Cinclus cinclus (white-throated dipper): 134042479
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Entry
134042479 CDS
T10813
Symbol
ASCC3
Name
(RefSeq) activating signal cointegrator 1 complex subunit 3
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
ccic Cinclus cinclus (white-throated dipper)
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccic03400
]
134042479 (ASCC3)
Enzymes [BR:
ccic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
134042479 (ASCC3)
DNA repair and recombination proteins [BR:
ccic03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
134042479 (ASCC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
ResIII
Helicase_C
AAA_22
Helicase_PWI
AAA_19
Motif
Other DBs
NCBI-GeneID:
134042479
NCBI-ProteinID:
XP_062345891
LinkDB
All DBs
Position
3:complement(40684900..40936595)
Genome browser
AA seq
2207 aa
AA seq
DB search
MALPRLTGALRSFSNVTKHEDYSEELADLTTKRSKLHAQLLKSDLTWKKIIKFVDDNLDK
KEYQTVNGDLKTILQAAKQIVGAENGQEAIESGAVFLFKTFHGKECVGHDETKVIKQMFG
PFPSSSATAACNATSRIASHFTEEQLRALIQLAEEQNGDNRVLFGRNIVFSFDMHDLDHS
EELPVNGETDSQKNISLDYNKFLNNHLNHLQNYCDEKSNIKSLEKIDDSFLWCEVGKYLK
ESQGGNPGGPTTEDLCCTLYEILASTKSADELQNELFELLGPEGFELIEKLLQNRSLILQ
RSLTCPNDNRFQALQEQCKKFIGENAKPNYGCQVTIQSEQEKLLMKQYRREEKRNARKEK
QSGEDGEVSGEGQMSFDPKELRMQRELALLNARSMPVLGRQREISIEKIHYPHVYDSRAE
AMKTSAFIGGAKVALPESVQRENNKMYEEVKIPHSEPMPIGIEEKIVYIKDLDEIGQLAF
KGMKRLNRIQSIVFETAYNTNENMLICAPTGAGKTNIAMLTILHEIRQHVQHGVIKKDEF
KIVYVAPMKALAAEMTNYFSKRLEPLGITVKELTGDMQLSKGEILRTQMLVTTPEKWDVV
TRKSVGDVALSQLVKLLILDEVHLLHEDRGPVLESIVARTLRQVESTQSMIRILGLSATL
PNYLDVATFLHVNPYIGLFYFDGRFRPVPLGQTFIGIKTTNKVQQLNHMDEVCYESVLKQ
IMAGHQVMVFVHARNATVRTAMALREKAKNNGHICHFLSPQGSEYGQAEKQVQRSRNKQL
RELFPDGFSIHHAGMLRQDRSLVENLFSNGHIKVLVCTATLAWGVNLPAHAVVIKGTQIY
AAKRGSFVDLGILDVMQIFGRAGRPQFDKFGEGIIITTHDKLSHYLTLLTQQNPIESQFL
ESLADNLNAEIALGTVTNVEEAVKWISYTYLYVRMRANPLVYGISHKAYQMDPVLEKHRE
QLVIEVGRKLDKARMIRFEERTGFFSSTDLGRTASHYYIKYNTIETFNELFDAHKTEGDI
LAIVSKAEEFEQIKVREEEIEELDTLLNDFCELPAPGGVENNYGKINILLQTYISRGEMD
SFSLISDSAYVAQNAARIVRALFEIALRKRWPAMTYRLLNLSKVIDKRLWGWVSPLRQFS
VLPPSVLSKLEEKNLTIDKMKDMRKDEIGHMLHHVKIGLKVKQCVHQIPSIIMEATIQPI
TRTVLRVRLNIAPDFTWNDQVHGSVGEPWWIWVEDPTNDHIYHSEYFIIQKKQVITKEPQ
LLVFTIPIFEPLPSQYYIRAVSDRWLGAEAVCIINFQHLILPERHPPHTELLDLQPLPIT
ALGHPEYEVLYKFTHFNPIQTQIFHTLYHTDCNVLLGAPTGSGKTVAAELAIFRVFNKYP
TSKAVYIAPLKALVRERIEDWKVRIEEKLGKKVVELTGDVTPDMRAIAQADLIVTTPEKW
DGVSRSWQNRSYVQKVAILIIDEIHLLGDERGPVLEVIVSRTNFISSHTEKPVRVVGLST
ALANARDLADWLNINQMGLFNFRPSVRPVPLEVHIQGFPGQHYCPRMASMNKPAFQAIRS
HSPAKPVLIFVSSRRQTRLTALDLIAFLATEDDPKQWLKMDEREMNDIIVTVRDSNLKLT
LAFGIGMHHAGLHERDRKTVEELFVNCKIQVLIATSTLAWGVNFPAHLVIVKGTEYYDGK
TRRYVDYPITDVLQMMGRAGRPQFDDQGKAVILVHDIKKDFYKKFLYEPFPVESSLLEVL
ADHLNAEIAAGTITSKQDAMDYITWTYFFRRLIMNPTYYNLDDVSHDTVNKYLSSLVEKS
LFDLEGSYCIEVGEDNRSIEPLTYGRIASYYYLKHPTIGMFKDQLKPESNIEELLLILTN
ADEYTDLPVRHNEDQMNSELAKHLPIEVNPHSFDSSHTKTHLLLQAHFSHAMLPCPDYAT
DTKTVLDQAIRICQAMLDVAAHHGWLVTALNITNLVQMVVQGRWIHDSSLLTLPNIELQH
LYLFRKWSQGQRKSVHGGYQGPVECLPELMAACEGKENVFASIVDSELQAAYISQAWNFL
CRLPILNVSLSIKGSWDDAVQPQNEVPVPSLTTDIRDDKKWIKLHADQEYVLQINLHRTQ
MGYQGKQDSKAMAPRFPKVKDEGWFLILGEVDKKELIALKRTGYVRNRSTVSVAFYTPET
PGKCIYTLYLMSDSYLGMDQQYDIYLNIVPAQGTTEGTEAKSHLALK
NT seq
6624 nt
NT seq
+upstream
nt +downstream
nt
atggccttgcctcgtcttacaggcgctttacgctccttttcaaatgtcactaaacatgag
gattacagtgaagaattagctgacttaacgactaaaagatcaaagctacatgcccagttg
ctgaagtctgatcttacgtggaagaagataataaagtttgttgatgataatttggacaaa
aaagaataccaaactgtaaatggtgatttaaaaactatcctacaagctgcaaaacaaata
gttggggctgaaaatggacaagaagcaattgaaagtggagctgtttttctttttaagacc
tttcacgggaaagaatgtgttggccatgatgagacaaaggtgatcaaacagatgtttggg
ccatttccatcatcatctgctactgcagcttgtaatgccacgtctcggattgcttctcac
ttcactgaagaacagcttcgagccctcatacagttggctgaagagcaaaatggtgataac
agagtgttgtttggtagaaacatagtgttttcatttgacatgcatgatttggatcactct
gaagagctgccggtgaatggtgagactgactcacagaaaaatataagcttagattataac
aaatttttgaataaccatctgaatcacttacagaactactgtgatgaaaaatctaatatc
aaatctttggaaaaaatagatgattcttttttatggtgtgaggttggaaagtacctgaag
gaatctcaaggaggtaaccctggagggccaacaacagaagacctctgctgtactttgtat
gagatccttgcttctaccaaaagtgccgatgaacttcaaaatgagttatttgaactgtta
ggccctgaaggttttgaactcatagagaaactcctacagaacagatctctgattctgcaa
agatctttgacttgtccaaatgataacaggttccaggctctccaagaacagtgcaagaag
tttataggagaaaatgctaagccaaattatggttgtcaagtcacaattcagtctgaacaa
gaaaagctgttaatgaaacaatatcgtcgagaagaaaaacgaaatgccagaaaagaaaaa
caatctggggaagatggagaagtttctggagaaggacaaatgtcctttgatcccaaagag
ctgcggatgcaaagagaactagcacttctgaatgctcgaagtatgccagtcctaggtaga
cagagagagataagcatcgaaaaaattcattatccacatgtctatgattcccgagctgaa
gctatgaaaacatcagcattcattgggggtgcaaaggtggccttaccagagtcagttcag
cgagaaaacaataaaatgtatgaagaggtgaagatccctcatagtgaaccaatgcctatt
ggtattgaagagaaaattgtttatattaaagatttagatgagattggacaactggcattt
aaaggcatgaaaaggctaaaccgaatccagtctatagtttttgagactgcctacaacaca
aatgagaacatgctgatctgtgcccccactggagctgggaagactaacattgccatgctg
acaatccttcatgaaattcgccagcatgtccagcatggtgttatcaaaaaggatgagttt
aagattgtgtatgttgctcctatgaaggctttggcagctgaaatgacaaattacttcagc
aagcgtctggagccacttggcattactgtgaaagaattgactggtgatatgcaactgtca
aaaggcgaaattctgcgaacacagatgcttgtgactactccagagaaatgggatgtagtg
acaagaaaaagtgttggtgatgtagccctctctcagctggtaaaactcttgattcttgat
gaagttcatctactgcatgaagacagaggacctgtactcgaaagtatagtagcacgtact
ttacgacaggttgaatctacacaaagcatgataaggattttgggcctttcagctacatta
cccaattatcttgatgttgctacatttctacacgtcaatccctacattggattattctac
tttgatggccgtttccgacctgtacctctaggacaaacctttatagggatcaagacaacc
aataaggtgcagcagctgaatcatatggatgaagtatgttatgaaagtgtgctgaagcaa
ataatggctggacaccaggtgatggtgtttgttcatgctagaaatgctacagtacgaact
gctatggctcttcgagaaaaagcaaaaaacaatggtcatatttgtcacttcttgtcaccc
caaggatcagagtatggacaagctgaaaaacaggtacagagatccagaaataagcagtta
cgtgagctgtttccagatggatttagtattcatcatgcaggaatgctgcggcaagacaga
agtttggttgagaacttgttttctaatggacatatcaaagtcttggtttgtacagctaca
cttgcttggggtgtcaatctacctgctcatgctgttgttataaagggaacacaaatatat
gctgcaaaaagaggctcctttgttgaccttggaattttagatgtcatgcagatatttggt
cgagctggacggcctcagtttgacaaattcggagaaggcatcattattacaactcatgat
aaactcagtcattacctgactcttcttacacagcagaacccaattgaaagccagtttctt
gaaagccttgcagacaacttaaatgcagagattgctcttggcacggtaactaatgtggaa
gaagcagtaaagtggataagttacacttatctttatgtacggatgagagcaaatccatta
gtatatggcatcagtcacaaagcttatcagatggatccagttctagaaaagcacagagaa
caattggttattgaagttggcagaaaactggacaaagcccgcatgattcgctttgaagaa
cggactggctttttttcttcaacagatttaggcagaactgccagccactactatattaaa
tacaatactatagagactttcaatgaattgtttgatgcccataaaaccgaaggcgatatt
cttgctatagtatcaaaggctgaagagtttgaacagataaaggtaagagaagaagaaata
gaagagcttgataccttactaaatgatttctgtgaacttcctgctccgggaggtgtggaa
aacaattatggaaaaattaatatcctccttcaaacatacattagcagaggggagatggac
agcttctcccttatttcggattctgcatatgttgcacagaatgcagctcgtattgttcga
gcactttttgagattgccctgaggaaacgttggcctgccatgacatatcggctactgaat
ctcagcaaagtcattgacaagcggctgtggggctgggtgagccctctgaggcagttctca
gtgttgccaccatccgtcctctccaagctggaagagaagaatctcactatagacaagatg
aaggacatgagaaaagatgaaataggtcatatgctgcatcatgtgaaaattgggttaaag
gtaaaacagtgtgtccatcaaataccctccatcataatggaagcaacgatccagccaatc
acccgcacagtgctccgggttcggctgaacatcgctcccgacttcacgtggaacgaccag
gtacacggcagtgttggagagccctggtggatttgggtagaagaccctactaatgatcac
atttatcattcagagtacttcatcattcaaaagaaacaggtcattactaaagaaccacag
ctgctggtcttcacaatcccaatttttgaacctcttccttctcaatattatattcgagct
gtgtctgatagatggttaggagcagaggctgtgtgtatcataaattttcaacatttgatt
cttccagagagacatccaccccacacagagcttctggatcttcagcctttgcctatcaca
gccttgggacatcctgaatatgaagttctgtacaaattcacgcacttcaaccctattcag
acacagatattccacaccctttatcacacagactgcaatgttcttcttggagctcctaca
ggttctggaaaaacagttgcagctgaattagccatcttcagagtttttaacaagtatccc
acatcaaaggcagtgtatattgcacccttaaaagcacttgtccgtgagaggattgaggac
tggaaagttaggattgaagaaaagcttggtaaaaaggttgtagaattgacaggagatgtg
actcctgatatgagagctattgcccaagctgacctgattgttactaccccagagaagtgg
gatggtgtcagcagaagctggcagaacagaagctatgttcagaaagttgccattctcatc
atagatgagatccatcttctaggggatgagagaggcccagtattggaagtcattgtgtct
cgaacaaactttatctcatctcacactgagaagccagtacgagtagttggtttatccact
gctttagcaaacgccagagaccttgctgactggctaaacattaatcagatgggtctgttc
aacttccgaccatcagtgcgcccagttcccctggaggtgcacattcagggcttccccggc
cagcactactgtcctcgcatggccagcatgaacaaacctgcttttcaggcaattcggagt
cattctccagccaagcctgttcttatttttgtgtcatccaggcgtcagacaaggcttact
gccttagatctcatagctttcctagccacggaggatgatcccaaacaatggctgaagatg
gatgaaagagagatgaatgacattatagtcacagttagagattcgaatctgaagctgaca
cttgcttttggaataggcatgcaccatgcaggtctgcatgaaagggacaggaaaactgtg
gaagaattgtttgtgaactgcaaaatccaggttcttattgccacaagcacattagcttgg
ggtgtaaattttccagctcatttagtaattgttaaaggaacagaatactacgatggaaaa
acaaggcgttacgtggattatcccattacagatgtgcttcagatgatggggcgtgctggc
agaccacagttcgatgaccaaggaaaagctgtcattctagttcatgatattaagaaggat
ttctacaaaaaattcctttatgaaccttttccagtggaatcaagcttgttagaggtgcta
gctgaccacttgaatgctgaaatcgctgctggaactattacatctaagcaggatgcaatg
gattatatcacctggacttactttttccgtcgacttataatgaacccaacttactataac
ttggatgatgtgagccatgacactgtgaataagtacctctcaagccttgttgagaaatcc
ctgtttgatttggaaggctcctactgtattgaagttggggaggataatcgcagcattgag
cccctgacgtacggccgcattgcctcctattactatttaaagcatccaactattgggatg
ttcaaggatcagttgaaacctgaaagcaatattgaagaactgctcttaattctgacaaac
gctgacgagtacacagatctgcctgtgagacacaatgaagatcagatgaacagtgaactg
gccaaacaccttccaattgaagtcaatccccattcatttgacagttcacacacaaaaaca
cacctcttgctgcaagcccacttcagtcatgccatgctgccatgtccagattatgcaact
gatacaaagacagtgctggaccaagcaatcagaatatgccaggcaatgctagatgttgca
gcacatcatggctggctggtgactgctctgaacataaccaacctggtgcagatggtggtt
cagggtagatggatacatgactcatccctgcttactttgccaaatatagagctccagcat
ctttacctttttcggaagtggagccaaggccaaaggaagagtgtgcatggaggttaccaa
ggacctgtcgagtgtcttcccgaactaatggctgcctgtgaaggaaaagagaatgttttt
gcttccattgtggacagtgaattgcaagcagcatacatttcacaggcttggaatttcttg
tgccgtttgccaattctaaatgtcagtctgagcattaagggcagctgggatgatgcagtt
cagccacagaacgaagtacctgttccttctttgacaacagacatacgagatgacaagaaa
tggatcaaactgcatgctgatcaagagtatgtgctccaaataaacctgcacaggacccag
atggggtaccagggaaagcaggacagtaaagcaatggctcctaggttccccaaagttaag
gatgaaggatggtttttgatactgggagaagttgataaaaaagaactcatcgccctgaag
agaactggatatgtcagaaatcgaagtactgtttctgttgctttttatactccagaaact
cctggaaagtgcatctacaccctctatctcatgagcgacagctaccttggcatggaccag
cagtacgacatttacctgaacattgtaccagcacaaggcaccacagaggggactgaggcc
aagagccacctggctctgaagtaa
DBGET
integrated database retrieval system
