Cinclus cinclus (white-throated dipper): 134042213
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Entry
134042213 CDS
T10813
Symbol
PCARE
Name
(RefSeq) photoreceptor cilium actin regulator
KO
K24165
photoreceptor cilium actin regulator
Organism
ccic Cinclus cinclus (white-throated dipper)
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ccic03037
]
134042213 (PCARE)
04812 Cytoskeleton proteins [BR:
ccic04812
]
134042213 (PCARE)
Cilium and associated proteins [BR:
ccic03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
134042213 (PCARE)
Cytoskeleton proteins [BR:
ccic04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
134042213 (PCARE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Retinal
TPR_TNPO3_IPO13_3rd
Motif
Other DBs
NCBI-GeneID:
134042213
NCBI-ProteinID:
XP_062345338
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All DBs
Position
3:97269422..97277378
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AA seq
1289 aa
AA seq
DB search
MGCTPSRSETTSTAARSGLKALNKPKSVLPIDSKDKGIPLLVKGSSCYNIDECGIQRQDC
VEEEEEDRLSELDKNDNLQLSSKACSDSQISREDKKIERIATDAEVVMSELIESQKHITE
SIEIRKQTSCESEASVFVWDDKNESNSKQIPKKGKKKKIHKLAKQGQHNKSKERSILAPC
ETEKKVDFPELLVKAHQSAYAYLHPNLSKYEAILHMANQATQTQLFLQQMISFLVLRFDE
INQLLEEIANDGESLLKDVGGNLAWPAEKDNLKEHPDLLQQLLQYTVNKMQLVSGMLASL
TSNALQETCSYLQSAASNLEGKLKAKQSFDEHLLRTVKLLEASTVGPSQSHGDDRTLCSE
DSGIGVDNESLKEFSALSQHGGQPSDSCAHEHPSRKHAGTAERVNGGTASVGTAASHGCA
LQRHFKDMFRSSVQRREATSCQGGVAEGTSTMAQYANLSKSRSYNSLQSDSTQEGEHFKI
CESTDFPSDEDEDDDDGEEESTLGEDDDNTSLSEMGKDVLPRSLSSPALITDNVQRQSIK
RTENTDTEEIILKMKDAISEKIKFVPAKSRRKEWIEDESGRAVLAKRPSTATGRQRKFGK
QRRSRSEESLRSQAEDPTLLELQRTQKELSKRLEMLCGKDIANNQELWKSRTAPYLQDEQ
ITSRSSRKLKAGLAKNFSILPNQDKVPLFTSDQNPVLPLNEKRVRNPVRATVPTQETPGG
KENGPPGAQMLSGSGCTSRQSVRKLIETFSPTGDLAKPTPLRNLGPIKCIRKFGLPVIPP
TTSFQRGLAPFNLKHRISPVEDTNTSDVSSSFPNTFLPAPPAELSKKDTKEETDEDTENL
PPPPPEMLMDTSSENLSEPEETGSIEGNSSEDAKKTTKPELHAAKRSQISPKMKASLQSI
DLLPSKNISGPSAVTNKGLRNTRSGDEKLHRYSLELNPTNVHIPSQEEILATQRKEAADL
YKQTHKIIPLRNPSEVSNPHSNSSESKGPNPPAPSVPCQKHGSPDPLRSSEKASLFTRRV
SPTRTSPSSSTEKLLFSPPAHHRHSLQAFSNAQPSSPTMQRKPSPPSSPRMPSPPLQKKL
PSPPPQRKPLSPPVGHKQSSPTAQRLAGSPAPFPTTPSPPASPSRSYKGPRAGLDAGDDH
QLSSSKRGSNVHSIFCPATSSLFEAKPPVVPSKCTAEVTSQLEAASHSPKSSLLFQQPGG
RTRKLSLSTTNPQPFVRRSFSDRRPGVQPHLPAPLTAGSEPALNQASLEKSPRKAGDSWN
SSGVPEAKESNRSASHPELYVVGQGLQRD
NT seq
3870 nt
NT seq
+upstream
nt +downstream
nt
atgggctgcacaccttctcgcagtgagactaccagtactgctgcaagaagtggtcttaag
gctttgaataaacccaaaagtgttttgccaattgattcaaaagataaaggaatacctctg
ctggttaaaggttcatcttgctacaatattgacgaatgtgggattcagaggcaggactgt
gtggaagaagaggaggaggatagactgtcagagctggacaaaaatgataatttgcagtta
tcttccaaggcttgctcagattcccagatttccagggaagataagaaaattgagaggata
gccacagatgctgaagttgttatgtctgaactgattgagtctcaaaaacacatcactgag
tccatagagatcagaaagcaaacctcctgcgaatcagaagcatcagtttttgtctgggat
gacaagaatgaaagcaactcaaagcaaatcccaaagaaaggaaagaagaaaaaaatccat
aagctggcaaagcaaggtcaacacaacaaaagtaaagaaaggtccattctggccccgtgt
gagacagagaagaaggtagacttcccagaactgctcgtcaaggctcaccagagtgcatat
gcctacttacatcccaacctctccaagtatgaagctattctgcacatggccaaccaggcc
acccaaactcagctttttctacagcagatgatcagcttccttgtgcttcgctttgatgaa
atcaaccagctcttggaagaaattgccaatgatggggagagtcttctcaaagatgtaggt
gggaatctggcatggccagcagaaaaggacaatttgaaggagcatccagatcttctgcag
cagctactgcagtacacggtcaacaaaatgcagttggtgagtgggatgctggcctccctc
acgtccaacgccctgcaggagacgtgcagctacctgcagtctgctgcaagcaacttggaa
ggcaaactgaaagcaaagcaaagctttgatgagcacctgctacggacagtaaagctgctc
gaagcctcaactgtggggccctctcagtcccatggtgatgacaggactctctgttctgag
gacagtggcattggtgtggacaatgaatccctcaaagagttcagtgctctcagtcagcat
ggaggacagccaagcgactcctgtgcacacgaacatccatcccgaaaacatgctggaaca
gcggagcgtgtgaatggtgggacagcatcagtgggcacagctgcatcccatggctgtgct
cttcaaaggcattttaaagacatgtttcgttcatctgtgcaaaggagggaagcaacttct
tgtcagggtggagtagcagaaggcacttctaccatggcccaatatgcaaacttgagcaaa
agccgatcctacaactccttgcagtctgattctactcaggaaggtgaacatttcaaaatc
tgtgaatcaacagattttccttctgatgaggatgaggatgatgacgatggtgaagaagag
agcacactgggggaggatgatgacaacacaagtttatcagaaatggggaaggatgttctg
ccgaggtctctgtcttcacctgcactcatcactgataacgttcaaaggcagtccatcaaa
aggacagagaacacagacacagaagaaataattttgaagatgaaagacgccattagtgaa
aaaatcaagtttgtcccagctaaatccaggcgtaaagaatggatagaggatgagagtgga
agagcagtcctagcaaaaaggcccagtacagcaacaggcagacagagaaagtttgggaaa
caacgacggtccaggtcagaggaatccctcagaagccaggcagaggacccgactctccta
gagcttcagaggactcaaaaggagctcagcaaaaggctggaaatgttgtgtggaaaggat
atagctaacaaccaggagctttggaaatcaagaacagcaccttatttgcaggatgagcaa
attacatctaggtcctcccgcaagctgaaggcaggccttgcaaaaaatttcagcatcctg
cctaaccaggataaagtccctttgttcacatctgatcaaaatcctgtccttccactgaat
gaaaagagagtcaggaatcctgtaagagctactgtgcctacccaggagacaccaggaggc
aaagaaaacgggcctcctggagcacaaatgttgagtggcagcggctgtacctcccggcag
tccgtcagaaagctgattgaaaccttcagtcctactggtgatcttgcaaaacccacacct
ttaagaaacttaggaccaataaagtgcatcagaaaatttggacttccagtcatcccaccc
accacttcctttcagagaggcctggcacctttcaatcttaagcatcgtatttcaccagta
gaagacacaaacaccagtgatgtttcttctagctttccaaatacctttcttcctgcacca
cctgcagaattaagcaagaaggacacaaaggaagagaccgatgaagacactgagaacctg
ccaccaccaccacctgaaatgttaatggacacttcttccgaaaatttatccgagcctgaa
gaaactggaagtatagaaggaaactcttcagaagatgccaaaaagaccaccaaaccagaa
ctgcatgctgctaagagatcacaaatttccccaaaaatgaaagcctcccttcagtccatc
gacttactaccaagtaaaaatatcagtggccccagtgcggtaacgaataaaggtctaagg
aatacgaggtcaggggatgagaaactgcacaggtactctctggagctgaaccctaccaat
gtgcacatccctagccaagaggagatattagcaacccaaaggaaagaggctgctgattta
tacaagcaaacccataagattattcctcttcgaaatcctagtgaggtttcaaacccacac
agcaacagctcagagagcaagggccccaatccacctgcaccttcagtgccgtgccagaag
cacggctctcccgatccgctccggagcagtgagaaagcctcactgttcaccaggagggtc
tccccaacgagaacttctccttcttcatcaactgagaaactgcttttcagccccccagca
catcacaggcattctctgcaggcttttagcaacgctcaaccaagctcacccaccatgcag
aggaaacccagtcctccttctagccccaggatgcccagcccacctttgcagaagaagctt
ccctctccaccaccgcagcgaaaaccactcagccctcccgtggggcacaagcaaagctca
ccaacagcacagcggctggcaggctcccccgctccattccccaccaccccatccccacca
gcctccccatctcgctcctacaaggggccaagagctgggctggatgctggggatgaccac
cagctctcctcctctaagaggggcagcaatgtccattccatattttgcccagccacctct
tccttattcgaagccaaacctccagtggtacccagcaaatgcactgcagaggtgactagc
cagcttgaagctgcatcacattccccaaagagcagcctgctgttccagcagcccggaggc
cggaccaggaagctgtccctgagcaccactaatcctcagccattcgtaaggagaagtttc
tctgaccgccgaccaggggtccagcctcatcttccagctcctctaacagctggcagtgaa
cccgcacttaaccaagcaagcttggagaagagcccaagaaaagcaggtgactcttggaac
agctctggcgttcctgaagccaaagagtccaacagatctgcttcccaccccgagctctac
gtcgtgggccaagggctgcagagggactga
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