Cinclus cinclus (white-throated dipper): 134042749
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Entry
134042749 CDS
T10813
Symbol
SPTBN1
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic04517
IgSF CAM signaling
ccic04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
134042749 (SPTBN1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
134042749 (SPTBN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ccic04812
]
134042749 (SPTBN1)
Cytoskeleton proteins [BR:
ccic04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
134042749 (SPTBN1)
Intermediate filaments
Intermediate filament-binding proteins
134042749 (SPTBN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SLATT_6
SOS1_NGEF_PH
PH_11
Motif
Other DBs
NCBI-GeneID:
134042749
NCBI-ProteinID:
XP_062346574
LinkDB
All DBs
Position
3:102330201..102412858
Genome browser
AA seq
2359 aa
AA seq
DB search
MTTTVATDYDNIEIQQQYSDVNNRWDVDDWDNENSSARLFERSRIKALADEREAVQKKTF
TKWVNSHLARVSCRITDLYTDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKAL
QFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKKSAKDALL
LWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNL
AEQHLGLTKLLDPEDISVDHPDEKSIITYVVTYYHYFSKMKALAVEGKRIGKVLDNAIET
EKMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKG
NLEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRNELIRQEKL
EQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLPAVEAATKKHEAIETDIAAYEERVQA
VVAVAKELETENYHDIKRITARKDNVIRLWEYLLELLRARRQRLEMNLGLQKIFQEMLYI
MDWMDEMKVLLLSQDYGKHLLGVEDLLQKHALVEADIAIQAERVRGVNASAQKFATDGEG
YKPCDPQVIRDRVAHMEFCYQELCQLAAERRARLEESRRLWKFFWEMAEEEGWIREKEQI
LSSDDYGKDLTSVVRLLSKHKAFEDEMSGRSGHFQQAIKEGEDMIAEEHFGSEKIRERIK
DIREQWANLEQLSDIRKKRLEEASLLHQFQADADDIDAWMLDILKIVSSNDVGHDEYSTQ
SLVKKHKDVAEEIASYRPTIDSLHEQAKALPQEHVESPDVQGRLSGIEERYKEVAELTRL
RKQALQDTLALYKMFSEADACELWIDEKEKWLNNMQIPEKLEDLEVIQHRFESLEPEMNN
QASRVAVVNQIARQLMHSGHPGEKIKAQQDKLNTRWSQFRELVDRKKDALLSALSIQNYH
LECNETKSWIREKTKVIESTQDLGNDLAGVMALQRKLTGMERDLVAIEAKLSDLQKEAEK
LESEHPDQAQAILSRLAEINDVWEEMKTTLKNREESLGEASKLQQFLRDLDDFQSWLSRT
QTAIASEDMPNTLTEAEKLLTQHENIKNEINNYEEDYQKMRDMGEMVTQGQTDAQYMFLR
QRLQALDTGWNELHKMWENRQNLLSQSHAYQLFLRDTKQAEAFLNNQEYVLAHTEMPTTL
EGAEAAIKKQEDFMTTMDANEEKINAVVETGRRLVSDGNINSDKIQEKVDSIDDRHRKNR
EAASELLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQAFMA
ELASNKEWLEKIEKEGMQLIAEKPETEAVVKEKLTGLHQMWDELESTTQTKAQRLFDANK
AELFTQSCADLDKWLNGLESQIQSDDYGKDLTSVNILLKKQQMLENQMDVRKKEIEELQS
QARALSQEGKSTDEVDGKRLTVEKKFLELLEPLNERKANLLASKEIHQFNRDVEDEILWV
GERMPIATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQPRIDDIFERSQNIITESSPNAEV
IQQRLADLKQLWNLLIEETEKRHKRLEESHRAQQYYFDAAEAEAWMSEQELYMMSEEKAK
DEQSAVSMLKKHQILEQAVEDYAETVHQLSKTSRTLVADNHPESERISMRQSKVDKLYAG
LKDLAEERRGKLDERHRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFRE
FARDTGNIGQERVDTVNHMADELINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQILA
ASYELHKFYHDAKEILGRIQDKHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQVRQ
LQEDAARLQAAYAGDKADDIQKRENEVLEAWKALLDACEGRRVRLVDTGDKFRFFSMVRD
LMLWMEDVIRQIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLARKH
YASEEIKEKLLQLTEKRKEMIDKWEDRWEWLRLILEVHQFSRDASVAEAWLLGQEPYLSS
REIGQSVDEVEKLIKRHEAFEKSAATWDERFAALERLTTLELLEVRRQQEEEERKRQPPT
PEPKVAEDGDSQQQWDGTKGEEVSQNGLPSDQESPRVAETAETNEMVNGAAEQRTSSKES
SPIPSPTSDRKAKSGIQAQTAATLPAKTQEIPSAQMEGFLHRKHEWETHSKKASSRSWHN
VYCVINNQEMGFYKDSKAAASGIPYHNEIPVSLKDAVCEVAVDYKKKKHVFKLRLTDGNE
YLFQAKDDEEMNTWIQAITSAISSDKIEVSLTTQSTPASSRAQTLPASVTITSESSPGKR
EKDKEKDKEKRFSLFGKKK
NT seq
7080 nt
NT seq
+upstream
nt +downstream
nt
atgacgacaacggtagcaacagattacgacaacattgaaatccaacagcagtacagtgat
gtcaacaaccgctgggatgtcgacgactgggacaatgagaacagttctgctcggctgttt
gagcgctcccgcatcaaggcactggctgatgaacgtgaggcagttcagaagaagaccttc
acaaagtgggtgaattcccacctggctcgtgtgtcctgccggattacagacctgtacact
gatcttcgagatgggaggatgctcatcaaactcctggaagtgctttcaggagagagactt
cctaaaccaactaaaggaaggatgcgcatccattgcctggagaatgtggataaagctctc
cagttcctgaaagagcaacgagtgcacctggaaaacatgggatctcatgatattgtggat
gggaatcacaggctgacacttggcctcatttggactattatcctgagattccagatccaa
gatatcagcgttgaaactgaagacaacaaagagaagaaatctgctaaagatgctttgctt
ttgtggtgccaaatgaaaacagctgggtaccccaatgtcaatatccacaactttacaaca
agctggagggatgggatggcgttcaatgcactgatccataagcacaggcctgatctgatt
gattttgacaagctgaagaaatcaaatgcacactacaatctgcagaatgcttttaacctt
gcagaacagcaccttggtcttaccaagctcctggacccagaggatatcagtgttgatcac
cctgatgaaaagtcaatcatcacctatgtggtgacatattaccactacttctccaagatg
aaagctttggctgttgaaggaaaacgtataggaaaggtgcttgacaatgccattgaaaca
gagaaaatgatagaaaaatatgagtccctggcttctgacctactggagtggattgagcaa
accattatcatcctcaacaatcgcaaatttgccaactccctggttggagtccagcagcag
ctgcaggcattcaacacttaccgcacagtggagaaaccacccaaatttacagaaaaagga
aacctggaagtgctgctttttaccattcaaagcaaaatgagagccaacaatcagaaagtg
tacatgccgagggagggcaaactcatctctgatattaacaaggcctgggaaagactggaa
aaagctgaacatgaaagagaactggcactgcgaaatgagctcatcagacaagagaaactg
gaacaacttgcgcggaggtttgatcgcaaggcagctatgagagaaacttggctgagtgaa
aatcaacgtctcgtttctcaggacaattttggctttgacctcccagcagtggaggctgcc
acaaagaagcacgaggccattgagacggacattgcagcatatgaggagagggtccaggct
gtggtggcggtggcgaaggagctcgagactgaaaactaccatgatatcaaacgcatcact
gcgaggaaggataatgttatccgcctgtgggagtatctcctggagctgctccgggcacgc
agacaacggctggagatgaaccttgggctgcagaagattttccaggaaatgctctatatt
atggactggatggacgagatgaaggtgcttttgctgtcccaagactatggcaaacatttg
ttgggagttgaagacctgctgcagaagcatgctctggtggaagctgacattgctattcag
gctgagagagtgagaggggtcaatgcctctgctcagaagtttgccaccgatggagaaggt
tacaagccctgtgacccgcaggtgatcagggaccgcgtggctcacatggagttctgctac
caggagctctgccagcttgcggccgagcgccgtgcacgcctcgaggagtcccggcgcctc
tggaaattcttctgggaaatggctgaagaggagggctggatcagggagaaggagcagatc
ctgtcatctgatgattacgggaaggacctaaccagtgtcgtccgactcttgagtaagcac
aaggcgtttgaggacgagatgagtggccgcagcggccactttcagcaggcgataaaagaa
ggtgaagacatgatcgcggaagagcattttgggtctgagaagatcagagaaagaattaag
gatatccgggaacagtgggctaacctggagcagttatctgacattaggaagaagcggctg
gaggaagcctctctccttcaccagttccaggctgacgctgatgatattgatgcatggatg
ttggacatcctcaagattgtctccagcaatgatgttggccatgatgaatattccactcag
tccttggtgaagaaacacaaagatgtggctgaagagattgcgagctaccggccaaccatc
gactctcttcacgagcaggccaaggccctgccacaggagcatgtggagtctccggatgtg
cagggcaggttgtccggaattgaggagaggtacaaagaggtagccgagctgacccggctg
cgtaaacaggccctgcaggataccctcgctctctataagatgttcagtgaggcagatgct
tgtgagctttggatcgatgaaaaggagaagtggctaaacaatatgcagattccagagaag
ctggaggacctggaagtgatccagcacaggtttgaaagcttggagccagaaatgaataac
caggcgtcccgtgtggccgtggtgaaccagattgccaggcagctgatgcacagtggccat
cccggggagaagatcaaagcacagcaagataaactcaacacaaggtggagccagttcaga
gaactggtagataggaagaaggatgctctgctctctgctctgagtatccagaactaccat
cttgaatgtaatgaaaccaagtcctggatcagggaaaagaccaaagtgattgaatctaca
caagacctgggtaatgacctggctggagtgatggccttgcagaggaagctgacaggcatg
gaacgggacctggtggccatcgaagccaagctcagtgacctgcaaaaggaggcagagaaa
ctggaatctgagcatcctgaccaggcacaagccatcctttcacggcttgcagagatcaat
gatgtgtgggaagaaatgaagaccaccctgaagaaccgggaagagtccctgggagaggcc
agcaagctgcagcagttcctgagagatctggatgacttccagtcctggctctccagaaca
cagactgcaattgcctctgaagatatgcccaacaccctgacagaggctgagaagctgctc
actcagcatgagaatatcaagaatgagatcaacaactacgaggaagattatcagaagatg
agggacatgggtgagatggtgacacaagggcaaactgacgctcagtacatgttcctacgc
cagcgcctccaggctttggacacgggctggaatgagcttcacaaaatgtgggagaacagg
caaaatcttctttcccagtctcatgcctaccagctgtttctcagagataccaagcaagca
gaagctttccttaataaccaggagtatgttctggcacatacagagatgccaactaccttg
gaaggagcagaagctgctattaaaaagcaggaggatttcatgaccaccatggatgccaat
gaagaaaagatcaatgcagttgtggagacgggcaggaggctcgttagcgatgggaacatt
aactctgataaaatccaggagaaagtggactctattgatgacagacataggaagaaccgt
gaagcagccagtgaacttctgatgagactgaaagataacagggatctccaaaagtttctt
caggattgccaagagctctccctctggatcaacgagaagatgctcacagcccaggatatg
tcctatgatgaggcaaggaacctgcacagcaagtggctgaagcatcaggcattcatggca
gagcttgcatccaacaaagagtggctggagaagattgagaaggagggaatgcagctcatt
gcagagaaaccagagactgaggccgtggtgaaggagaagctgacaggtctccaccaaatg
tgggacgagcttgaatccaccacccagaccaaggctcagcgtctcttcgatgcaaacaag
gcagaacttttcacccagagctgtgcagacctggataagtggctgaatggtttggagagc
caaatccagtcggatgactatggaaaggatctcaccagtgtcaacatcctgttgaagaag
cagcagatgctggagaatcaaatggatgtccgtaagaaggagatagaggagctgcaaagt
caggcaagggctttgagccaagagggcaagagcacagatgaagtcgatggcaaacgcctt
actgtagaaaagaaattcttggagctgctggagcctttgaatgagagaaaggccaacctg
ctggcctctaaagagatccaccagttcaaccgggatgtggaagatgaaattttgtgggtc
ggagagaggatgcccatagctacatctactgatcatggacacaacctccagactgtgcag
ctactaataaagaaaaatcagacccttcagaaagaaattcagggtcaccagcctcgtatc
gatgacattttcgagaggagtcagaacattatcacagagagcagccccaatgctgaagtc
attcagcagagacttgcagacttgaagcagctgtggaacctcctcatcgaggagacggag
aagcgccacaagcgcctggaggagtctcacagggctcagcagtattactttgatgcagct
gaggctgaggcgtggatgagtgaacaggagctctacatgatgtcagaagagaaagccaag
gatgaacagagtgcagtgtccatgctaaagaaacaccagattttggaacaagctgtagaa
gattatgctgaaactgtgcaccagctttcaaagaccagcagaactttagtggcagataat
cacccagaaagcgagcgcatcagcatgcgccagtccaaggtggacaagctctatgcaggc
ctgaaggaccttgctgaggagaggaggggcaagctggatgagaggcaccggctgttccag
ctcaaccgtgaggtggatgacctggagcagtggattgcagagagggaggtggtggcaggg
tcccacgagctgggccaggactatgaacacgtcacgatgctgcaggagcggttccgggag
tttgctcgggacaccgggaacatcgggcaggagcgggtggacactgtgaaccacatggcc
gatgaactcatcaactctggccactcggatgctgccaccattgccgagtggaaggacgga
ctcaatgaggcctgggcggatctcttggagctcattgacacgagaacacaaatccttgca
gcctcttatgaactgcacaaattttaccatgatgccaaggagatcttagggcgtatccaa
gacaagcataagaaattgcctgaggagcttggtagagaccaaaacacagtggaaacacta
cagagaatgcacacaacgtttgaacacgatatccaggccctgggcactcaggtgcggcag
ctgcaggaggatgcagcacgcctccaggctgcctatgctggggacaaggctgatgacatc
cagaagagggaaaatgaggtcctagaggcatggaaggcactgctggatgcctgtgagggc
cgcagggtgagactggtggacacgggagacaaattccgctttttcagcatggttcgggat
ctcatgctctggatggaagatgttatccggcagatagaggcccaggaaaagccaagggat
gtttcatctgtggaactcctcatgaacaatcaccaggggatcaaagcagaaattgatgcc
cgaaatgacagcttcactacatgcattgagcttggcaagtctctgctggccaggaaacac
tacgcatctgaagagatcaaggaaaagcttctgcagctgacagaaaagagaaaagaaatg
attgacaaatgggaagacagatgggagtggctgagactaattttggaggtgcaccaattc
tccagagatgcaagtgtggctgaggcctggctgctgggacaggagccctacctgtccagt
cgtgaaatagggcagagcgtcgacgaggtggaaaaattaatcaagcggcatgaagcattt
gagaaatccgcagcgacctgggatgaaaggtttgcagcgctggagagactgaccacactg
gaactgctggaagtgcgtcggcagcaagaggaggaggagcggaagaggcagccacccact
ccggagcccaaggttgcagaggatggagactcccagcagcaatgggatgggacaaaagga
gaagaggtttcccaaaatggtttgccctcagaccaggaatctccacgggtggcagaaact
gcagaaaccaatgaaatggttaatggagctgcagagcagaggacgagttccaaagagtcc
agtcccattccttccccgacgtcagaccgcaaagccaagagcggcattcaggcccagact
gctgctaccctcccagccaagacccaggagatcccctcagcccagatggagggcttctta
caccgcaagcatgagtgggagacacacagcaagaaagcctccagcaggtcatggcataac
gtgtactgtgtcatcaacaaccaagagatgggcttctacaaggactcgaaagctgctgct
tctggcatcccttaccacaacgagatccccgtcagcttgaaggacgcagtatgtgaagta
gcggtcgattacaaaaagaagaagcatgtgttcaagctcagattgactgatggcaacgaa
tacctcttccaagccaaagacgatgaggagatgaacacgtggattcaggccatcacatca
gcaatctcttcagacaaaatcgaagtgtccctgaccacccagagcactccagcctccagc
cgtgcccagaccctccctgccagtgttacaataaccagcgagtccagccctggcaagcgg
gagaaagacaaagagaaagacaaagagaaacgattcagcctttttggtaaaaagaagtga
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integrated database retrieval system
