Cinclus cinclus (white-throated dipper): 134041403
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Entry
134041403 CDS
T10813
Symbol
U2AF1
Name
(RefSeq) splicing factor U2AF 35 kDa subunit isoform X1
KO
K12836
splicing factor U2AF 35 kDa subunit
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
134041403 (U2AF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccic03041
]
134041403 (U2AF1)
Spliceosome [BR:
ccic03041
]
Complex A
U2 snRNP components
U2 related factors
134041403 (U2AF1)
Complex B
134041403 (U2AF1)
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Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
RRM_1
Torus
zf_CCCH_4
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
134041403
NCBI-ProteinID:
XP_062344136
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Position
2:112774475..112788345
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AA seq
278 aa
AA seq
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MRYSFRVLIRHEIPVQFLFSVKKSKRNLPEGAEVGGTIGNSVVRYFFLFQVRVQKRQVNC
SFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQSADGLRCAVSDVEMQEHY
DEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNRWFNGQ
PIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELYGRRRKKHRSRSR
SRERRSRSRDRGRGGGGGGGGRERDRRRSRDRERSGRF
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgcgttacagtttcagagtgttaatcaggcatgaaattcctgtgcagttcttgttttct
gttaaaaaaagcaaacggaaccttccagaaggtgctgaagttggaggcactattggaaat
tctgtagttaggtatttctttttgtttcaggttagagttcagaaaagacaagtcaactgc
tcattttatttcaaaattggagcctgtcgccatggagacagatgttctcggttgcacaac
aaaccaacatttagccagaccattgccctcttgaacatttaccgtaaccctcaaaactct
tcccagtctgctgacggtttgcgctgtgctgtgagcgatgttgagatgcaggaacattat
gatgaattctttgaggaggtcttcacagaaatggaggagaaatacggcgaagttgaggag
atgaacgtttgtgataaccttggagatcatctagttggaaatgtatacgtaaagttccgc
cgtgaagaagatgccgagaaggccgtgatcgacctgaacaaccgctggtttaatgggcag
cccatccatgccgagctctcccctgtgactgacttcagagaggcctgctgccgtcaatat
gagatgggggagtgtacacgaggaggtttctgcaactttatgcatttgaagcccatttct
cgagagctaaggcgcgagttgtatgggcggcggcgtaaaaagcatagatccaggtcgagg
tcccgtgaacgccggtctagatccagagaccgcggtcgtggaggtggaggaggaggagga
ggccgtgagcgtgacaggaggcggtcaagagatcgcgaacgatccggtcgattctga
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