Cinclus cinclus (white-throated dipper): 134043001
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Entry
134043001 CDS
T10813
Name
(RefSeq) uncharacterized protein LOC134043001
KO
K16330
pseudouridylate synthase / pseudouridine kinase [EC:
4.2.1.70
2.7.1.83
]
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic00240
Pyrimidine metabolism
ccic01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
134043001
Enzymes [BR:
ccic01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.83 pseudouridine kinase
134043001
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.70 pseudouridylate synthase
134043001
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Indigoidine_A
PfkB
Motif
Other DBs
NCBI-GeneID:
134043001
NCBI-ProteinID:
XP_062346956
LinkDB
All DBs
Position
4
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AA seq
702 aa
AA seq
DB search
MFRKVTFSLGKHVSSMARGTIQVRRLLHGGYVRIHPSVQEALVEGRPVVALESTIITHGM
AYPLNLSMAKEVEEIVRTNGAVPATVGILRGQIHVGLTDEELEFLASSKNAIKVSRRDFP
FVLSQGLSGGTTVSGTMIAAHKAGIPVFVSGGIGGVHRNGENTLDVSADLTELGRTPVAV
VAAGAKSILDIGRTLEYLETQGVCVAAFGESREFPAFFSRRSGFQAPYHVQDEEEAAKLI
DSALGLGLSSGVLIAVPCPQERAAEGQAIEEAIQQALSQARSKGITGKEVTPFLLQKLVE
LTDGKSLDSNLALIQNNARVGSCIAVALSKLQKARRKGNLPRPENMTASQPVVIGGINVD
FLAKTQNPDILGGGQTNAGRVRRTFGGVGRNLADCLSRLGQAPLLLSAVGKDEHLESVLH
YCHHMDMSSVLQLEGKSTATYCAVISSAGELSVGLGDMDIHQQITEQYVSQFKENLCQAP
LVCMDGNVPLSTIQYVCQLAREHQLAVCYEPTDENKASKPFLSDSWKALTYISPNLQELR
AINRTLGNPLPAELPSKLEDVVQAAVALACPLLAHLHCVVVTLGAHGVLLCGKSLGGNIS
LYPGAHEQVAAARLCAAHYPAIPISREEIVNVSGAGDSLMAGILAGMLAKHDTGTCVRMG
LLAASLSLRSYEPVSPEISTSSVSQEQVQSRSWPEVKLWNMD
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgtttaggaaggtaaccttcagcctgggaaaacacgtgtcctccatggcacgtgggacc
atccaggtgagaagacttctgcatggtggttatgtcaggattcatccctctgtacaggaa
gctctggtggaagggagacccgttgtagccttggaaagcaccatcattacacatggcatg
gcctatcctctgaatttgagcatggccaaagaggtggaagaaattgtaagaacaaatgga
gcagtgccagccacagtaggtattttaagggggcaaatccacgtgggactcacagacgag
gaacttgagttcttggcaagcagtaaaaatgcaattaaagtgtctcgcagagattttcct
ttcgtcctcagccagggcttgtctggaggtactactgtgtctggaacaatgattgcagca
cacaaagcaggaattcctgtgtttgtgtcaggtggcataggaggtgttcatcgtaatggg
gagaacactctggatgtgagtgctgacttgacagagttaggacgaactccagtcgctgtt
gtagctgcaggagccaagtctatccttgatattggcaggacgctggaatatctggagact
cagggtgtgtgtgtggctgcctttggagaatcaagagagttcccagccttcttctcacgc
cggagtggcttccaagcaccatatcatgtccaggatgaagaggaggcagctaaactcatt
gacagtgccctggggctgggcctgagcagtggggtgctgatagcagtgccctgtccccag
gagcgagctgccgagggccaggccatcgaagaggccattcagcaagctctcagccaagcc
aggtccaaaggaatcacaggcaaagaagtgaccccctttttgttacagaagctcgtagaa
ttaactgatgggaaatcattggactccaaccttgcactgatccagaacaatgccagagtg
ggcagctgcattgcagtggccctgagcaaactacagaaagccagaaggaaaggaaacctg
cctcggccagagaacatgacagcatcacaaccagtggtgattggcggtatcaacgttgac
tttttagccaagacacagaaccctgacatcctgggcggtgggcaaacaaatgctggaaga
gtgagacgaacctttggcggtgttggaaggaacttggcagactgtttaagccgtcttgga
caagctcctctccttttatcagccgtggggaaggatgagcatttagagtctgtcctgcac
tactgccaccacatggacatgagcagcgtccttcagctggaggggaagagcacagccact
tactgtgctgtgatcagcagtgctggagagctcagcgttggcttgggagacatggacatc
caccagcagataacagagcaatatgtgtcccagttcaaggagaacctgtgtcaggccccg
cttgtttgcatggatggaaatgtgcctctctccactattcagtacgtctgccagctagct
agagagcaccagctagcagtgtgctatgagccaacagatgagaacaaggcctctaagccg
ttcctctcagacagctggaaagcactgacatacatttcccccaacctgcaagagctgaga
gcaataaatcggaccctcgggaatcctctgccagcagagttgccatccaagctggaggat
gttgtccaggctgcagtggccctggcttgccctttgctggcccatctgcactgcgtggtg
gtgaccctcggtgctcacggcgtcctcctgtgcggcaagagcctgggggggaacatctcc
ctttatccaggagcccatgagcaggttgctgctgccaggctctgtgctgcccactacccc
gccatccccatcagcagggaggagatagtcaacgtctcaggagctggtgacagcttaatg
gcaggaatccttgcaggtatgcttgctaaacatgacacaggcacgtgtgtccggatgggt
ctgctggctgccagcttgtctcttcgttcctatgagcctgtttcaccagaaatcagcact
tctagtgtcagccaggagcaagtccagagcaggagctggccagaggtgaagttatggaat
atggactag
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