Cinclus cinclus (white-throated dipper): 134041898
Help
Entry
134041898 CDS
T10813
Symbol
RB1CC1
Name
(RefSeq) RB1-inducible coiled-coil protein 1 isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
134041898 (RB1CC1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ccic01009
]
134041898 (RB1CC1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccic04131
]
134041898 (RB1CC1)
03029 Mitochondrial biogenesis [BR:
ccic03029
]
134041898 (RB1CC1)
Protein phosphatases and associated proteins [BR:
ccic01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
134041898 (RB1CC1)
Membrane trafficking [BR:
ccic04131
]
Autophagy
Autophagosome formation proteins
ULK complex
134041898 (RB1CC1)
Mitochondrial biogenesis [BR:
ccic03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
134041898 (RB1CC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
Motif
Other DBs
NCBI-GeneID:
134041898
NCBI-ProteinID:
XP_062344935
LinkDB
All DBs
Position
1:complement(112440412..112505072)
Genome browser
AA seq
1598 aa
AA seq
DB search
MKLYVFLVNTGTTLTFDTELAVQNVADLKHAIQTKYKIAIQHQVLVVNGGECMAPDRRVC
SYSAGTDTNPIFLFNKEMILCERPPAIPKTTFSAENEMELKVEESLMMPAVFHTVASRTQ
LAVEMYEVAKKLCSFCEGLVHDEHLQHQGWAAIMANLEDCTYSYQKLLYKFENVYSSYLQ
SIDDIKLKLTHLGSAVSIMAKIPLLECLTRHSYRECLGRLESSPEHGGPESEETEDGKAA
ELVLYPDVSKVNSKSMLASFCKSVARSALEGTGPENVKDDKESGQNATVQDNEMSVELKD
DDQPSFNVSLLDWINVQDRPNDVESLVRKCFDSMSRLDPRIIQPFLAECRQTIAKLDNQN
MKAIKGLEDRLYALDQMIASCSRLVNEQKELAQGFLANQKRAENLKDPSVLPDLCLSHAN
QLMIMLTNHRKLLDIKQKCTTAKQELANNLQVRLKWCCFVMLHADQDGEKLQALLRLVTE
LLERVKVVEALSTVPQMYCLAVVEVVRRKMFIKHYREWAGALIKDGKHLYEAEKAKRESF
GKLFRKSFLRNRLFRGLDSWPPSFCTRKPRRFDSELPDISLSDLQFLQSFCPSEVQPLLR
VPILCDFEPLHQHVRALHNLVKAAQSLDEMSQTITDLLNEQKASNSQASPQSATTPRMES
ATGTAIATSSRTPPSLSLQGPLCPPVCPPAPLEELSPDSIDAHTFDFETIAHPNLEQALK
QGSLDLDSLAESPESDFMSAVNEFVIEENPVSPNVISDPQSPEMMVESLYSSVINAIDSR
RMQDTSSCVKDVSVENASLNVCVEKCRVIAQDSKVHLRGIKEDLCHFRTLVQREQCDFSN
SLKCTSLEIVNTIEKVKLSLEKTLNDKHQNELQSLKSEYETKISKLLEDGEENKKKIKKL
KGDLLGLEEVLQNKNDEFAIVKNEKEAVVCLQNEKDQKLLELECQMETQNSEIKELRQSR
EIVLEDLKKLHVENNEKLQLLRAELESLEQSHLKELESNLQARHLKEFEKVLAEHKDSLD
KLNKENQHRLEQMQESHEVVMQEKQQQVEELQLRVSDLSELRCKLEVELALKEAETDEMK
LLLEESRNQQQETLRSQIDKETESLRKEIDKLNNKIQISSDEYQVGLSELRTLMTIEKDQ
CISELVNRYEEESNLLRTELNEVNLLHQKTAEAEKRLSEQVTELQNKLELETSALEKEKT
EKLSLCEQQEKYEAIIHKLKEEKELLVSNHEQDRQLLIQKLNCEKEDAVQTACKELELQR
EAAEKGLLEKILQLEMQVNQSPPAESSAESNLVAELQEKLQEEKMKFLEQLEEQEKRKNE
EMQNIRTSLTAEQQTNFNTVLAREKMKKENIINDLSDKLKVLTQQQEKDKDLIETLSEDR
ARLLEEKKKLEEEVNKLRSSNFSQSTYLAAVSEACGACAADVPTDTDRLVADLGAEGRMD
STMETSMMAVHENVHMSEEKQRIMLLERTLQLKEEENKRLNQRLMSQSMSSVSSRHSEKI
AIRDFQVGDLVLIILDERHDNYVLFTVSPTLYFLHSESLAALDLKPGECASGASRRPWVL
GKVMEKEYCQAKKAQNRFKVPLGTKFYRVKAVPWNKKV
NT seq
4797 nt
NT seq
+upstream
nt +downstream
nt
atgaagctatatgtatttttggtcaacactggaactacccttacatttgatactgaactt
gctgtacaaaatgtggcagatctgaaacatgcaattcaaaccaagtacaagatagccatt
cagcaccaagtactggttgtcaatggtggagagtgtatggcaccagacagaagagtgtgt
agttacagtgctggaacagacaccaacccaatttttttattcaacaaagaaatgatcttg
tgtgaacgtccaccagctatccccaaaaccacattttcagcagagaatgagatggaattg
aaagtagaagaatctcttatgatgcctgcagtgtttcatacagtagcatcacgaacacag
cttgctgtggagatgtatgaggttgccaagaagctttgctccttttgtgaaggtcttgta
catgatgaacatctacagcaccaaggctgggctgccataatggccaacttggaagattgt
acatactcttaccaaaagttgctttacaagtttgaaaatgtgtattcaagctatttgcag
tccatagatgatatcaagttgaaacttacacacttgggttctgctgtttctatcatggcc
aagataccactgctggagtgcctaacaagacatagttacagagagtgtttaggaagactg
gagtcttcacctgaacatggaggaccagaaagtgaagaaactgaggatgggaaagctgct
gaattggtgctttatcctgatgtatctaaagtgaacagtaaatcaatgttagcatcattt
tgcaagtcagttgcacgttcagctttggaaggcacaggtcctgaaaatgtaaaagacgat
aaggaatctggtcaaaatgctactgttcaagacaatgaaatgtcagtagaattgaaagat
gatgatcagccttccttcaatgtgtctttattagactggataaatgttcaagatagacct
aatgatgttgaatccctggtcagaaaatgttttgattccatgagcaggcttgatccaagg
atcatccaaccctttctggcagaatgtcgccaaactatcgccaaactagataatcagaac
atgaaggctattaaaggtcttgaggatagactctatgcattggatcagatgatagcaagc
tgcagcagactggtgaatgaacaaaaagaacttgctcagggatttttggctaatcagaag
agagctgagaacttgaaagatccttctgtgctgcctgatttgtgtttgagtcatgcaaat
cagctgatgattatgttaactaatcacagaaaactgttggatattaaacagaaatgtacc
actgccaaacaggagcttgcaaataatctgcaagtcagactgaaatggtgttgttttgta
atgcttcatgctgaccaagatggagagaaactacaagcactgcttcgtcttgtaacagag
ctcctagaaagggtcaaagttgtagaggctctcagcactgttcctcagatgtactgttta
gctgttgttgaggttgtgaggagaaaaatgttcataaaacactacagggagtgggcaggt
gctttaataaaagatggaaaacatctatatgaagctgaaaaggcaaaaagggaatctttt
ggtaaactctttaggaagtcttttctaaggaatcgtttgtttagaggacttgactcctgg
cctccatccttttgtacacgaaaacctcgcagatttgacagtgagcttccagatatctca
ttgagtgacttgcagtttttgcagtctttctgcccttcagaagtacagccattactcagg
gttcccatactttgtgactttgaacctcttcaccagcatgtacgtgctctacataaccta
gtcaaggcagcacagagtttggatgaaatgtcacaaaccattacagacctgctgaatgaa
caaaaggcctccaatagccaagcatcgccacaatctgctaccacaccaaggatggaaagt
gctacaggaactgcaattgctacctcttcaagaactcctccatcactcagtcttcagggt
cccctgtgtcctcctgtgtgtcccccagctccattagaagaattgtctccagacagcatt
gatgctcacacatttgattttgaaactattgcccatccgaatttagagcaagctcttaag
caaggatcattagacttggattcattagcagagagtccagaatctgactttatgtcagcg
gtgaatgaatttgtaatagaagaaaatccagtgtctcctaatgtaataagtgacccacaa
agcccggaaatgatggtggaatctctttattcttcagttatcaatgcaatagacagtaga
cgtatgcaagatacaagttcttgtgtaaaggatgtttcagtagaaaatgcttctctcaat
gtttgtgtggagaagtgtagggttattgctcaagactcaaaggtacatttaagaggtata
aaagaagatctttgtcatttcagaacacttgtacaaagagaacagtgtgacttttctaat
tctttaaaatgtacttccttagaaatagtaaatacgattgaaaaggtaaaactttcactt
gaaaaaacactaaatgataaacatcaaaatgaattgcagtctttaaaaagtgagtatgaa
actaaaattagtaaattattggaggatggtgaagagaataaaaagaaaatcaaaaagtta
aaaggggatctgttaggccttgaggaagttcttcagaataagaatgatgaatttgcaata
gtaaagaatgagaaagaagctgtagtttgccttcagaatgaaaaggaccagaaattactt
gaattggaatgccaaatggagacacagaattctgaaatcaaggaactgaggcagtcacgt
gaaatagtacttgaagacttgaaaaaacttcatgttgaaaacaacgagaaactacaactc
ctgagggcagaacttgagagtttagagcaaagccatttaaaagaactggaaagcaaccta
caagccaggcatttaaaggaatttgagaaggtcctggctgagcacaaggacagtttggat
aaattaaataaagagaaccagcatagacttgaacaaatgcaggaatctcatgaagtagtt
atgcaagagaaacaacaacaagtagaagagttgcaactcagagtttcagatctgtctgaa
ttgaggtgcaaactagaagttgaacttgccctgaaagaggcagaaactgatgaaatgaag
ctccttttggaagaaagcagaaaccagcaacaagagactttaagatctcaaattgacaag
gaaactgaaagcttaagaaaggagatagataaattaaacaataaaatacaaatcagcagt
gatgaatatcaagtgggcttatcagaactaaggactctgatgacaattgagaaagatcag
tgtatttctgagctagtaaatagatatgaagaagaatcaaatttgcttagaactgaatta
aatgaagtaaatcttcttcatcaaaaaactgctgaggcagaaaaaagactttcagagcaa
gtaacagaactgcaaaataagttagagttggaaacaagtgccctagagaaggaaaaaaca
gaaaaattatctctctgtgagcagcaggaaaaatatgaagctattatccataagctaaag
gaagagaaagaactgttagtatctaaccacgaacaagacaggcagttgctcattcagaag
ctcaattgtgaaaaagaggatgcagtacaaactgcttgtaaagagttggaactgcagagg
gaagctgctgaaaaagggcttttggaaaaaatactacaacttgagatgcaagtgaatcag
agtcctcctgctgaatcatctgctgaatccaacttagtcgctgaacttcaggagaagctt
caggaagaaaaaatgaagttcttagagcaacttgaagaacaagagaaaagaaagaatgaa
gaaatgcagaacatcagaacatcactcactgctgagcagcagaccaactttaacactgtt
ctggcaagagagaaaatgaaaaaagaaaacataattaatgatctaagtgacaaattaaaa
gtgcttacacaacagcaagaaaaagataaggatttgattgaaacactttctgaagatcga
gctcgcttacttgaagagaagaagaagcttgaagaagaagttaataaactgagaagtagt
aatttttctcaatcaacctacttggcagcagtgtcagaagcttgtggagcttgtgcagct
gatgtgcccactgacacagacagattggttgctgacttgggggctgaagggagaatggac
tccacgatggaaaccagtatgatggctgtgcatgaaaatgttcatatgtctgaagaaaag
cagaggataatgttgttagaaaggactttgcagttgaaagaagaggaaaataagagatta
aatcaaagactgatgtcccaaagcatgtcgtcagtatcctcgagacactctgaaaaaata
gcaattagagattttcaggttggtgatttggttctcattatcttggatgaaaggcatgac
aactacgtgttgtttactgttagtccaaccttgtatttcttgcactctgagtcccttgct
gcattggatctcaaaccaggtgagtgtgcatcaggtgcatcaaggagaccctgggtgcta
ggaaaagtgatggaaaaggaatattgccaggcaaaaaaggcacaaaacagattcaaagtt
cctttgggtacaaaattctacagagtgaaagcagtaccatggaacaagaaagtataa
DBGET
integrated database retrieval system
