Cinclus cinclus (white-throated dipper): 134042937
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Entry
134042937 CDS
T10813
Symbol
PPARA
Name
(RefSeq) peroxisome proliferator-activated receptor alpha isoform X1
KO
K07294
peroxisome proliferator-activated receptor alpha
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic03320
PPAR signaling pathway
ccic04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
134042937 (PPARA)
03320 PPAR signaling pathway
134042937 (PPARA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccic03000
]
134042937 (PPARA)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ccic03310
]
134042937 (PPARA)
Transcription factors [BR:
ccic03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
134042937 (PPARA)
Nuclear receptors [BR:
ccic03310
]
1. Thyroid hormone like
1C. Peroxisome proliferator-activated receptor (PPAR)
134042937 (PPARA)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Tautomerase
Motif
Other DBs
NCBI-GeneID:
134042937
NCBI-ProteinID:
XP_062346868
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Position
4:21344582..21354177
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AA seq
468 aa
AA seq
DB search
MVDTENQLYPLTPLEEEDIDSPLSGEFLRDMENIQDLSQSLGDDSSGALSLTEFQSLGNG
PGSDGSVITDTLSPASSPSSINFTTAPGSINESPSGALNIECRICGDKASGYHYGVHACE
GCKGFFRRTIRLKLIYDKCDRNCKIQKKNRNKCQYCRFQKCLSVGMSHNAIRFGRMPRSE
KAKLKAEILTGENYVEDSEMADLKSLAKRIHDAYLKNFNMNKVKARIILAGKTNNNPPFV
IHDMDTLCMAEKTLVAKLVANGIQNKEAEVRIFHCCQCTSVETVTELTEFAKSIPGFSNL
DLNDQVTLLKYGVYEAIFAMLASVMNKDGMLVAYGNGFITREFLKSLRKPFCDIMEPKFD
FAMKFNALDLDDSDISLFVAAIICCGDRPGLVNVGHIEKMQESIVHVLKLHLQNNHPDDT
FLFPKLLQKMADLRQLVTEHAQLVQIIKKTESDAHLHPLLQEIYRDMY
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggtggacactgaaaaccagctctatccccttactcccttggaggaggaggatatagac
agccctttatctggagagttcctacgagatatggagaacattcaagacctgtcccagtct
ttaggtgatgatagttctggagcattaagtttaacagaattccagtcgctgggaaatggt
ccaggatctgatggatcggttataacagacaccctttcaccagcatccagtccttcatcc
attaattttaccacagctccaggtagcataaatgaatcacctagtggagcattaaacatt
gaatgtagaatttgtggggataaagcctcaggctaccactacggagtacatgcttgtgaa
ggttgtaagggcttttttagaagaacaattcgtttaaaactcatctatgataaatgtgat
cgcaactgcaaaattcagaaaaaaaatcgtaataagtgccaatactgtcgttttcaaaag
tgcctttcagttggaatgtcacataatgcaatacggtttggacgaatgccaaggtctgag
aaggccaagctcaaagcagaaattctaacaggtgaaaattatgtagaagattcagaaatg
gcagatcttaaatcacttgccaaaagaattcatgatgcctacctgaaaaacttcaatatg
aacaaagtcaaagccagaatcatccttgcagggaaaaccaataacaatccaccatttgtt
atacatgatatggataccttatgtatggcagagaagaccttggtggcaaaactggtagcc
aatgggattcagaacaaggaagcagaagttcgaatcttccactgctgccagtgtacgtct
gtggagactgtcacagaactcacagaatttgccaaatccatcccaggcttctccaacctg
gacttgaacgatcaggtgacactactgaagtatggggtgtatgaagccatatttgccatg
ttggcctctgtgatgaacaaggacgggatgctggtggcctatgggaatggttttataacc
cgggagttcctgaaaagcctgagaaagccattctgtgatataatggagccaaaatttgat
tttgcaatgaaattcaatgcgctggatttggatgatagcgatatatccctttttgttgct
gccattatttgctgtggagatcgtcctggtcttgtaaatgtaggacacattgaaaaaatg
caggagagcattgtgcatgtactgaaacttcacttgcaaaacaaccatcctgacgacacc
ttcctcttcccaaaacttctccaaaaaatggctgacctccgacagctggtcacagagcat
gctcagcttgttcagataatcaagaagactgaatctgatgcacatttacaccctttacta
caggaaatctacagggatatgtattaa
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