHRCIINNTHRLVELCVAKLSQDWFPLLELLAMALNP
HCKFHLYNGTRPSETVPAGVQLAEDELYARPPDPRSPKGWLVDLINKFGTLNGFQILHDR
FMSGSALNVQIIAALIKPFGQCFEFLTLHTVKKYFLPIIEMVPQFLENLTDDELKKEAKN
EAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRLKMILRLLQISSFNGKMNALNEVNK
VISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNILSIVLRDSLHQPQYVEKLEKILRFV
IKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDCFKASWTNAS
KKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAHSDDVPVDIMDQALSAHIKILDYSC
SQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREICSLFGEAPQNLSQTQRSPHVFYRH
DLINQLQHNHALVTLVAENLSAYMESMRQYAKEHGEYDPQTVRPGSRYSHVQEVQERLNF
LRFLLKDGQLWLCAPQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFF
ENNVLQLDPSLLTENGMKCFERFFKAVNCREGKLVAKRRAYMMDDLELIGLDYLWRVVIQ
GNDDIANRAIDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTLCVLDGDKDSI
NCARQEAIRMVRVLTVLREYINECDSDYHEERTILPMSRAFRGKHITLVVRFPNQGRQVE
DLDIWSHTNDTIGQVRRCILNRIKANSAHTKVELFIGGELVDPADDRKLIGQLNLKDKTL
ITAKLTQINSNMPSSPDSSSDSSTGSPGNHGNHYSDGPNPEVESCLPGVIMSLHPRYISF
LWQVADLGSSLNMPPLRDGARVLMKLMPPDNTTVEKLRAICLDHAKLGESSLSPSLDSLF
FGPSASQVLYLTEVVYALLMPASAPLGEDASDFQYNFLKSGGLPLVLSMLTRNNFLPNAD
METRRGAYLNALKIAKLLLTAIGYGHVRAVAEACQPVVEGTSTISPINQATHDQAVVLQN
ALQNIPNPTSECMLRNVAIRLAQQISDEASKFIPDICVIRAVQKIVWASGCGSVQLVFSS
NEEISKIYEKTNAGNEPDMEDEQVCCEALEVMTLCFALIPTALDALSKEKAWQTFIIDLL
LHCHSKTVRQMAQEQFFLMATRCCMGQRPLLFFITLLFTVLGSTARERAKHSGDYFTLLR
HLLNYAYNSNINVPNAEVLLNNEIDWLKRIRDEVKRTGETGVEETILEGHLGVTKELLAF
QTPEKKYHIGCEKGGANLIKELIDDFIFPASNVYLQYMRNGELPAEQAIPVCSSPATINA
GFELLVALAVGCVRNLKQIVDTLTEMYYIGTAITTCEALTEWEYLPPVGPRPPKGFVGLK
NAGATCYMNSVIQQLYMIPAIRNGILAIEGTGSDVDDDMSGDEKQDNESNVDPRDDVFGY
PHQYEDKPALSKTEDRKEYNIGVLRHLQVIFGHLAASRLQYYVPRGFWKQFRLWGEPVNL
REQHDALEFFNSLVDSLDEALKALGHPAMLSKVLGGSFADQKICQGCPHRYECEESFTTL
NVDIRNHQNLLDSLEQYVKGDLLEGANAYHCEKCNKKVDTVKRLLIKKLPPVLAIQLKRF
DYDWERECAIKFNDYFEFPRELDMEPYTVAGVAKLEGDDVNPENQIIQNEQSENEHSGST
KYRLVGVLVHSGQASGGHYYSYIIQRNGGDGEKNRWYKFDDGDVTECKMDDDEEMKNQCF
GGEYMGEVFDHMMKRMSYRRQKRWWNAYILFYERMDTIDKDNELIKYISEIAITTKPHQI
KMPSAIERSVRKQNVQFMHNRMQYSLEYFQFIKKLLTCNSVYLNPPPGQDHLLPEAEEIT
MISIQLAARFLFTTGFHTKKIVRGPASDWYDALCILLRHSKNVRFWFAHNVLFNVSNRFS
EYLLECPSAEVRGAFAKLIVFIAHFSLQDGPCQSPFASPGPSSQAYDNLSLSDHLLRAVL
NLLRREVSEHGRHLQQYFNLFVMYANLGVAEKTQLLKLNVPATFMLVALDEGPGPPIKYQ
YAELGKLYTVVSQLIRCCNVSSRMQSSINGNPPLANPYGDPNLSQPIMALQQNVADILFV
RTSYVKKIIEDCSNSEETIKLLRFCCWENPQFSSTVLSELLWQVAYSYTYELRPYLDLLL
QILLIEDSWQTHRIHNALKGIPDDRDGLFDTIQRSKNHYQKRAYQCIKCMVALFGNCPVA
YQILQSNGDLKRKWTWAVEWLGDELERRPYTGNPQYTYNNWSPPIQSNETSNGYFLERSH
SARMTLAKACELCPEEEPDDPDAPDEHESSPPEDAPLYPHSPGSQYQQNNHVHGQPYTGP
AAHHMNNPQRTGQRAQENYEGSEEVSPPQTKD
NT seq
7659 nt
NT seq
+upstream
nt +downstream
nt
atgacagccacgactcgtggctctccagtaggagggaatgatagccagggccaggctcct
gatggacagtcccagcctcccctccagcagaatcagacttcttcacctgattcttccaat
gagaactccccagctaccccgcctgatgagcagggccaagctgatgctccaccccagctt
gaagatgaggagcctgcatttccacacacagacctggcaaagttggatgacatgatcaac
aggcctcgatgggttgttcctgtattgccaaagggggaattagaagttcttctagaagct
gctattgacctaagtaaaaaaggctttgatgtcaaaagtgaagcatgccagcgatttttt
cgggatgggttaacaatatccttcacaaaaatccttacagacgaggcagtgagcggctgg
aagttcgagattcatagatgtattattaacaacactcatcgactagtggaactctgtgtg
gccaagctgtcccaagattggtttccccttcttgaacttcttgccatggccttaaatcct
cactgcaagttccatctgtacaatggtactcgtccctcagaaacagttcctgcaggagtc
cagcttgctgaagatgaactttatgcccgtcctcctgacccacgatcaccaaagggttgg
ctagtagatcttatcaacaagtttggcacattaaatggatttcagatcttgcatgatcga
ttcatgagtggatcagcattgaatgttcagatcattgcagctctcatcaagccatttgga
caatgttttgaatttttaacgttacatacagtgaagaaatacttccttccaattatagaa
atggttccacagtttttagaaaatttaacagatgatgaactgaaaaaagaagcaaagaat
gaagccaaaaatgatgctctgtcaatgataatcaaatctctaaagaacttagcttcaaga
gttccaggacaagaagaaactgtaaaaaatttagaaatatttaggttaaaaatgattctt
aggttgttacaaatttcctctttcaatggtaaaatgaatgcactaaatgaagttaacaaa
gtaatatccagtgtgtcatactacactcatcgacatggtaatcctgaagaggaagagtgg
ctcacagctgaaagaatggcagaatggatccagcagaacaacattttatcaattgtatta
agagatagtcttcatcaacctcaatatgtagaaaaacttgagaaaattctccggtttgtc
atcaaagagaaagctctcactttgcaggatcttgacaacatttgggctgcacaggcagga
aaacatgaagccattgtaaaaaatgtacatgatctcctcgcaaaattagcttgggatttc
tctcctgaacagcttgatcacctgtttgactgttttaaggcaagttggacgaatgcaagc
aagaaacagcgtgagaaactacttgagttaattcgtcgccttgcagaggatgacaaggat
ggtgtgatggcacacaaagtgctgaaccttttgtggaatttggctcacagtgatgatgtg
ccagttgacattatggaccaggctcttagtgcccatataaaaatcttagattacagctgt
tcacaggatcgagatacacaaaagatccagtggatagatcgttttatagaagaacttcgc
acaaatgacaaatgggtcattcctgcactgaaacaaattagagaaatttgcagtttgttt
ggtgaagcaccacagaacttgagtcaaactcagcgaagtcctcacgtgttttaccgacat
gacttaatcaatcaactgcagcacaatcacgccctcgttaccctggttgcagaaaacctc
tctgcctatatggaaagcatgaggcagtatgctaaagagcatggtgaatatgatcctcaa
actgtgagaccaggaagccgatacagtcatgtgcaggaagttcaggaacgacttaacttc
ttacgatttttattgaaggatggtcagctgtggctctgtgcccctcaggcgaagcaaata
tggaagtgtttagctgaaaatgcggtttatctttgtgatcgcgaagcctgttttaaatgg
tattccaaactaatgggggatgaaccagacttagaccctgacattaataaggacttcttt
gaaaataatgtgcttcagctggatccttccctattaacagaaaatggaatgaaatgtttt
gaacgtttcttcaaagctgtgaactgtcgagaaggaaagctagtagcaaagagacgagcc
tatatgatggatgatctggaattaataggattagactacctttggagggttgtgattcag
ggaaatgatgacatcgcaaacagagcaatagaccttcttaaagagatatatactaatctt
ggcccaaggttacaagtcaatcaggtagtgattcatgaagacttcattcagtcctgtttt
gatcgtctaaaagcgtcctatgatacattatgtgtgttggatggagataaagacagtatc
aactgtgcaagacaagaagcaataaggatggtgagagtgttgactgttttaagagagtat
ataaatgaatgtgacagtgattaccacgaagagagaactattctacctatgtcaagagct
ttccgtggtaaacatatcacacttgtagttcgttttccaaaccaaggccggcaggtggaa
gatttggatatttggtctcacacaaatgacacgattggccaagtgcggcgttgcatcctc
aatcgcattaaagccaacagtgcacacacaaaagtagagctgttcattgggggtgagctg
gtggatcctgcagatgacagaaaattaattgggcagctgaatctcaaagataaaacgcta
attacagctaagcttacacagataaattctaatatgccctcaagtccagatagttcttct
gactcttcaactggttctcctggcaaccacggcaatcactacagtgatggtccaaatcca
gaagttgaaagttgtttgcctggagtgatcatgtcactgcatcctcgatacatctctttt
ctttggcaagttgcagacttgggcagtagtctaaatatgccacctcttagagatggagct
cgtgttcttatgaagctcatgccaccagataacactacagtcgagaaactaagagcaatt
tgtttagatcatgcaaagcttggggaaagcagccttagtccatcccttgattctctattc
tttggtccttctgcctcacaagtgctgtacctaacagaggtagtttatgccttgttaatg
cctgctagtgcacctctgggagaagatgccagtgacttccaatacaacttcctgaaaagt
ggtggtttgcctcttgtgctgagcatgctgaccagaaataacttcctgccaaatgcagat
atggaaactcgaaggggtgcctacctgaatgctctaaaaatagccaaattattgctaaca
gcaattggatatggccatgttcgagctgtggcagaagcttgtcagccagttgtggaaggc
acaagtacaatttcaccgataaaccaggctacgcatgaccaggcagtggtgctacaaaat
gccctacaaaacattcctaatccaacttcagagtgcatgctgagaaatgtagcaatacgt
cttgcacagcaaatatctgatgaggcttcaaaattcatccctgacatctgtgttatcagg
gcagtacaaaaaattgtttgggcatcaggttgtgggtcagttcagctggttttcagctcg
aatgaggaaattagcaaaatctatgaaaagacaaatgcaggaaatgagccagacatggaa
gatgaacaagtttgctgtgaagcactggaggtgatgaccctgtgctttgctttgattcca
acagcactggatgcactcagtaaagagaaggcatggcagacatttattattgatttacta
ttgcactgtcacagcaaaactgttcgtcagatggcacaggagcaattctttttaatggct
accaggtgttgcatgggacagagacctctccttttcttcattaccctgctgtttactgtt
ctagggagcactgcaagagagagagctaagcattctggagattacttcaccctcttaaga
catcttcttaactatgcttacaacagtaatattaatgttcccaatgctgaagttcttctc
aataatgaaattgactggcttaagagaatcagggatgaagtaaaaagaacaggagaaaca
ggtgttgaagaaacaatcttagagggtcaccttggagtaacaaaagagttgttagcgttc
cagacacctgagaagaaataccatattggttgtgaaaaaggaggtgctaatctcattaaa
gagttgatagatgatttcatctttccagcatccaatgtttatctacaatacatgagaaat
ggagaattgcctgctgagcaggccataccagtctgtagttcaccagctactattaatgct
ggctttgagctcctcgttgcactagcagttggatgtgtgcggaatctcaagcagatagta
gacacgttgactgaaatgtattacataggtacagcaatcactacttgtgaggcactcaca
gaatgggaatatctgccacctgttgggcctcgaccgccaaagggatttgtgggactgaag
aatgctggtgccacttgttacatgaattctgtcattcagcagctgtacatgattccagcc
atcaggaatgggattcttgcaattgaaggcacaggcagtgatgtagatgatgacatgtct
ggggatgaaaagcaggacaacgagagcaatgttgacccacgagatgatgtgtttggttat
ccacatcagtacgaagataaaccagcactgagcaaaactgaagataggaaagagtacaat
attggagttttgaggcatctccaagtaatttttggccatttagcagcttccaggctacag
tactatgtaccaagagggttttggaaacagtttagactctggggtgaacctgtaaatcta
cgtgaacagcacgatgctttagaattttttaattctttggtggacagtttagatgaagct
ttaaaagccttgggccatccagcaatgttaagtaaagttttaggagggtcctttgctgat
cagaagatttgtcaaggatgcccacatcggtacgagtgtgaggaatccttcacaactctg
aatgtagatataaggaatcaccaaaaccttcttgattctttggaacagtacgtcaaagga
gatttattggaaggtgcaaatgcatatcattgtgaaaaatgcaacaaaaaggtggataca
gtgaaacgcttgttgattaagaagttgcctccagttcttgcaatccagttgaaaagattt
gattatgactgggaaagggaatgtgcaatcaaattcaatgattactttgaatttccacga
gaactggacatggagccttatacagtggcaggtgtagcaaaattggaaggtgatgatgtg
aatcctgaaaatcagataatacaaaatgagcagtcggaaaatgaacactctgggagcaca
aaatacagacttgtgggtgtacttgtgcacagcggccaggccagcggcggacattactac
tcttacattatccagaggaatggtggagatggtgagaagaaccggtggtacaaatttgat
gatggagatgtgacagagtgtaaaatggatgacgatgaagagatgaaaaatcagtgtttt
gggggagagtacatgggcgaagtgtttgatcacatgatgaagcgaatgtcctacaggcgc
cagaagaggtggtggaatgcttacattcttttttatgaacgcatggacacgatagacaag
gacaacgaactaataaaatatatttcagaaattgctatcaccactaaaccccaccagatt
aaaatgccctcagccatcgagcgaagcgtgcggaagcagaatgtgcagttcatgcacaat
cggatgcagtacagcctggaatatttccagttcataaagaagttgcttacttgtaatagt
gtctacctaaaccctcctccaggacaagatcatctgttgcctgaagcagaagaaataact
atgattagtattcagcttgctgctagatttctcttcaccacaggatttcatacaaagaaa
atagtccgtggccctgctagtgattggtacgatgccctgtgcatcctgctccgtcacagc
aagaatgtacgcttttggtttgcacacaatgtccttttcaatgtttcaaaccgcttctct
gagtatctcctggaatgccccagtgcagaagtgaggggtgcatttgcaaaacttatagta
tttattgcacatttttcattgcaagatggaccatgtcaatcacctttcgcctctcctgga
ccttccagtcaggcttatgataacttaagtttaagtgatcacttactgagggcagtactg
aatcttctaagaagggaagtatccgaacacgggcgccacttgcagcagtatttcaatctg
tttgtgatgtatgccaatctaggtgtagcagagaagacacaacttctgaaactcaatgtt
cctgcaaccttcatgctggtggctctggatgaaggtccaggccctccaattaaataccag
tatgctgagctggggaagctgtacacggtggtgtcgcagctgatccgctgttgcaacgtc
tcatcgcggatgcagtcttctatcaatggtaatcccccacttgccaatccttatggtgat
cctaatttatctcaacctataatggcacttcagcagaacgtagcagatattctgtttgtg
agaactagttatgtaaagaaaattattgaagattgcagcaactctgaagagaccatcaag
ttgcttcgtttctgctgttgggagaatcctcagttctcttccacagtcctcagtgaacta
ctttggcaggttgcatattcatatacatacgagcttcgaccttatttggatctgcttctg
caaatcctgttaattgaggactcttggcaaactcacaggattcacaatgcacttaaggga
atcccagatgacagagatggactctttgacaccattcagcgctcgaagaatcattatcag
aaaagagcttaccagtgtataaagtgcatggtagctctcttcggcaactgccctgtagct
taccagatccttcagagcaatggagatttgaagagaaaatggacctgggcagtggaatgg
cttggagatgagctggagcgtagaccatacactggcaatccccaatacacctacaataat
tggtctccaccaatacagagcaatgaaacatcaaatggctacttcctagagaggtcacac
agtgctagaatgactcttgcaaaggcttgtgaactctgcccagaggaggaaccagatgat
cctgatgccccagatgaacatgagtcttctccacctgaagatgccccactgtacccccat
tcacctggttcccagtatcaacagaataaccacgtgcatggacagccatatacgggcccg
gcagcacatcatatgaacaaccctcaacgaactggccaacgagcacaagaaaactacgaa
ggcagtgaagaagtttccccgcctcagacaaaagattag
DBGET
integrated database retrieval system
