Cinclus cinclus (white-throated dipper): 134042246
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Entry
134042246 CDS
T10813
Symbol
RPS27A
Name
(RefSeq) ubiquitin-ribosomal protein eS31 fusion protein
KO
K02977
ubiquitin-small subunit ribosomal protein S27Ae
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic03010
Ribosome
ccic04120
Ubiquitin mediated proteolysis
ccic04137
Mitophagy - animal
ccic04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
134042246 (RPS27A)
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
134042246 (RPS27A)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
134042246 (RPS27A)
04137 Mitophagy - animal
134042246 (RPS27A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
ccic03011
]
134042246 (RPS27A)
04121 Ubiquitin system [BR:
ccic04121
]
134042246 (RPS27A)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccic04147
]
134042246 (RPS27A)
Ribosome [BR:
ccic03011
]
Ribosomal proteins
Eukaryotes
Small subunit
134042246 (RPS27A)
Archaea
134042246 (RPS27A)
Ubiquitin system [BR:
ccic04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
134042246 (RPS27A)
Exosome [BR:
ccic04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
134042246 (RPS27A)
Exosomal proteins of colorectal cancer cells
134042246 (RPS27A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_S27
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
DUF2604
Dsc3_N
IBR
TBK1_ULD
OTU1_UBXL
Ubiquitin_5
Motif
Other DBs
NCBI-GeneID:
134042246
NCBI-ProteinID:
XP_062345388
LinkDB
All DBs
Position
3:102602356..102604087
Genome browser
AA seq
156 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGAKKRKKKSYTTPKKNKHKRKKVKLAVLKYYKVDENGKISRLRRE
CPSEECGAGVFMASHFDRHYCGKCCLTYCFNKPEDK
NT seq
471 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcttcgtgaagaccctcacggggaaaaccatcaccctcgaggttgaaccttct
gataccatagaaaatgtaaaagcgaagatccaggacaaggagggcatccctccggatcag
cagcggctgatctttgctgggaagcagctggaggatggacgcacgttgtccgactacaac
attcaaaaagagtcaacccttcacctggtgctgagacttcgtggtggtgctaagaaaagg
aagaagaagtcttacacgactcccaagaagaacaagcacaagagaaagaaggttaagctt
gcagtgctcaagtactacaaggtggatgagaacggcaagatcagccgcctgcgccgggag
tgcccctcggaggagtgtggggctggagtcttcatggccagtcacttcgacagacactac
tgtggcaagtgctgtctgacatactgcttcaataagccagaagacaagtaa
DBGET
integrated database retrieval system
