Cinclus cinclus (white-throated dipper): 134042779
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Entry
134042779 CDS
T10813
Symbol
VPS54
Name
(RefSeq) vacuolar protein sorting-associated protein 54 isoform X1
KO
K17600
vacuolar protein sorting-associated protein 54
Organism
ccic Cinclus cinclus (white-throated dipper)
Brite
Protein phosphatases and associated proteins [BR:
ccic01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
134042779 (VPS54)
Membrane trafficking [BR:
ccic04131
]
Endosome - Golgi transport
Tethering complex
GARP complex
134042779 (VPS54)
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
134042779
NCBI-ProteinID:
XP_062346639
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Position
3:114565003..114611587
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AA seq
976 aa
AA seq
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MASSHSSSPVPQSNSSDSFFKKEVDATKRFRPLQSLPDVCPKEPTGNPNNLHDSPSLVVD
QQRWTIYHSKVNLPAALNDPRLAKRESDFFTKTWGVDFVDTEVTPSFYLPQITKEHFALY
QQEITPREKVHERFKNTCTPKDTFDRTLLHTHDKSRTDLEQVPKIFMKPDFALEDSLTFN
AVLPWSHFSTAGGKGNRDAASSKLLQEKLSHYLDIVEVNIAHQISLRSEAFFHAMTSQHE
LQDYLRKTSQAVKLLREKIAKIDKVMCEGSLRVLRLSLTRNNCIKAYNKLKLMATVHQTQ
PTVQLLLSTSEYVGALDLIATTQEVLQQELQGIHSFRHLGSQLCELEKLIDKMMIAEFST
YARNDLNRPLEDGCQILEEERLVSLVFGLLKQRKLNFYEIYGDEMINTAKNIIKQCVVNT
VSQIEEIDTEVVVKLADQMRMMNFPQWFDLLKNIFSKFTIFLKRVKATLNTIRSVVFLVL
DKNQKNRDLEDTLQKSSAKESVVDSEVAYLTHEGMFISDAFGDGELPAGAADSSSQRNTS
PNSEPCSSDSVSEPECTTDSSSSKEHTSSSVTPGGVEMIISEDMKLTDLELIRLANNIQE
LLYNASDVCHDRSVKFLMARAKDGFLEKLNSNEFVTLSRLMEGFILDTEQICGRKSMSLR
GALQSQANRFVNRFHEERKTKLSLLLDNERWKQAEVPAEFQDLVDSVSDGRISLPEKKPT
ATEERKPAEFLIVEGQKYATVGTVLLLIRIILEYCQCVDNIPSITTDMLTRLSDLLKYFN
SRSCQLVLGAGALQVVGLKTITTKNLALSSRCLQLIVHYIPIIRAHFEARLQPKQFSMLR
HFDHITKDYHDHIAEISAKLVAIMDSLFDKLLSKYEVKAPVPSACFRNICKQMAKMHEAI
YDLLPEEQTQMLFLRINASYKLHLKRQLAHLNVVNDGGPLNGLVTSDVAFYTGNLQALKG
LNNLDLNMAEIWEQKR
NT seq
2931 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaagccacagttcttcaccagtgcctcagtcaaacagcagtgattctttcttt
aaaaaagaagtggatgccacgaaacgctttcgccctctgcagtccctgccagatgtgtgt
cccaaggaacccacaggcaatcccaataacttacatgacagcccatctctagttgtggat
cagcaaagatggactatttatcattccaaagtcaatctcccagcagcactaaatgatcct
aggttagcaaaaagggaatctgatttctttacaaaaacatggggagtggactttgtggac
actgaagtcacgccttcattctacctcccacagatcaccaaggaacattttgcattatac
caacaggaaatcactccgagagagaaggttcatgaaaggttcaagaatacttgtactcct
aaagatacctttgacaggacactattacacactcacgataaatccaggacagatctggaa
caagtacctaagatttttatgaaaccagattttgccttggaagattccttaacatttaat
gccgttttaccatggtctcattttagtaccgctggtggaaaaggaaatcgtgatgcagct
tcctccaagttacttcaagaaaagctgagccattatctggacatcgtggaagtaaatatt
gctcatcagatttctctccgctcagaagcattttttcatgcaatgacctctcagcatgag
ttgcaggactacctcaggaaaacctcccaggccgtaaaattgcttagagagaaaatagct
aaaattgacaaagtaatgtgtgaaggatcgcttcgagttttaagactgtcactcaccaga
aataactgtataaaagcatacaataaactgaaattaatggctactgtgcaccaaacacag
cccacagtgcagttgctgctctccacttcagaatatgttggagctttggacttaatagca
acaacacaagaggtgttacagcaagagcttcaaggtattcacagttttcggcatcttggc
tcacagctttgtgaactggaaaagctgatagataaaatgatgattgcagagttttcaact
tacgctcgcaatgatttaaatagacccctagaagatggttgccaaattctagaagaggag
agacttgtatctctagtatttggacttctaaaacaaaggaagctaaatttttatgaaata
tatggagatgaaatgattaatactgcaaagaatataattaaacagtgtgtggttaatacg
gtatcgcagatagaagaaatagatacagaagtggttgttaagcttgcagaccagatgcgg
atgatgaattttcctcagtggtttgatttactgaagaatattttttctaaattcaccatc
tttctcaagagagtaaaggcaacgttaaatactatccgtagcgtggttttcttggttcta
gacaagaaccaaaaaaacagagacctggaggacacgttacaaaagagctctgctaaggag
agcgtggtggacagcgaggtggcctacctgacccacgaggggatgttcatcagcgacgcc
ttcggcgatggggagctcccggccggagcagccgactcgtcctcccaaaggaacacctct
cccaacagcgagccctgcagcagcgactccgtctcggagcccgagtgcaccactgactcc
tcgtccagcaaggagcacacgtcctcttctgttactccaggaggagtagagatgataatc
agcgaggacatgaaactgactgacctggagctgatcaggctggcaaacaatatccaagag
ttactttataatgcctctgatgtctgccacgatcgttcagtcaagttcctcatggcaaga
gcaaaggatggcttcctagagaagctgaattccaacgagtttgttactctttctcgcttg
atggaaggctttatcttggatactgagcagatctgtggcaggaaaagcatgtccttgaga
ggagctcttcagagtcaagccaacagatttgtgaataggtttcatgaggagaggaaaaca
aaactaagcttgcttttggacaatgagcgctggaagcaagctgaagttcctgctgagttc
caggaccttgttgattcggtgtcagatggcagaatttctctccctgaaaaaaaaccaaca
gctactgaagaaagaaagccagctgaattccttattgttgaaggacaaaaatatgcaaca
gttgggacagtattgctgctaataagaataatcctggagtactgccagtgtgtggataat
attccttccatcaccactgacatgctgacccgtctgtcagatttactgaagtatttcaac
tctagaagttgccaattagtgcttggagccggtgcattacaagttgttggcttgaaaaca
atcactacgaaaaacctagccctttcttcacgttgcctccagctcattgtacactacatt
cccattatcagggctcattttgaagctcggctgcagccaaagcagttcagcatgctcagg
cattttgaccacatcacaaaggattatcacgaccacatagctgaaatttcagcaaagctc
gttgccataatggacagcttatttgacaaactattatccaagtatgaagtgaaagcccct
gttccttcagcatgcttcaggaatatctgcaagcaaatggcaaagatgcatgaagctata
tatgatctccttcctgaggagcaaactcagatgttgtttttacgaattaacgcaagctac
aaactccacctgaagaggcagctggcacacctcaatgtggtcaatgatggaggacctctg
aacgggctggttacttcagatgtggctttttacactggaaaccttcaagctctgaaaggc
cttaacaacttagatctaaacatggctgaaatctgggaacagaagaggtga
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