Cinclus cinclus (white-throated dipper): 134042199
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Entry
134042199 CDS
T10813
Symbol
PARP1
Name
(RefSeq) poly [ADP-ribose] polymerase 1 isoform X1
KO
K24070
poly [ADP-ribose] polymerase 1 [EC:
2.4.2.30
]
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic03410
Base excision repair
ccic04210
Apoptosis
ccic04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
134042199 (PARP1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
134042199 (PARP1)
04217 Necroptosis
134042199 (PARP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccic03032
]
134042199 (PARP1)
03036 Chromosome and associated proteins [BR:
ccic03036
]
134042199 (PARP1)
03400 DNA repair and recombination proteins [BR:
ccic03400
]
134042199 (PARP1)
Enzymes [BR:
ccic01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.30 NAD+ ADP-ribosyltransferase
134042199 (PARP1)
DNA replication proteins [BR:
ccic03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
134042199 (PARP1)
Chromosome and associated proteins [BR:
ccic03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
134042199 (PARP1)
DNA repair and recombination proteins [BR:
ccic03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
134042199 (PARP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PARP
PARP_reg
zf-PARP
PADR1_N
WGR
Zn_ribbon_PADR1
BRCT
BRCT_2
Motif
Other DBs
NCBI-GeneID:
134042199
NCBI-ProteinID:
XP_062345318
LinkDB
All DBs
Position
3:complement(95664746..95698082)
Genome browser
AA seq
1011 aa
AA seq
DB search
MAEEAEKLYRAEYAKSGRASCKKCGESIAKDSLRLALMVQSPMFDGKVPHWHHYSCFWKR
ARIVSHTDIDGFPELRWEDQEKIKKAIETGGPGGGKGGEQEGGGKAEKSLNDFAAEYAKS
NRSTCKGCEQKIEKGQIRISKKMVHPEKPQLGMIDNWYHPDCFVSRRAELGFLPAYGATQ
LLGFSILKAEDKETLKKQLPATKSEGKRKGEEVDGNVTAKKKPKKEKEKESKQQKQLKEQ
TELIWGIKDELRKVCSTNDLKELLIANKQEVPSGENAILDRVADGMAFGALLPCEECKGQ
FVFKSDAYYCSGDITAWTKCVAKTQTPNRKDWVIPKEFREIPYLKKFKCKKQDRVFPSDA
TTANSAPPPSASAPLSETVSAPRDKPLTNMKILVVGKLSKNKEEVKSIVEDLGGKMTTTA
NKATLCISTQKDVEKMSKKMEEVKEAKVRVVSEAFLQDVKSSSKDFQELVSLHALSPWGA
EVKMEHEEMAVDGKSSKPPSAKSTGKVKEEQGPSKSEKKMKLTVKGGAAVDPDSGLEDSA
HVFEKGGKIFSATLGLVDIVKGTNSYYKLQLLEDDRENRYWVFRSWGRVGTVIGSNKLEQ
MPSKEDAIEHFLNLYEEKTGNSWHSKNFTKYPKKFYPLEIDYGQDEEAVRKLTVGAGTKS
KLAKPIQDLIKMIFDVESMKKAMVEFEIDLQKMPLGKLSKRQIQSAYSILNEVQQAVSDS
GSESQILDLSNRFYTLIPHDFGMKKPPLLNNLEYIQAKVQMLDNLLDIEVAYSLLRGGNE
DGDKDPIDINYEKLKTDIKVVDKDSEEAKIIKQYVKNTHAATHNAYDLKVVDIFRIEREG
ESQRYKPFKQLHNRQLLWHGSRTTNFAGILSQGLRIAPPEAPVTGYMFGKGIYFADMVSK
SANYCHTSQADPIGLVLLGEVALGNMYELKNASHITKLPKGKHSVKGLGKTAPDPTATTT
LGGVEVPLGNGISTGINDTCLLYNEYIVYDVAQVNLKYLLKLKFNYKTSLW
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggaggcggagaagctgtaccgggccgagtatgccaagagcggccgcgcctct
tgcaagaaatgcggcgagagcatcgccaaggactcgctgcgcctggcgctcatggtgcag
tcacccatgtttgatggcaaagtccctcactggcaccactacagctgcttctggaagcgg
gctcgaattgtgtcccacacagacattgatggcttccctgagcttcggtgggaagatcag
gagaaaatcaagaaagccattgaaactggaggccctggaggaggaaaaggaggggaacag
gaaggaggtggtaaggctgagaagagcctaaatgactttgctgcagaatatgccaagtct
aacagaagtacttgcaaaggctgtgagcagaaaatagaaaagggccagatccggatttcc
aagaaaatggtgcatcctgaaaagcctcagctgggaatgatagataactggtaccacccg
gactgctttgtgagccgccgagcagagctgggcttcctcccggcctatggggccacccag
ctcctgggcttcagcatcttgaaggctgaagataaggaaactctgaagaagcagctccca
gctaccaaaagcgaaggaaagagaaaaggagaagaggtagatggaaatgtgacagcgaaa
aagaagccgaaaaaagaaaaggagaaagaatcaaagcagcaaaaacagctgaaggagcag
acagagctgatctggggcatcaaggatgagctgaggaaggtctgctccaccaatgacctg
aaagagcttctgattgccaacaagcaggaggttccctcaggggagaatgccatcttggac
cgagtagcagatgggatggcatttggagctctgctgccctgtgaggagtgcaaggggcag
tttgtgttcaagagtgacgcttattactgttcaggggatatcactgcctggaccaagtgt
gtggctaaaacacagactcccaacaggaaagactgggtgatcccaaaggagttccgtgaa
attccttacctgaagaaatttaaatgtaagaagcaggacagggtgttcccttcagatgct
acaactgcgaactcagcacctcctccctctgcatctgctcctttgtcagagactgtgtct
gcacccagagacaaaccactgaccaacatgaagatcctggttgttgggaagctgtcaaag
aacaaagaggaagtgaaaagcattgtggaggacctgggaggaaagatgacgacaacagct
aacaaggccaccctgtgcatcagcacccagaaggatgtggagaaaatgagcaagaagatg
gaagaagtgaaggaggctaaagtccgtgtggtctcagaggcatttcttcaggacgtgaaa
tcttctagcaaggacttccaggagcttgtgtctctccatgccctttcaccttggggtgca
gaggtaaaaatggagcatgaggaaatggcagtggatgggaagagcagcaagcccccaagt
gcaaaaagcactgggaaggtcaaagaagaacaaggacctagcaagtctgaaaagaaaatg
aagttaacagtgaagggtggagcagcagtagaccccgattctggtttggaggattctgct
catgtctttgagaaaggtgggaaaattttcagtgcaactctgggactagtagatattgtg
aaaggaacaaattcctattataaactgcagctgctagaggatgacagagagaacagatac
tgggtgttccgatcctggggccgtgtgggcactgtaataggcagtaacaagctggagcag
atgccatcaaaagaagatgccattgaacacttcctgaatttgtatgaagagaagactggc
aattcttggcattcaaagaacttcactaaatatcccaaaaaattttacccgttggaaata
gattatggacaggatgaagaagctgtcaggaaactgacagtaggtgctgggacaaaatca
aaactcgctaagccaatccaagatcttattaagatgatctttgacgtggagagcatgaag
aaggcaatggtggaatttgagattgacttgcagaagatgccattgggaaaactgagcaag
cgacagatccagagtgcatactccatcctgaatgaggttcagcaggcagtttctgacagt
ggttcagaatcccagattttggacctctccaaccggttttatacactgattcctcatgac
tttggcatgaagaagccacctctcctaaataacttggaatacattcaggctaaagtgcag
atgttggacaacttgcttgatattgaggttgcttacagccttctcagaggtggaaatgaa
gatggagataaagacccaattgacatcaactatgaaaaacttaaaacagatattaaggtt
gttgacaaagattcagaagaagccaagattatcaaacaatatgtgaagaacactcacgct
gctacacacaatgcatatgacctcaaagttgtggatatcttcaggattgagcgtgagggg
gagagccagcgttacaagcccttcaagcagctccacaaccggcagctgctgtggcacggc
tcccgcaccaccaactttgccgggatcctctcgcagggtctgcggatagctccgcctgaa
gctcctgtgaccggctatatgttcgggaaggggatctattttgcagacatggtatccaag
agtgcaaactactgtcacacatctcaagctgatcccataggtttagtgctactgggagaa
gttgcccttggaaatatgtacgagctaaagaatgcttcccacatcacaaaattgcccaag
ggaaaacacagtgtcaaaggcttgggcaaaaccgcacctgatcccacagccaccaccacc
cttggtggtgtagaggttcccttagggaatgggatctccacaggaatcaatgatacctgt
cttctgtataatgaatatattgtgtatgatgttgctcaggtaaatctgaagtacctgttg
aaactgaaattcaactataagacatcactctggtga
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