Cinclus cinclus (white-throated dipper): 134043074
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Entry
134043074 CDS
T10813
Symbol
CNTN1
Name
(RefSeq) LOW QUALITY PROTEIN: contactin-1
KO
K06759
contactin 1
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic04514
Cell adhesion molecules
Brite
Cell adhesion molecules [BR:
ccic04515
]
Immunoglobulin superfamily
Contactins
134043074 (CNTN1)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ccic00537
]
Others
134043074 (CNTN1)
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
134043074
NCBI-ProteinID:
XP_062347126
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Position
4:38846262..38918346
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AA seq
1105 aa
AA seq
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MMALQCTIPFEIMAERKITIWFFVYHLITPCFAYSLAEEGNKGFGPVFEEQPIDTIYPEE
SSDGQVSMNCRARAVPSPTYRWKLNNWDIDLTKERYSMVGGRLVINNPEKSRDAGKYVCV
VSNLFGTVRSSEATLSFGYLDPFPPEERYEVKVREGVGAVLLCEPPYHYPDDLSYRWLLN
EFPVFIALDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSVFSKFIPLIPQSDR
AKVYPADIKVKFKDTYALLGQNVTLECFALGNPVPELRWSKYLEPLPASAEISMSGAVLK
IFNIQYEDEGLYECEAENYKGKDKHQARVYVQAAPEWVEHINDTERDIGSDLYWPCVATG
KPIPTIRWLKNGASFRKGELRMQSLTFDDAGMYQCIAENMHGIIYSNAELKIVASPPTFE
LNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTELLVNGSRIRIWDDGSLEIINVTK
LDEGRYTCFAENNRGKANSTGVLEMTEATRITLAPLNVDVTVGENATMQCIASHDPTLDL
TFIWSLNGFVIDFEKEHEHYERNVMIKSNGELLIKNVQLRHAGRYMCTAQTIVDNSSASA
DLVVRGPPGPPGGIRVEEIRDTAVALTWSRGTDNHSPISKYTIQSKTFLSEEWKDAKTDP
SDIEGNMESATVIDLIPWMEYEFRIIATNTLGTGEPSMPSQRIRTEGAPPNVAPSDVGGG
GGSNRELTITWMPLSREYHYGNNFGYIVAFKPFGEKEWRRVTVTNPEIGRYVHKDESMPP
STQYQVKVKAFNNKGDGPFSLTAVIYSAQDAPTEIPTDVSVKVLSSSEMSVSWHHVSDKS
VEGYQIRYWAAHDKEAAAQRVQVSNQEYSTKLENLKPNTRYHVDVSAFNSAGYGPPSSTI
DVVTRKAPPSQRPRIISSVRSGSRYIITWDHVKAMSNESAVEGYKVLYRPDGQHEGKLFS
TGKHTIEVPVPSDGEYVVEVRAHSEGGDGEVAQIKISGAAVGVPTLLLVLVVPXPWVSLP
ARDSECSWIHLVLHLTQRTPFEDEDTISFXFLWHHPKPNKLHFKKNNPTNFLXTLRGLRH
PGTPSXNKSTFERLRNIFNLFQYAL
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atgatggcattgcagtgcacaattccttttgagataatggctgaacggaagataaccatt
tggtttttcgtctatcatcttattacaccctgttttgcctactccctggcagaggaagga
aacaaaggttttggacctgtttttgaggagcaacctattgataccatctatccagaagaa
tcttcagatggacaagtttcaatgaactgcagagctcgagcagttccttctcctacttac
aggtggaaactgaacaactgggatattgatttaacaaaggagcgctacagtatggtggga
ggcagacttgttatcaataatccagagaaatcaagggatgctggaaaatatgtctgtgta
gtatcaaatctctttggaactgtcagaagcagtgaagccacactgagttttggatatctg
gatccctttccacctgaggaacgttatgaggttaaagtacgagaaggtgttggagcagtg
cttctttgtgagcccccttaccactacccagatgacctcagttatcgctggcttctaaat
gagttcccagtgttcattgctttggacaaacgacgatttgtgtcacagacgaatggcaat
ctctacattgcaaatgtggaagcatcagataagggcaattattcatgttttgtgtccagc
ccttcgataacaaagagtgtattcagtaaatttattccacttattccacaatctgatcgg
gcaaaagtatatcctgctgatatcaaggtgaagttcaaggacacgtatgctctcctgggg
caaaacgtgacactggagtgttttgctcttggaaatccggttcctgaactcagatggagt
aaataccttgaacccttgccagcctctgctgagataagcatgtctggtgcagttcttaaa
atcttcaatattcagtatgaagatgaagggctttatgagtgtgaagctgaaaactataaa
ggaaaagataaacatcaagcaagagtctatgtacaagctgctcctgagtgggtagaacac
atcaatgacacagaaagggatataggcagtgacctgtactggccttgtgtagctacgggc
aagcctattccaacaattaggtggctgaagaatggtgcctcgttccggaaaggtgaacta
agaatgcaaagtctgacctttgatgatgccggcatgtaccagtgtatagcagaaaatatg
cacggaattatttattcaaatgctgaactgaagattgtggcttcacctcctacttttgaa
ctgaaccctatgaagaagaaaattctagcagctaaaggggggcgtgtaatcattgaatgc
aagcctaaagctgctcctaagccaaaattctcctggagcaaaggaacagaattgcttgta
aatgggagccgcatacgtatctgggatgatgggagcctggaaattatcaatgtcacaaag
ctggatgaaggtcgctacacctgttttgcagaaaataaccgaggaaaagccaatagcact
ggtgttctagaaatgacagaagctacaaggatcactttagctccattgaatgttgatgtc
actgttggagagaatgctaccatgcaatgcattgcatcccatgatcccacattagacctg
acatttatttggtctctaaatggctttgtaatagattttgagaaagaacacgaacattat
gaacggaatgttatgattaaatccaatggtgagctgctgattaaaaatgtccagctgcgg
catgcaggcagatacatgtgcactgctcagaccattgtggacaactcctcagcttcagct
gaccttgtggtaagaggtcctccaggcccccctggaggtataagagtagaagaaattaga
gacactgctgtagcacttacctggagccgtggaacagacaatcatagtcctatttctaaa
tacactatccaatcaaaaacctttctatctgaagagtggaaagatgccaaaacagaccca
tcagatattgaaggaaatatggaatctgctacagtgatcgatttaattccatggatggaa
tatgaattccggataatagcaacaaacactctggggacaggagaacctagtatgccgtca
cagaggattagaactgaaggcgctcctcctaatgtggctccttctgatgttggaggaggg
ggtggaagcaatcgagagctgacaataacatggatgcctttgtcaagagaataccactat
ggcaataattttggttatatagtggccttcaagccatttggtgagaaagaatggagaaga
gttacagttactaatcctgaaattggccgatatgtccacaaggatgaatcaatgccccct
tcaactcagtatcaagtaaaagtgaaagcttttaacaacaaaggggatgggccattcagt
ctcactgctgtaatttattcagcacaagatgctccaactgaaatacctacagatgtgagt
gtaaaagttttgtcatcttctgaaatgtctgtttcttggcaccatgtttctgataaatct
gtggaaggatatcagattcgttactgggctgctcatgataaagaagcagctgcacagcgg
gtacaggtgagcaatcaagagtattcaaccaaactggagaacctgaagcctaacactcgc
taccatgtggatgtgtctgccttcaatagtgcaggctatggacctcccagcagcaccatt
gatgttgttaccaggaaagcacctccaagccaacgtccaagaattatcagttctgtaaga
tctggttcaaggtacatcatcacctgggatcacgtgaaggcaatgtcaaacgagtctgct
gttgaaggatacaaagtactttataggccagatggacagcatgaaggcaagttgttttcc
actggaaagcacacaatagaggtcccagtccccagcgacggtgaatatgtggttgaggtg
cgagcacacagtgaaggaggagatggagaagtagcccaaataaaaatttcaggtgccgct
gttggagtaccaactctgctcctggtcctagtggtgcctnngccctgggtgtccttgcct
gctcgggattctgaatgtagctggattcaccttgtcctccacctaacacaaaggactccc
tttgaagatgaggacacgatttctttttgattcctgtggcaccatcctaagccaaataaa
ttacactttaaaaagaataaccctaccaatttcctataaactttaagaggactgaggcat
ccaggaactccttcatgaaataaatcaacttttgaacggctaagaaatatttttaacttg
ttccaatatgccttataa
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