Cinclus cinclus (white-throated dipper): 134042312
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Entry
134042312 CDS
T10813
Symbol
PEX6
Name
(RefSeq) peroxisome biogenesis factor 6
KO
K13339
peroxin-6
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
134042312 (PEX6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccic04131
]
134042312 (PEX6)
Membrane trafficking [BR:
ccic04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
134042312 (PEX6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_16
AAA_lid_3
AAA_5
AAA_22
Mg_chelatase
PEX6_4th
nSTAND3
Vps4_C
TsaE
RuvB_N
AAA_25
RNA_helicase
NPHP3_N
AAA_33
bpMoxR
DUF815
TIP49
Parvo_NS1
AAA_28
IstB_IS21
AAA_14
AAA_24
Motif
Other DBs
NCBI-GeneID:
134042312
NCBI-ProteinID:
XP_062345487
LinkDB
All DBs
Position
3:complement(116355251..116369282)
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AA seq
972 aa
AA seq
DB search
MAVAVLRPLDAAPAELSPATALLLAPAGLCAALRGRGGALVLAVRPAGRGGAQPVLLSAV
ALEAGGRRGAELWLRGALLRRLGLAAGRRVAVWPVRRPPALAWVLLGAAGRAGRLAGGAV
LARRGEALPGPGPGPGPLVLEARPALQGLLGSGTRTALAPPPPAPPGASRGRPHPSAAPP
LVSRFAAAASAGPRLRAVPGGAGGGGAEVWVSRRGLLALGLFQGEWVRVGAEGAAREHLA
ALLARPPPWEYPRAARRGLADGTALLAPALAFNLGCDPAASAHLRLQRYERTGAADGKGS
RSVLSVPPFAKELRLEIVCSPAYSARGSYDSVLYRHFETPRLVQEGDILCVPTFGNAEFI
ELNADKFLRWPELYFKVKKVVGMVEGEQSEGYLVDTQNTSLYLVGSTNSTVPSAPAYNSN
EFWSSLSPAGLSDVVKQLCDALRPHLNRRASALSGVGSVLLSGPSGSGKLMAVRAVCSCL
NLHLFKVDCVSLCGDTSAATEEKVQVAFSQAQQYQPCVLLLKDIEVLGRDRDGLGEDARV
IATLRQLLLDRDPALSHPVVVIGTTCKPQDVPTDVQTAFLHEVNIKAPSEEQRRLMLSML
TASLPLGKEVSLSKLARRTAGFVLGDFCALLSYSSRAACTRIQALSFPGGLSEEVERDFC
TAGFPVLEEDFSAALDQLHDVHSQAVGAPKIPSVSWQDVGGLQDVKKEILDTIQLPLEHP
ELLSLGLCRSGLLLYGPPGTGKTLLAKAVATTCTMTFLSVKGPELINMYVGQSEENVRNV
FARARAAAPCIIFFDELDSLAPSRGRSGDSGGVMDRVVSQLLAELDGLHSSREVFVIGAT
NRPDLLDPALLRPGRFDKLVYVGISEDRESQLQVLSAVTRKFKLDPSVNLTTILEKCPAQ
LTGADIYALCSDAMMCAVKRKVEWIEEGLDTEKSALILTMEDFLQAAARLQPSVSEQELL
RYRLIQQKFAAS
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggccgtgctgcggccgctggacgcggcgccggccgagctgtctccggccacg
gcgctgctgctggcgccggcggggctgtgcgcggcgctgcgcgggcggggcggagcgctg
gtgctggcggtgcggccggcggggcgcggcggggcgcagccggtgctgctgagcgccgtg
gcgctggaggcgggcgggcggcgcggcgcggagctgtggctgcgcggggcgctgctgcgg
cggctggggctggcggccggccggagggtggccgtgtggcccgtgcggcgcccgccggcg
ctcgcctgggtgctgctgggggcggcggggcgggcgggaaggttggcgggcggcgcggtg
ctggcgcggcggggcgaggcgctgccggggccgggccccgggccgggcccgctggtgctg
gaggcgcgcccggcgctccaggggttgctgggcagcgggacgcgcaccgccctggcgccc
ccgccgcccgccccgccgggcgcctcccgcggccgcccccatccctccgccgcgccgccc
ctcgtctcccgcttcgccgccgccgcctccgccgggccgcggctgcgggcggtgcccggc
ggggcgggcggcggcggcgccgaggtttgggtgagccggcgcgggctgctggcgctgggg
ctgttccagggcgagtgggtgcgagtgggcgcggagggggctgcccgtgagcacctggcg
gcgctgctggcgcggccgccgccctgggagtacccgcgggccgcccgccgcggactggcc
gacggcaccgcgctgctggccccggccctggccttcaacctgggctgcgaccccgccgcc
tccgcgcacctccgcctgcagaggtacgaaaggaccggcgccgcggatgggaagggcagc
aggtccgttctgtctgtgcccccgttcgccaaggagctgcgcctggagatcgtctgctcg
ccggcctacagcgcccggggaagctacgacagcgtgctctataggcacttcgaaacaccg
cggctggttcaggagggagacatcctgtgtgttccaacatttggaaatgctgaatttata
gaactaaatgcagacaagttcctaaggtggccagagctttatttcaaggtgaagaaggtc
gtgggcatggtggaaggcgagcagtccgagggttacctggtggacacccagaacacgtct
ctctatctggtgggttcaacaaatagcactgtcccatctgccccagcctataacagcaac
gagttctggagcagtttgtctcccgcgggactttctgacgtcgtgaaacagctctgcgat
gctcttcggcctcacctgaaccgtcgggccagtgcgctgagcggcgtgggcagcgttctc
ctctcggggccgagcggcagcgggaagctgatggctgtcagagctgtgtgcagctgcctc
aacctccacctcttcaaggttgattgcgtcagcttgtgcggtgacaccagcgcagccaca
gaggagaaagtgcaggtggccttcagccaggcccagcagtaccagccctgtgtgctcctg
ctgaaagacatcgaggtgcttggcagagaccgagacgggctcggtgaggatgccagggtc
attgctactctgaggcagctgctcctggacagagacccagcactgagccaccctgtcgtc
gtgattggcacaacctgcaagccccaggatgttcccacagacgtgcagactgctttcctt
catgaggtgaacatcaaagccccttcagaggagcagaggaggttgatgctgagcatgctg
actgccagcctgccgctgggcaaagaagtgagcctgtccaagctggcccgcaggactgcc
ggatttgtgctgggagatttctgtgccttgttgtcctacagcagccgggctgcttgcacc
cgcatccaggcattgagttttcccggcggactgagcgaagaagtggagagggatttttgc
actgctgggttccctgtgctcgaggaggatttcagtgctgcactggaccagctgcatgat
gttcattcacaggcagtgggagccccaaagatcccctcagtgtcctggcaggatgttggt
gggctgcaggacgtgaagaaggagatcctggacactattcagttgcccctggagcaccca
gagctgctgtcactgggtctgtgccgctctggtctgctgctgtatgggcctccggggaca
gggaagaccttgctggcaaaagccgtggcaacaacgtgcaccatgacattcctcagcgtg
aaagggccagagctcatcaacatgtacgttgggcagagtgaggagaacgtgcgcaatgtg
tttgccagagccagggcagctgctccctgcatcatcttctttgatgaactggattccctg
gcccccagtcgtgggcgaagtggagattcagggggtgtcatggacagagttgtctcacag
ctccttgcagagcttgatggccttcattccagcagagaggtgtttgtcattggagccacg
aacaggcctgacctcttggacccagctctgctacggccaggcaggtttgacaagctggtc
tacgtgggcatcagcgaggaccgggagtcgcagctgcaggtgctgagcgccgtcaccagg
aagtttaaactggatccttctgtgaatctcaccaccatcctcgaaaaatgcccagctcag
ctgacaggagcagatatctatgccctgtgttcagatgccatgatgtgtgctgtgaaacgc
aaggtggagtggattgaggaagggctggatactgagaagtctgctctgatcctgaccatg
gaagacttcctgcaggctgctgccaggttgcagccatcagtctctgagcaggagctgctc
aggtacagactcatccagcagaagtttgcggcctcctaa
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