Cinclus cinclus (white-throated dipper): 134041609
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Entry
134041609 CDS
T10813
Symbol
GEN1
Name
(RefSeq) flap endonuclease GEN homolog 1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
ccic Cinclus cinclus (white-throated dipper)
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccic03400
]
134041609 (GEN1)
DNA repair and recombination proteins [BR:
ccic03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
134041609 (GEN1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_I
Chromo_2
XPG_N
Chromo_SEND1
Motif
Other DBs
NCBI-GeneID:
134041609
NCBI-ProteinID:
XP_062344444
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Position
3:complement(11009074..11024802)
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AA seq
936 aa
AA seq
DB search
MGVTYLWQILEPVRQPVSMSSLKGKTLAVDLSLWVCEAQTVRKMVGVVTKPHLRNLFFRF
SFFTSMGIKLVFVMEGEAPRLKADTMSKRNEMRYGPSKKAGAVRTGRSLFKAMLKECLEL
LECLGVPWVQAAGEAEAMCAYLNAKGLVDGCITNDGDVFLYGAQTVYRNFAMNAKDPHLD
CYTMSSIKEKLGCDRESLIGLAVLLGCDYLPKGVPGVGKEQALKLLETLRGQNLLQRFEQ
WKEQFQYDDNPALVVKRVIHCSECHHPGSYKEHEHNGCKFCESVRCCKPSDSKHCCPCAW
HQWERVKQANAVEDSIRKKAKSCEGFPFSEVIQEFLVNKNKLINIKECRRPNLLSFQLFA
SEKMEWTKHYACKKLLALLTHYDMIQRKSGYIDSKQLRAIRIVKTRIKNGIPCFEIEWQK
PEHYVDPEDEPVELFVVTLEEESLFQAAYPDVVALYQVEKSEVFQNKQKKKKDRPEEKVL
PNAYDEVTSLLSQMNLKPTYRILPGQHSMSDTKAPPEDQTQQRSTGSKYVALPSASCTST
VHVSASTAAPADSSVPSQCTKYSGISSSSSVPAGLQLSSTDGKGTSFSTSPACVGDDCDP
AADLTTCIKHSHPLSRETVRNSSEYSDVTQSDMHSGSEDDLFSNDAVRQLQEWSLSERIL
KKAPIPSQPLSEDVVKLESLNGFKQSKETVNPDRNHVSSSCQLNNLVQESKTVLSENSAS
ESSVHIYQDVYKKADIPAEMVKKDPYISGAACLAFSGQTTEMFHPGCELLPVSQKPTDAT
GCHIKEACIETTWKASFKKSVCQNRCSSSEDSDDGHVDKILVYEQQKRHLNPGQFKKCFT
KKMSSVVTSKRTNSDSALTIKGKKKTTNLKEDVNSFPVQVSLKPSSVEEVNCSQNSEQPI
ERLGSPTQEDKSAVLTYAWADSPLPLSERLKRRIKN
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atgggagtgacttacctgtggcaaatccttgagcctgtgagacaacctgtcagcatgagt
agtcttaaagggaaaacactggctgttgatttaagtttgtgggtttgtgaagcacagact
gttagaaagatggttggagtagttaccaagccacatctcagaaacctattttttcggttc
tctttctttacatcaatgggaattaaactagtgtttgtcatggagggagaggcccccagg
ctgaaagcagacaccatgagcaagaggaatgagatgcgatatgggccttcgaagaaagct
ggagctgtaaggacagggagatctttatttaaagccatgttaaaagagtgtcttgaactg
ctggagtgtttaggtgtcccttgggttcaagcagctggagaagcagaggcaatgtgtgca
taccttaatgcaaaaggacttgttgatggctgcattaccaatgatggagatgttttcttg
tatggagctcaaacagtttataggaactttgccatgaatgctaaggatccacatcttgac
tgttacacaatgtcctctattaaagagaaactcggttgtgacagagagtctttgattgga
ctagcagttcttctgggctgtgattatcttccaaagggggttccaggagtagggaaggaa
caagctttaaagttacttgagactctgcgaggtcaaaatttattgcaaaggtttgagcag
tggaaggaacaatttcagtatgatgataatccagctttggttgttaaaagggtaattcat
tgttcagagtgccatcatccaggatcttacaaggaacatgagcacaatggatgtaaattc
tgtgaaagcgtgagatgctgcaaacccagtgactccaaacactgctgcccttgtgcatgg
catcagtgggagcgagtgaaacaagcaaatgcagtggaggacagtatcagaaaaaaagcc
aagagttgtgagggctttccattctctgaggttattcaagagtttcttgtgaacaagaat
aaattgatcaacataaaggaatgtcgaaggccaaatttattatccttccagctgtttgct
tcagagaagatggaatggaccaaacattatgcttgtaagaagctgttagcacttttgaca
cactatgatatgatccagagaaaatctggatacattgactcaaaacaactgcgggcaata
cggattgttaagacacgtattaaaaatggaattccttgttttgaaattgaatggcaaaaa
ccagaacattatgttgatccagaagatgagcctgtggagttgtttgtagtcacactagaa
gaagagtctttgtttcaggctgcttatcctgatgttgttgccctctatcaagtggaaaag
tctgaagtttttcagaacaaacagaaaaaaaagaaagacagaccagaagaaaaggtatta
ccaaatgcttatgatgaagttaccagtcttctgtctcaaatgaatttaaagcctacatac
agaattcttcctgggcagcactccatgtcagatacaaaagctcccccagaagatcagaca
cagcagagaagtactggatcaaaatacgtagcattaccttcagcttcctgcacatcaaca
gttcatgtgtcagcatcaacagctgctcctgctgactcatctgtgccctcacagtgtact
aagtattcagggatatcatcctcttcttctgtaccagctggtttgcaactgagcagtact
gatgggaaaggaacctccttcagcacttcaccagcctgtgtaggtgatgactgtgatcca
gcagcagacttaaccacatgcataaaacactcacatccactaagtcgtgaaacagtgaga
aacagctcagaatattctgatgttacacagtctgatatgcattctggtagtgaagatgat
ttgttctcaaatgatgctgtgagacaacttcaggagtggtctttaagcgagagaatactt
aagaaggctcccattccatcacagcctttgtctgaagatgtagtgaaactggagtctttg
aatggttttaaacaatcaaaagaaacagtgaatcctgatagaaatcatgtctcttcctca
tgtcagttaaataacctagtgcaggaaagtaaaactgttctatcagaaaactctgcaagt
gaatccagtgtacatatctatcaagatgtgtacaaaaaagctgacatcccagctgaaatg
gtgaaaaaagacccttatataagtggtgcagcatgtctagccttcagtgggcaaacaaca
gagatgtttcatcctgggtgtgaattgcttccagtttctcaaaagccaacagatgcaact
ggctgtcacattaaagaagcttgtattgaaactacttggaaagcttcttttaaaaagagt
gtctgtcagaacagatgctcttctagtgaagacagtgatgatgggcatgtggataaaatc
ctggtttatgagcagcagaaaaggcacctgaaccctggccagtttaaaaaatgttttaca
aagaaaatgagcagtgttgttactagcaaaaggacaaacagtgactcagcccttacaatt
aaagggaagaaaaaaacgaccaatttaaaggaagatgttaatagtttcccagtacaggta
tctctaaaaccatcctctgtagaggaagttaattgttcccaaaattcagagcaaccaatt
gaaagattgggttctcccacacaggaagacaaaagtgctgttctgacttacgcatgggca
gacagtccccttcccctgtctgaaagactgaaaagaagaatcaaaaattag
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