Cinclus cinclus (white-throated dipper): 134042731
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Entry
134042731 CDS
T10813
Symbol
NRXN1
Name
(RefSeq) neurexin-1 isoform X1
KO
K07377
neurexin
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
134042731 (NRXN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccic04131
]
134042731 (NRXN1)
Membrane trafficking [BR:
ccic04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
134042731 (NRXN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
EGF
Syndecan
EGF_2
Motif
Other DBs
NCBI-GeneID:
134042731
NCBI-ProteinID:
XP_062346509
LinkDB
All DBs
Position
3:complement(98299178..98971829)
Genome browser
AA seq
1512 aa
AA seq
DB search
MGAVLVRRGGCLLLWLALLLGCWAELGSGLEFPGAEGQWTRFPKWNACCESEMSFNMKTR
SSSGLVLYFDDEGFCDFLELILTQGGRLQLSFSIFCAEPATLLSDTAVNDNLWHAVVIRR
HFKNTTLIIDRTEAKWVEVKSKRRDMTVFSGLFLGGLPPELRSATLKLTLSSVKDREPFK
GWITDVRVNYTQTSPVESQEVRLDDEQSRLCARDDVCLNGGVCSVLNDQAVCDCSQTGFR
GKDCSEEDNYVEGLAHLMMGDQGKSKGKEEYIATFKGSEYFCYDLSQNPIQSSSDEITLS
FKTLQRNGLMLHTGKSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFNDNAWHDVK
VTRNLRQHSGIGHAMVNKLHCSVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTAD
LPGSPVSNNFMGCLKEVVYKNNDVRLELSRLAKQGDPKMKIHGVVAFKCENVATLDPITF
ETPESFISLPKWNAKKTGSISFDFRTTEPNGLILFSHGKPRHQKDAKHPQMVKVDFFAIE
MLDGHLYLLLDMGSGTIKIKALQKKVNDGEWYHVDFQRDGRSGTISVNTLRTPYTAPGES
EILDLDDDLYLGGLPENKAGLVFPTEVWTALLNYGYVGCIRDLFIDGQSKDIRQMAEIQS
TAGVKPSCSRETAKPCLSNPCKNNGVCRDGWNRYVCDCSGTGYLGRSCEREATILSYDGS
MFMKIQLPVVMHTEAEDVSLRFRSQRAYGILMATTSRESADTLRLELDAGRVKLTVNLDC
IRINCNSSKGPETLFAGYNLNDNEWHTVRVVRRGKGLKLMVDDQQAVTGQMAGDHTRLEF
HNIETGIITERRYLSSVPSNFIGHLQSLTFNGMAYIDLCKNGDIDYCELNARFGFRNIIA
DPVTFKTKASYVALATLQAYTSMHLFFQFKTTSLDGLILFNSGDGNDFIVVELVKGYLHY
VFDLGNGANLIKGSSNKPLNDNQWHNVMISRDTNNLHTVKIDTKITTQSTAGARNLDLKS
DLYIGGVAKEMFKSLPKLVHAKEGFQGCLASVDLNGRLPDLISDALFCNGQIERGCEVAL
MKADLQGPSTTCQEDSCANQGVCLQQWDGFSCDCSMTSFSGPLCNDPGTTYIFSKGGGQI
TYTWPPNDRPSTRADRLAIGFSTVQKEAVLVRVDSSTGLGDYLELHIHQGKIGVKFNVGT
DDIAIEEMNAIINDGKYHVVRFTRSGGNATLQVDNWPVIERYPAGNNDNERLAIARQRIP
YRLGRVVDEWLLDKGRQLTIFNSQATIKIGGKERGHPFQGQLSGLYYNGLKVLNMAAEND
ANIVIEGNVRLVGEVPSSMTTESTATAMQSEMSTSVMETTTTLATSTARRGKAPTKEPIG
QTTDDILVASAECPSDDEDIDPCEPSSGGLANPTRAGGGREYPGSSEVIRESSSTTGMVV
GIVAAAALCILILLYAMYKYRNRDEGSYHVDESRNYISNSAQSNGAVIKEKQPNSAKSSN
KNKKNKDKEYYV
NT seq
4539 nt
NT seq
+upstream
nt +downstream
nt
atgggggcggtgctggtgcggcgcgggggctgcctgctgctctggctggccttactgctg
ggctgctgggctgagctgggcagcgggctggagttcccgggcgcggagggccagtggacc
cgcttccccaagtggaatgcctgctgcgagagtgaaatgagcttcaacatgaaaacgcgc
agctccagcgggctggtgctctactttgatgacgagggtttctgtgacttcctggagctc
atcctcacccagggagggcggctacagctcagcttctccatcttctgcgccgagcctgcc
accttgctctcggacacggcggtcaacgacaacctctggcacgctgttgtcatccgccgc
cacttcaagaacacgacgctgatcattgaccgaaccgaggccaagtgggtggaggtgaag
tccaaacggcgggacatgactgtcttcagtggcctcttcctaggagggctcccgccagag
ctgcggtcagcgacactaaagctgacgctctcctctgtcaaggaccgggagcccttcaag
ggctggataacagatgtgcgggtgaactacacacagacatcaccggtggagagccaggag
gtgcggctggatgatgagcagagccggctgtgcgccagggacgacgtctgcctcaacggg
ggcgtctgctcggtgctcaatgaccaggctgtctgcgactgctcccaaacgggcttccga
gggaaggactgcagtgaagaagacaactatgtggaaggtctggcgcacctgatgatgggc
gaccaaggtaaaagtaaaggaaaagaagaatatattgcaacattcaagggatcagaatac
ttctgctatgatttatctcagaaccctatacagagtagcagtgatgaaataactctgtca
tttaaaacacttcagaggaacggactgatgcttcacacaggaaaatcggctgattatgtc
aatcttgcactgaaaaatggagctgtctccttggtcattaatttgggctcaggggccttt
gaagcgttggtggaacctgtgaatgggaaatttaatgacaatgcctggcatgatgtgaaa
gtaaccaggaatctgcgtcagcactcaggcattggacacgctatggtaaacaaactacat
tgttcggtgacaatatcagtggatggaattctgaccacaactggatacacgcaagaagac
tacaccatgctgggctctgatgactttttctatgttggaggcagtcctagcacagcagac
cttccagggtctccagtcagtaacaactttatgggctgtctcaaagaggttgtatataaa
aataacgatgtcaggttggagctgtctcgacttgccaagcaaggggatcctaaaatgaag
attcatggggttgtagcatttaaatgtgagaatgttgcaaccttagatccaatcacattt
gaaacaccagagtctttcatctctctgccaaagtggaatgccaagaaaacaggctcaata
tcgtttgactttcgtacaactgaaccaaatggcctgattcttttcagtcatgggaaacca
aggcatcaaaaagatgccaaacatccacagatggtgaaggttgatttttttgcaattgag
atgcttgatggccacctctacctactattagacatgggatcaggtactataaaaataaaa
gccttgcagaagaaggtaaatgatggtgaatggtaccatgtggattttcagcgagatggg
cggtcagggacaatatccgtaaacacgttacgcactccatatactgcaccaggggaaagt
gaaatccttgacttggatgatgacttgtatcttggaggcttaccagaaaataaagcaggc
ctggtcttcccaacagaagtatggacagcactcctcaattatggatacgttggctgcatt
agagatttatttattgatggtcaaagcaaagatattcgacagatggctgaaatccaaagc
acagctggagtaaaaccttcatgctcaagagaaactgcaaaaccttgccttagcaacccc
tgtaaaaacaatggtgtgtgcagggatgggtggaacagatatgtgtgtgattgctctggc
acagggtaccttggcagatcatgtgaaagagaggcaacgattctaagctatgatggaagt
atgtttatgaaaatacagcttcctgttgtgatgcacacagaggccgaagatgtttcttta
aggttcaggtctcagcgagcttatggcattttgatggcaacaacttccagggaatctgca
gatacccttcggttagagctggatgcaggacgagttaagctaacggtcaacctagactgt
atcaggattaactgtaattccagcaaaggcccagaaaccctttttgctggctataacctc
aatgataatgagtggcacacagtgcgtgtggtgcggcgaggaaaaggtttaaagttaatg
gtggatgaccagcaggctgtgacaggtcaaatggctggcgatcacacacgactggaattc
cacaacatagaaacaggaataataacagaacggcgctacctgtcttctgtgccttctaat
tttattgggcatctacagagtctcacatttaatggcatggcatacattgacttatgtaaa
aatggagacatcgattattgtgagctaaatgcaagattcgggttcaggaacatcatagca
gaccctgtaacctttaaaacaaaagcaagttatgttgcactggccacgctacaagcgtac
acatctatgcacctttttttccagttcaaaaccacctccctggatggattgatacttttt
aacagtggcgatggaaatgatttcattgtggttgaattagtaaaagggtatttacactat
gtgtttgacttgggaaatggtgccaacctcatcaagggaagttccaataaacctctgaat
gacaaccagtggcataatgtcatgatatcaagggataccaacaacctacacactgtaaag
attgacactaaaatcacaacacagagcacagcaggagccagaaatttagatctcaaaagt
gatttatatattggaggagtggccaaagagatgtttaaatccttgcccaaactggtgcat
gcaaaggagggattccaaggctgccttgcatcagttgacttgaacggacggctccctgat
ctcatctcagatgctctcttctgcaatgggcaaatagaaagaggatgtgaagttgcattg
atgaaagctgatttgcaaggccccagcaccacgtgccaagaggattcctgtgcaaaccag
ggcgtgtgcttacagcagtgggatggattcagttgtgactgtagcatgacctcctttagt
ggaccattatgcaatgacccggggacaacgtatatctttagcaaaggtggtggacaaatc
acttacacgtggcctcccaacgaccggccaagcactcgagcggacagactggccataggg
tttagcactgtgcaaaaagaggctgtgctggtgcgagtggacagttctactggccttgga
gattatttagagctgcatatccaccagggaaaaattggagttaaattcaacgttgggacg
gatgacatcgccatcgaagagatgaatgccatcattaacgatgggaagtaccatgtggtt
cgcttcacaaggagtggtggcaatgccacactacaggtggacaactggcccgtcatcgag
cgttacccagcaggaaacaatgataacgagcgcctggcgattgctagacagcgaattcca
tatcgacttggtcgagtagttgatgaatggctactcgacaaagggcgtcagctcacaatc
ttcaatagccaagcaaccataaaaattggaggcaaggaacgtggccaccctttccaaggc
cagctctctggtctttactacaatggcttgaaagttctgaatatggcagcagaaaatgat
gccaacatcgtgatagaaggaaatgtgagacttgttggtgaagtgccttcctctatgaca
actgagtccacagccaccgcaatgcagtcggagatgtccacttcagtcatggaaacaact
accacattggccacgagcaccgccagaagaggaaaggctccgaccaaagaacccattggt
cagactacagatgacatcctggtggcctcggctgaatgtcctagcgatgatgaggacatc
gatccctgtgagccgagctcaggtgggttagcaaaccctaccagggcaggaggaggaagg
gagtaccccggctcgtccgaggtgatccgtgaatccagcagcacgacgggcatggtggtt
gggatcgtggcggcagcggcgctgtgcatcctcatcctcctgtatgccatgtacaagtac
aggaatcgagacgaaggatcctaccatgtggatgagagtcgaaactacatcagtaactca
gcacaatccaatggggctgtgatcaaggagaaacagcccaacagcgctaaaagttccaac
aaaaacaagaaaaataaggataaggagtactatgtctga
DBGET
integrated database retrieval system
