Cinclus cinclus (white-throated dipper): 134043010
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Entry
134043010 CDS
T10813
Symbol
DDX11
Name
(RefSeq) ATP-dependent DNA helicase DDX11 isoform X1
KO
K11273
chromosome transmission fidelity protein 1 [EC:
5.6.2.7
]
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
134043010 (DDX11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccic03036
]
134043010 (DDX11)
Enzymes [BR:
ccic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
134043010 (DDX11)
Chromosome and associated proteins [BR:
ccic03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
134043010 (DDX11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
134043010
NCBI-ProteinID:
XP_062346969
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Position
4:28038538..28054792
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AA seq
876 aa
AA seq
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MEALYGALEAGRVGIFESPTGTGKSLSLICGALSWLRDWEEKRRQEEARLLALGAGGQDG
LTPQQARPDGGGAAGQPDWVTAFVQKKEERDMVNRLKEEHIRRKKREDSLEKIRHNVQLK
YAAKRKRCEEDEAKRLLQLSKEVLSQGSGEGVLDQLDHNEEELILAEYESDDEKKVVSGL
EEDDDDLEEEHVTKIYYCSRTHSQLSQFVHEVQKSPFGKDTRLVSLGSRQNLCVNEEVRR
LGALQLINDRCMEMQKNKHEKKSDEENEGKKRRVSRTVCPFYSYEQMQFLRDEVLVEVKD
IEQLVSLGRETKACPYYGSRFAIPAAQLVVLPYQMLLHEPTRNAAGIKLKDQVVIIDEAH
NLIDTITCIHSAEVSGSQLCCAHSQLSQYKERYRKRLKAKNLMYIKQILYLLEKFVAMLG
GNVNQNPGCQTVSQTGVVLKSINDFLFQSQTDNINLFKVQRYCEKSLISRKLFGFVERYG
APASAVKISKENQKLTGLQNFLLTLHQGSDKEAGTPQSPPVEAEHDQLRTASPLMQIEGF
LSALTNANQDGRVLLNRQGTVGQSSLKFLLLNPAVHFAKVVEECRAVIIAGGTMQPVADF
REQLLCCAGVDPARIVEFSCGHVIPPENILPIILCSGPSNQQLEFTYQTRDLPQMMDETG
RILCNLCNVILGGVVCFFPSYEYEKQVYGHWEKTGLLSRLSAKKKIFQEPKKANQVEQVL
VEYAKCIKRCSQTGGQMTGALLLSVVGGKMSEGINFSDDLGRCVIMVGMPYPNIRSPELQ
EKMTWLDKTMPRAAGQAPSRVLIENLCMKAVNQSIGRAIRHQKDFASILLLDHRYARPAI
FNKLPQWIRERTQVKPAFGSAFAELRKFHRGKLDAL
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgctgtacggcgcgctggaggccggccgggttggcatcttcgagagccccacg
ggcacgggaaaatcgctgagcctcatctgcggggccctgtcgtggctccgggactgggag
gagaagcggcggcaggaggaggcgcggctgctggcgcttggggctggcgggcaggacggg
ctgaccccgcagcaggcacggccggacggcgggggcgcggccgggcagccggactgggtc
acggccttcgtgcagaagaaagaggagcgggacatggtgaacaggctgaaggaagagcac
atcagaaggaaaaagcgagaagatagtcttgagaaaattcggcacaatgtgcagttaaaa
tacgcagcaaagaggaagagatgtgaggaggatgaggcaaagcgccttcttcagctcagc
aaggaggttctttcacagggatctggagagggtgttctagaccagctggatcacaacgag
gaggagctgattcttgctgaatatgagagtgatgatgaaaagaaggtggtatctgggctg
gaagaagatgacgatgatttggaagaggagcatgtgactaagatctactactgcagccgc
actcactctcagctgtcccagtttgtgcacgaggtgcagaaaagtccttttggcaaagac
acacgtctggtctccttgggatccaggcagaatctgtgtgtgaatgaggaggtgcgacgc
ctgggtgctctccagctcatcaatgaccgctgcatggagatgcaaaagaacaaacatgaa
aagaagagtgatgaggagaatgaggggaagaagagacgtgtgagtcgcactgtgtgccca
ttttattcctatgagcaaatgcagtttctccgtgatgaagttctagtggaagtgaaggat
attgagcagttggtgtccttgggaagggagaccaaagcctgcccatattatgggagtaga
ttcgccatccctgctgctcagctggtggtgctgccctatcaaatgcttttgcatgagcct
accaggaacgctgccgggatcaagctgaaggaccaggttgtgatcattgatgaggcccac
aacctcatagacaccatcacctgtatccatagtgccgaggtcagcggctctcagctgtgc
tgtgcccactcccagctgtcacagtacaaggagcgatacaggaagcgtttgaaggcaaag
aacttgatgtacattaagcagatcctgtatttactggagaagtttgtggctatgctggga
ggtaacgtgaaccagaatcctggatgtcagacagtttctcaaacaggggtggtactaaaa
tccatcaatgactttctatttcagagccagactgacaatatcaacctcttcaaggttcag
cggtactgtgagaagagcctcatcagcaggaagctttttgggtttgtggagagatatggg
gcccctgcctcagctgtgaagatcagtaaggagaaccagaaactgactggtttgcagaac
tttcttctgacccttcaccagggatccgataaagaggcaggtaccccccagagccctccc
gtggaggctgagcatgaccagctccgaactgcctctccactgatgcagattgaaggattt
ctctcagccctcacaaatgcaaaccaagatggcagagtccttctcaacaggcaaggcact
gttggtcagagcagcctcaaattcctcttgctgaatccagctgtccactttgccaaggtt
gtggaagaatgccgtgctgtcatcattgctggaggcaccatgcagccggtggctgacttc
cgagagcagctgctgtgctgtgctggcgtggaccctgcccgtattgtggagttctcctgt
ggacatgtgattcctccagaaaatattttacccatcatcctctgcagtggtccttccaac
cagcagctggagttcacttaccaaaccagagacctgcctcagatgatggatgagacgggt
cgaatcctttgcaacctgtgcaatgtgatactgggaggtgtggtgtgcttcttcccctcc
tacgaatatgagaagcaggtgtatggacactgggagaagacagggctgctctcccgcctg
tcagccaagaagaagatctttcaggagcctaagaaagccaaccaggtggagcaggtgctg
gtggaatatgccaagtgcataaagcgctgcagccagacaggaggacagatgacaggggcc
ctgctgctttctgtagttggaggcaaaatgagtgaagggataaatttctccgatgacctg
ggaaggtgtgtgattatggtgggaatgccttaccccaacattagatctccagaactccag
gaaaaaatgacttggcttgacaaaacaatgcccagagctgctggccaggcaccaagcaga
gtgctgattgaaaacctgtgcatgaaggcagtaaaccagtcaataggcagagccattcgc
catcagaaggactttgcaagcatcctgctcctggatcacaggtacgcacgccctgccatc
tttaacaaactgccccagtggatcagggagaggacccaggtgaaacctgcctttggatca
gcgtttgctgagttaagaaagttccatcgaggcaagttggatgctttgtga
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