Cinclus cinclus (white-throated dipper): 134041944
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Entry
134041944 CDS
T10813
Symbol
NUP153
Name
(RefSeq) nuclear pore complex protein Nup153 isoform X1
KO
K14296
nuclear pore complex protein Nup153
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic03013
Nucleocytoplasmic transport
ccic03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
134041944 (NUP153)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
134041944 (NUP153)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccic03019
]
134041944 (NUP153)
Messenger RNA biogenesis [BR:
ccic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
134041944 (NUP153)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup153
Zn_ribbon_RanBP
Nup_retrotrp_bd
Phage_cap_P2
Motif
Other DBs
NCBI-GeneID:
134041944
NCBI-ProteinID:
XP_062345029
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All DBs
Position
1:complement(64381773..64425194)
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AA seq
1454 aa
AA seq
DB search
MASGGSGGGGGKIRTRRHHLGVAKLPYARGKQQLGLLSRVTESVKNIVPGWLQKYFNKRE
DKCVDMNESASEEENPVNYHHDYANEDAMVIDGRVTPESARINLEEPSTSRSALNFSDVL
TRPSLHRSHLNCTVLDSAVPHCQPSTSSALGIGSPGLSLVKEIKDSTSQHDDDNISTTSG
FSSRASDKDITVSKNTSAPLLWSPEAERSHSLSQHPASSSKKPAFNLSAFGSPSPSLGNT
SVFKTRQLGDSPFYPGKTSYGGAAAAARQTKVQISSYQPPIKRQMKAKQANVQSYGVTSS
TARRILQTLEKMSSPLADAKRIPSSVSSPLSSPVDRSVLNVTSFQSRENQMDSQHPPVQK
LVTPKPISLTGSRITYFKPSLKSATNSRKIHQRVDTDHHDIMEESFHAEKPVKSSESKLS
YPKLDTPASNGLSSGGRMDSSCGKMRRERERYCASRPGQKQQQQLEMEQELPEVPLPIST
ASLPTFNFSFPASSAVSSSPSIVSKPVMNKVQPASNVGSPTFVFSSPIVKSTEVKVLPPL
SQIKFTFSVPVVKSSELSVSTDTPVTSILSPGSATVNSTSNKKEEEEEYDGFCKPAKFLK
QGSVLDILKTPGFMSGKSPSCSSAQPVTSTVVYTRPAISSFSAGKDTSKQASSFWQSDTQ
DPCLQSKTTDGKCVTCEAAKVSTVESTKLTMSVSPCISSKTTVPTTGTLGFEDKFKPAPN
TWDCDTCLVQNKPEATKCIACETPKPGTGVMPALTMPMVTDNSVTVTSTSSSTGTTATLG
FGDKFKQPKGSWNCSECLLQNKAEDSKCVACQSEKPGSSVPVTSSSVSAFSTSSGSFLDL
DKFKKPEGSWQCEVCLVQNKAEATQCVACENVKPGTKAELKGFGTTTVSTNAAMPSFTFG
VPSASSEPSQTLGSTGNFKFGEQSSFKFGIASESASSNTVTGGFKFPTGSGNFKFGVSSS
DSKSEDSKKESKSNSFTFGLPSTSIQAPSTFQFGTTSLGQQEKKEEPVLGGFGFATSSAS
SIATNDNKTGVGGFTFGTVAEKDAASPALPFKKSDEKKDDSVSTKGGFSFGSVESAPASQ
FVLGRAEEKQDSVTSTGPLAFGKKADSEELKAQPIFSSGTAEHTKEESTAKPVFNFSFGK
PSEKESEQAKAPFAFGAPTSTSDQGASFSFLSSSSSSTVVPTTSANSSSVFGSTLSSSNP
QPVPTPFVFGQPSNTVTSSVFGNPAESTTSQSFGFSQENKPATTSSSTGSTITPFLFRSG
ESSTNAANSGFTFGATTTSSSTGSSSSFLFGSGPPAPAAGPAFGASQPPAFGPSPGSGQQ
SAPSFGSLSTTLFSAGSHPAPSAFGSVTSSTQPSVFGQQAAHQPTFGSGTPSAGSVFQFG
SSTTNFSFPNNPGVFTFGANPSAAAAPAPSSGTPGFSFNQRPTFTVGTNGKNVFSASGSS
VAGRKIKTAVRRRK
NT seq
4365 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgggtggcagcggcggcggcggcggcaagatccggacccggcggcaccacctg
ggagtcgcgaagctgccctacgcgaggggcaagcagcagctggggctccttagcagagtg
accgaatcagtgaaaaacattgtaccaggatggttgcagaagtatttcaataaaagagaa
gataaatgtgtagatatgaatgaatctgcaagcgaggaagagaatccagtaaactatcac
catgattatgcaaatgaagatgccatggtaattgatggaagagtcacgcctgaatcagca
agaattaatttagaagaaccatccacaagcaggtctgcactgaacttctcggatgtgtta
acaaggccctcccttcaccggagccatttgaactgcaccgtgttggattccgcagtccca
cactgtcagccctccacatcttctgcacttggcattggcagtcctgggctgtccctcgta
aaggaaataaaagattctacctctcagcatgatgacgacaacatctcaacaaccagtggc
ttttcctctagagcgtctgataaagatatcacagtttcaaaaaatacttcagcaccactg
ctctggtccccagaggctgaaagatctcattccctctcacagcatcctgcatctagctcc
aaaaaacctgcattcaatttatctgcttttggatctccctctccttcacttggaaacact
tctgtctttaagacaagacagcttggggattctccattttatcctggaaagacctcttac
ggtggtgcagccgcagcagcgagacagacaaaagtgcagatttcttcttaccagccaccg
ataaaaagacaaatgaaagctaaacaagcaaatgtgcaatcctatggcgtgacaagttcc
acagcacggcgcatcttgcagacattggagaagatgtcaagccctttggcggatgctaag
aggattccatcttctgtttctagtccactgtcttctcctgtggaccggagtgtgctgaat
gtgactagcttccaatccagagaaaaccagatggattcgcaacatccacctgtccagaaa
cttgtgacaccaaagccaatctccctgacagggagtcggatcacatattttaaaccatct
ttgaaatcagctactaattccagaaaaattcaccaaagggtagatacagaccatcacgac
ataatggaggagagttttcatgcagaaaagcctgtaaaatcatctgaaagcaaattgagc
taccccaaactcgatactcctgcatccaatggtctgtcttcaggaggaaggatggatagt
tcctgtggcaagatgagaagggaaagggaacgatactgtgcatcaagacctggacaaaaa
caacaacaacaactggagatggagcaagaactacctgaagtacccctgcccatcagtact
gcgtcgctgccgacattcaacttcagtttccctgccagtagtgctgtctcctcatcaccc
agcattgtttcaaaaccagtgatgaacaaggtacaaccagcaagtaatgttggcagtcct
acgtttgtgttttcatctccaattgtgaaatctactgaggtgaaagtgctacctccattg
tctcagataaagtttacatttagtgttcctgttgtaaagtcatcagagctttctgtatcc
actgatacaccagtgacatccatccttagtccaggtagtgccactgtaaacagcaccagc
aataagaaggaagaggaagaagagtatgatgggttctgcaaacctgctaagttcttaaag
caaggaagtgtgttagacattctaaaaacccctggctttatgtctggaaaatcaccctcc
tgttcatctgcacagcctgttacgagcacagtggtctatacaaggcccgcaataagtagt
ttttctgcaggtaaagacacctctaaacaagcatcttcgttttggcagtctgacacacag
gacccatgtctgcagagcaaaaccacagatggcaagtgtgtaacatgtgaagctgctaaa
gtatccactgttgagagtacaaagctgaccatgagtgtgagtccgtgcatctcctccaag
acaacagtccctacaacagggacactgggctttgaagacaaatttaaaccagcacccaac
acgtgggattgtgatacctgtctggtccagaacaaacctgaagctacaaaatgtatagca
tgtgagacaccaaagcctggaacaggagtgatgcctgctttgacaatgccaatggtcacg
gacaactcagtgacagtgacgtccacctccagcagcactggcacaacagccactctgggg
tttggagacaaatttaaacagccaaagggctcttggaactgttcagagtgccttctacaa
aataaggcagaagacagcaaatgtgtagcttgtcagtctgagaaaccagggagttcagtg
cctgtgaccagtagcagtgtttctgcattttctacttcttctggaagttttctggattta
gacaaattcaagaagcctgaaggaagttggcaatgtgaagtctgcttggtccaaaacaaa
gcagaagccacacaatgcgtagcctgtgaaaatgtgaaaccaggcaccaaagcagagctc
aaaggttttggtactactactgtgtctacaaatgctgcaatgccatcatttacatttggt
gtcccgtcagcatcctctgaaccttctcaaacattaggtagcacaggaaattttaaattt
ggagaacaaagtagctttaagtttggcattgcatccgaatctgcatcgtccaacactgtg
actggaggatttaagtttcctactggttcagggaacttcaaatttggagtttcttcctca
gactctaaatcagaagacagcaaaaaagaaagtaaaagtaacagttttacctttggactt
ccatctacaagtattcaggctccttcaacatttcagtttggaacaacgagtctgggacag
caggaaaagaaagaggaaccagttttaggaggctttggttttgctacaagttctgcttct
tccatagctactaatgacaataaaactggagttggtggcttcacttttggaaccgtggca
gaaaaggatgcagcatcacctgctttgccatttaagaagtcagacgagaaaaaggatgac
agtgtttcaacgaagggaggcttctcttttggcagtgtggagtctgcacctgcctcacag
tttgttttaggaagggcagaagagaagcaggactctgtcacttccactggtccgttagca
tttggaaagaaagctgacagtgaagagttgaaggcacagcctatcttttcatctgggaca
gctgagcataccaaagaggagagcacagcaaaacctgtattcaattttagttttggtaaa
ccatcagaaaaggaaagtgagcaggcaaaggcaccttttgcatttggagcaccaaccagt
acttcagatcaaggagcatccttcagcttcttgagctccagttcctccagcacagtggta
cccaccacttcagccaacagcagcagcgtgtttggcagcaccctctcttcctcaaaccct
cagccagttcccactccctttgtgtttggacaacccagcaacactgtgaccagctctgtt
tttggcaatcctgcagaatctacaacatctcagtcatttggcttctctcaagaaaacaaa
ccagcaaccacatcttccagcactggctcaactattactccgtttctcttccgttcagga
gagagcagtaccaatgcagcaaattcaggatttacttttggagccacaactacatcaagt
tcaacagggtcatcatcttcgtttctgtttggctctgggcctccagcgcctgctgctggc
ccagcctttggcgccagtcagccaccagcatttggcccaagcccaggctctggccagcaa
agtgctccaagttttggatcactgtcaacaacgttgttttctgctggctctcaccctgct
ccttctgccttcggctcggtgacgagcagcactcagccctcagtgttcggacagcaggca
gcccatcagccaacttttggctctggtacccccagtgctggttctgtattccagtttgga
agtagtactactaatttcagctttccaaataacccaggagtattcacttttggtgcaaat
ccttctgcagcagcagctcctgcaccatcttctggcactccaggattttcgttcaaccag
cgtccaacatttactgtggggactaacggaaaaaatgttttctctgcctctggatcttca
gttgctggtcggaagataaagactgcagttagacgtagaaagtaa
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