Cinclus cinclus (white-throated dipper): 134041940
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Entry
134041940 CDS
T10813
Symbol
NID1
Name
(RefSeq) nidogen-1
KO
K06826
nidogen (entactin)
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
134041940 (NID1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ccic04990
]
134041940 (NID1)
Domain-containing proteins not elsewhere classified [BR:
ccic04990
]
EGF-like domain-containing proteins
cEGF domain-containing proteins
134041940 (NID1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
G2F
NIDO
Ldl_recept_b
EGF_3
cEGF
Thyroglobulin_1
EGF_CA
FXa_inhibition
EGF
SGL
EGF_MSP1_1
Vgb_lyase
Plasmod_Pvs28
EGF_LRP2
hEGF
Motif
Other DBs
NCBI-GeneID:
134041940
NCBI-ProteinID:
XP_062344991
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All DBs
Position
3:68518225..68559085
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AA seq
1255 aa
AA seq
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MRAPPSCLRWALLALALPALALPAERLALLPHGEDRGDAELEPGDDVHSAALELNTALRF
YGAAVHSLYVTTNGIIAVNEPSSEEKYLGQFPVSFGAIAPFMADLDTTGGRGNVYYREDS
SSDVLQLASDYIKRGFPETAFDPSSVVIVTWKLVAPFQAPGEDHALEEKRNTFQAVLASS
DSSSYAIFLYPEDSLQFYSTYSKNGDENISAMIGFSQASTNYYFWEKPGSYNVIANDEDS
IRNLYKSSNAGKQGVWVFEIGSSSDSIVPAKISNILESIEPIEDDQEITSKPFMSDYGST
EITQQYITSSTDSTEEDQHLVTYSVPQLGTEDFLTSYQDVTGTPSTEAFYSPQNFPTAKA
PPRQFRIQQFPPQPPQVIDVEEFDETGIVFRYHTDVQQTCANNRHQCSVHAICKDYPNGF
CCSCIAGYKGNGRQCVAEGSPQRVNGKVRGRIFVGNNPVPVVFENTDLHSYVVMNQGRAY
TAISTIPETLGYSLLPLASVGGIIGWMFAVEQQGYKNGFSITGGEFTRQTEVTFLSNNEK
LVVKQKFSGIDEHGHLTISTEMEGRIPEIPSGSSVHIEPYTELYHTSSSVITSSSSREYT
VTEPERDGVASTYTGAYQWRQTISFDECIHDDSPHSAPATQQLSVDSVFVLYNRDEQILR
YAMSNSIGPISDGSADINRNPCYTGTHNCDTNAVCRPGTGNRFFCECSIGFRGDGNVCYD
IDECSEQPGLCGSNAECNNQPGTYRCECAEGYQFAADGRTCVAVEYVVNHCQRGTHNCDI
PQRAQCVYTGGSAYICTCLPGFSGDGRACEDVDECQQGHCHPAAFCYNTPGSFSCHCKAG
YRGDGFRCVLGEVEKTKCQREREVALGSGGAFFPRDARVGHFIPQCDEHGHYLPTQCHAG
SGYCWCVDRDGNEIDGTRSGPGVRPPCLSTAAPPVVIGPSVRPDTVPLPPGTHLLFAQSG
KIEHVPLEGNNMKKSSAKALLHIPDKVVIGVAYDCVDKMVYWTDISGPSISRASLHGGEP
MTIIKTDLGSPEGIAVDHLGRNIFWTDSQLDRIEVARLDGRQRRILFDTGLVNPRAIVLD
PVRGNLYWTDWNREAPKIETSYMDGTNRRILVKDDLGLPNGLTFDPYSSMLCWVDAGTKR
LECMNPNQLGRRKIVEGIQYPFGVTSYGKNLYYTDWRRDAVVAVDRTISLENDNFQPHKR
SRLYGITTAFAQCPGGHNYCTVNNGGCTHLCLATPGGRTCRCPDNTVGVDCIERN
NT seq
3768 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgccccgccgagctgtctgcgctgggcgctgctggccctggcgctgcccgccctg
gcgctgcccgcagagcggctggcgctgctgccgcacggcgaggaccgcggcgatgccgag
ctggagcccggggacgatgtgcactcggcggcgctggagctgaacacggcgctgcgcttc
tacggcgcggccgtccactccctctatgttactactaatgggattattgcagtgaatgaa
ccctcaagtgaagaaaaataccttggtcaattcccagtgagttttggggctattgctcct
tttatggcagacctggacacaacaggtggacgtggaaatgtgtattacagggaagattca
tcctcagatgtcttgcaacttgcatcagattatatcaaaagaggttttcctgagactgcc
tttgatcccagcagtgttgttattgttacctggaagcttgtggctcctttccaggcacca
ggagaagatcatgctttggaagaaaagagaaacacattccaggctgtcttagcctcttct
gattccagttcctatgctattttcctttatccagaagatagtttgcagttctatagcaca
tactccaagaatggtgatgaaaatatttctgctatgattggctttagccaagcctctaca
aactactacttttgggaaaagccaggatcctacaatgtcattgctaatgatgaagacagc
attagaaacctgtacaaaagcagcaatgctgggaagcagggcgtttgggtgttcgagatt
ggtagctcatctgacagtattgtgcctgccaaaatcagcaatattttggagagcatagag
cccatcgaagatgaccaggagataacttctaagccctttatgtctgactatggttccact
gaaataacacagcagtatatcacaagtagtacagacagcactgaagaggaccagcacctt
gtcacatacagtgttcctcagttaggtacagaagactttctgacttcataccaagatgta
acaggaacaccttcaactgaggctttttacagtcctcaaaatttcccaacagcaaaagct
ccacctcgccagtttcggatccagcagtttcccccgcaaccacctcaagtcatagatgtg
gaagaatttgatgaaactggaatagtgtttcgctaccacacagatgtccaacagacctgt
gctaacaaccgtcaccagtgctctgttcacgctatttgcaaggattatcccaacgggttt
tgttgcagttgtattgctggttacaaaggcaatggcagacagtgtgtagcagaaggttct
cctcagagagtcaacggcaaggtcagaggaagaatctttgtaggaaacaaccccgttcca
gttgtgtttgagaacactgatctccactcctatgttgtgatgaaccaagggcgtgcctac
actgctatcagcacaatccctgagactttggggtattctttgctacctcttgcctctgtt
ggaggtatcataggatggatgtttgctgtggaacagcaaggatataaaaatggattcagc
attaccggtggtgagtttacacggcaaacagaagtaacttttctcagcaacaatgagaag
ctggttgtaaagcagaagtttagtggcattgatgagcatggtcaccttaccatcagcaca
gaaatggagggcagaatacctgagatcccatctgggtcatcagtccatatagagccatac
actgaactctaccacacttctagttctgtgatcacctcatcatcctcgagggagtacaca
gtgacagagccagaaagggatggagttgcttccacgtacacaggtgcctatcagtggcgc
cagaccatctcctttgatgaatgcatccacgatgactccccacattctgctcctgccacc
cagcagctctcggtggacagtgtgtttgtcctgtacaacagagacgagcagatcctgcga
tacgccatgagcaactccatcggccccatcagcgatggttctgctgatattaaccggaat
ccttgctacactggcactcataactgtgacaccaacgccgtgtgccgtccaggaactgga
aatcgtttcttctgtgaatgttcgattggcttccgtggagatggaaatgtttgttatgat
attgatgagtgttcagagcagccagggttgtgtggcagcaatgcagagtgcaacaaccag
ccaggcacctaccgctgtgagtgtgctgagggataccagtttgcagcagatgggcggact
tgtgttgctgtggagtatgtggtaaaccactgccagaggggcacacacaactgtgacatt
ccccagcgtgctcagtgtgtgtacaccggagggtctgcctacatctgcacatgcctccct
ggcttctccggagatgggcgtgcctgtgaggatgtagacgaatgtcaacagggccactgc
catccagctgctttttgctacaacacccctgggtccttcagctgccactgcaaggcaggt
tatcgtggggatggtttccgatgtgtgttaggagaagtagaaaagaccaaatgccagcgt
gaacgtgaagtagctcttggcagtggaggtgctttcttcccaagggatgcaagagttggt
cacttcattccccagtgtgatgagcatgggcattacctacccactcagtgccatgctggc
agtgggtattgttggtgtgtggatagggatgggaatgagattgatggcaccagaagcggc
ccaggagttcgaccaccatgtctgagcacagctgctcctcctgttgttattgggccctct
gttcgaccagacacagtacctctgccaccaggaacacacttgctttttgcccaaagtggt
aaaattgaacatgttcctctagagggaaacaatatgaagaaaagcagtgcaaaagcactc
ttgcatattccagacaaagttgttattggagttgcttatgactgcgtggacaagatggtt
tattggacagacatcagtggcccttcaatcagcagggccagcctgcatggtggggagcca
atgaccataatcaaaacagatttgggaagccctgaagggatagctgtagatcacctaggt
cgcaacatcttctggactgactctcagctggatagaatagaagtggccaggctggatggg
cgccagcgtcgcatcctttttgacactggtttggtgaaccccagggcaattgtcctggat
cctgtgagaggaaacttgtactggactgactggaacagagaagctcctaaaattgaaact
tcatacatggatggcacaaacagaagaattcttgtcaaagatgatcttgggttaccaaat
ggactgacatttgatccttattcctcaatgctgtgctgggtagatgcaggtaccaagagg
ctggaatgcatgaaccctaatcagcttggtcgacgaaagattgttgaagggattcagtat
ccttttggggttacaagctatgggaagaatttatactatacagactggagaagggatgct
gttgtggcagtggatcgcacgatttctttagaaaatgacaacttccagcctcacaagcgc
tcacgactctatggaattaccacagcctttgctcagtgcccaggaggacataactactgt
acagtgaataatggtggttgtactcacctctgcttggctaccccaggaggccgtacttgc
cgctgccctgacaacacagttggagtagattgcatagaaagaaactga
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