KEGG   Cinclus cinclus (white-throated dipper): 134042384
Entry
134042384         CDS       T10813                                 
Symbol
CDC5L
Name
(RefSeq) cell division cycle 5-like protein
  KO
K12860  pre-mRNA-splicing factor CDC5/CEF1
Organism
ccic  Cinclus cinclus (white-throated dipper)
Pathway
ccic03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ccic00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    134042384 (CDC5L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ccic03041]
    134042384 (CDC5L)
   03400 DNA repair and recombination proteins [BR:ccic03400]
    134042384 (CDC5L)
Spliceosome [BR:ccic03041]
 Complex B
  Other components
   Prp19 complex
    134042384 (CDC5L)
 Complex C
   Prp19-CDC5 complex
    134042384 (CDC5L)
DNA repair and recombination proteins [BR:ccic03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    134042384 (CDC5L)
SSDB
Motif
Pfam: Myb_Cef Myb_DNA-binding Myb_DNA-bind_6 TPR_HPS5_insect Rap1_C
Other DBs
NCBI-GeneID: 134042384
NCBI-ProteinID: XP_062345608
LinkDB
Position
3:4830415..4860966
AA seq 803 aa
MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKK
TEWSREEEEKLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEFLLDKAAQRDNEEETADDP
RKLKPGEIDPNPETKPARPDPIDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEAR
RLAALQKRRELRAAGIEIQKKRKKKRGVDYNAEIPFEKKPAPGFYDTSEENYQSLDADFR
RLRQQDLDGELRSEREGRERKKDKQHMKRKKESDLPSAILQTSGVSEFTKKRSKLVLPAP
QISDTELEEVVKVGQASEIARQTAEESGITNSASSTLLSEYNVTNNSIALRTPKTPAAQD
RILQEAQNLMALTNVDTPLKGGLNTPLHESDFSGVTPQKQVVQTPNTVLSTPFRTPSQGS
ESLTPRGGLTPKPALGTTPGRTPLRDKLNINPEEGMADYSDPSYVKQMERESREHLRLGL
MALPAPKNDFEIVLPENAEKELEEHEVDETFVEDAADIEARKQALREAERAKELKRMHKA
VQKNLPRPSEVNETILRPLNVEPPLTDLQKSEELIKKEMITMLHFDLLHHPFGEQFTGKK
GKGPGFGSNNAEHMAYLEQNPYEKFSKEDLKKAQDLLAQEMEVVKQGMGHGELSSEAYNQ
VWEECYSQVLYLPGQSRYTRANLASKKDRIESLEKRLEINRGHMTTEAKRAAKMEKKLKI
LLGGYQSRAMGLIKQLNDLWDQIEQAHLELRTFEELKKHEDAAIPRRLECLKEDVQRQQE
REKELQQRFADFMLDKETFQAKY
NT seq 2412 nt   +upstreamnt  +downstreamnt
atgccgcggattatgattaaaggcggcgtgtggcggaacaccgaggatgaaattctgaaa
gcggctgttatgaaatatggcaaaaaccagtggtctcgaattgcctcgttactgcacagg
aaatcagcaaagcagtgcaaagccagatggtatgaatggctggacccgagcatcaaaaag
acagagtggtctcgggaggaggaggagaaactgttgcaccttgccaagctgatgccaacc
cagtggagaaccattgcccccatcattgggagaactgctgcacagtgcttggaacactat
gaatttctgctggacaaagctgctcagagagacaatgaagaggaaactgctgatgatcct
cggaaactgaaacctggagaaatcgatccaaatccagaaaccaaacctgccaggccagat
cccattgacatggacgaagatgagcttgaaatgctgtctgaggctcgagcacgtctggca
aatacacagggaaagaaggccaagaggaaagccagggagaagcagctggaagaagctcga
cgtcttgctgctctccagaaaagacgagaacttcgcgctgctggaattgagatccagaag
aaaagaaaaaagaagagaggtgtggattacaatgcagaaattccatttgaaaagaagcca
gcccctggtttttatgatacatcagaagaaaattaccagtccctggatgcagatttcagg
agacttcgtcagcaagacctggatggagaattaagatctgagagggagggaagagagcgc
aaaaaggacaagcaacacatgaaacggaaaaaagagtcagacttgccctcagctattctg
cagaccagtggagtgtcagaatttaccaagaaaaggagtaaactggtgcttccagcacct
cagatatctgatacagaacttgaagaagttgtaaaagtcggccaggcaagcgagatcgca
cggcagactgctgaggaatctggaatcacaaactcagcttccagcactcttctctctgag
tataatgtaaccaacaacagcatagcactaaggactcccaaaactccagcagcccaggac
aggatcctgcaggaggcccagaatctgatggctctcacaaatgtggacacccccctgaag
ggaggtcttaatactcccttgcatgaaagtgacttttcaggggtaacaccacagaaacag
gttgttcagactccaaatactgtgctttccacacctttcagaacaccctctcaggggtca
gagagcttaactccgcgaggaggactgactcccaaacctgcacttggcacaactcctggg
agaactcccctgcgggataaactgaacatcaacccagaagagggaatggcagattatagt
gatccatcctatgtaaaacaaatggagagggagtctcgggagcacctgcgcctggggctc
atggccctccctgctccaaagaatgactttgagattgttctacctgaaaatgcagagaag
gaacttgaagaacatgaagtagatgaaacctttgtagaagatgctgctgatatagaagcc
cgcaagcaggcgctccgagaagcagagcgtgccaaggaactgaagagaatgcacaaagct
gtgcagaagaatctaccacggccctcagaagttaatgaaacaatactgagacccttaaat
gtggaacctcctctaacagacttgcagaagagtgaagaactcataaagaaagagatgatt
actatgcttcattttgatcttttacaccatccatttggagaacagtttactggcaagaaa
gggaaaggcccaggatttggaagcaacaatgcagagcacatggcttacttggaacaaaat
ccttatgagaagttctccaaagaggatctcaagaaggcacaggatctgctggcacaagag
atggaggtggtaaagcaaggaatggggcatggagagctgtcaagtgaagcttataaccag
gtgtgggaagaatgttacagccaagtgttgtacctgcctggacagagccgctacacaagg
gctaacttagccagcaaaaaagacagaatagagtcacttgaaaagagactcgagatcaac
agaggccacatgaccactgaagccaagagggctgccaagatggagaagaagctgaagatc
cttcttggtggttaccagtcccgagcaatggggctcatcaagcagctgaatgatctgtgg
gaccagattgagcaggcccacctggagctgcgcacctttgaggagctgaagaaacacgag
gatgctgcgatccctcggagactggagtgtctgaaggaagatgtgcagcgacagcaggag
agagaaaaggagctccagcagagatttgctgatttcatgttggataaagagacttttcaa
gcaaagtattaa

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