Cinclus cinclus (white-throated dipper): 134043114
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Entry
134043114 CDS
T10813
Symbol
LGR5
Name
(RefSeq) leucine-rich repeat-containing G-protein coupled receptor 5
KO
K04308
leucine-rich repeat-containing G protein-coupled receptor 5
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
134043114 (LGR5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
ccic04030
]
134043114 (LGR5)
G protein-coupled receptors [BR:
ccic04030
]
Rhodopsin family
Others
R-spondin
134043114 (LGR5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_14
7tm_1
LRR_9
LRR_LRWD1
LRRNT
LRR_EndoS
LRR_Zer-1
7TM_GPCR_Srx
Motif
Other DBs
NCBI-GeneID:
134043114
NCBI-ProteinID:
XP_062347184
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Position
4:46026868..46114654
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AA seq
911 aa
AA seq
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MATTRAARALLLPLLLLLLCPPGLRRGARGGGQRPRGCPAPCRCELDGVLLRADCSDRGL
TSVPANLSVFTSYLDLSMNNITKLPSNPVHNLRFLEELRLAGNGLTYIPKGAFAGLFSLK
VLMLQNNQLRQVPTEALQNLRSLQSLRLDANHINYVPPNCFNGLVSLRHLWLDDNSLTEI
PVQAFRSLPALQAMTLALNKIHYIPDYAFGNLSSLVVLHLHNNRIYSLGKKCFDGLHSLE
TLDLNYNSLDEFPTAIRTLTNLKELGFHSNNIKSIPEHAFVGNPSLITIHFYDNPIQLVG
KSAFQHLPELRTLTLNGASQLTEFPDLTGTTSLESLTLTGAQITSLPKSACDQLPNLQVL
DLSYNLLEDLPCFTACKKLQKIDLHHNEIAEIKADTFRQLAALRSLDLAWNKIKIIHPNA
FSSLPSLIKLDVSSNLLSSFPVTGLHGLTHLKLTGNHALQSLITSENFPELKVMEMPYAY
QCCAFGACENHYRISSQWNKDDNSSIDDFHRKDAGLLQIQDERDFEDFFLDFEEDLKSHH
SVQCSPSPGPFKPCDHLFGSWLIRIGVWTVVGLTFICNALVSATVFRSPLYMSSIKLLIG
LIAIVNALMGLASGVLASVDASTFGSFAQYGAQWESGTGCQVTGLLSIFASEASIFLLTL
AALERAFSVKHAMKFETKSSTASVKIAISFCFMLALIIAVIPLLTGSEYGVSPLCLPLPF
GESTAMGYMVALVLLNSLCFLVMTVAYTKLYCNLEKGELDSIWDCSMVKHIALLLFTNCI
LYCPVAFLSFSSLLNLTFISPEVIKSILLVIVPLPACLNPLLYILFNPHFKEDLGSLRKQ
TLIWRRSKHASLISVNSEDIEKQSCDSTQALVTFTSASISYDMPPSSSLMAPSYQMTEGC
NLSSVAFVPCR
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgacccgcgctgcccgtgccctcctgctgccgctcctcctgctgctgctgtgc
ccgccggggctgcggcggggggcgcggggcggcgggcagcgcccgcggggctgtccggct
ccgtgccgctgcgagctggacggagtgctgctccgcgccgactgctccgaccgcgggctc
acctccgtgcccgccaacctcagcgtcttcacctcctaccttgatctcagtatgaacaac
attactaagctgccctcaaaccctgtgcacaatctccgcttcctggaagagctacgtctt
gcaggaaatggcttgacatacattcctaagggagcatttgctggccttttcagtcttaaa
gtgctgatgctgcagaataaccagctacgccaggttcctaccgaagcactccagaacctg
cgcagcctgcagtctctacgtctggatgccaatcacatcaactatgtaccccccaactgc
ttcaatggcttggtctcccttagacacctgtggctagatgataattccttgacagaaatt
cccgtacaagcttttaggagtttaccagcacttcaggcaatgacattggcactgaataaa
attcattacattccagactatgcctttggaaacctctccagtttggtagttctacatctc
cataacaatagaatctattccctgggaaagaaatgctttgatgggctccacagcctagag
acattagatttaaattacaacagtctggacgagttccccactgctatcaggacattaaca
aacctaaaagaactgggatttcatagcaataacatcaagtcaatacctgagcatgcattt
gtgggtaatccttcacttattacaatacatttttatgataaccctatccagcttgttgga
aaatctgcttttcaacacttaccagagctaagaactctgactttaaacggtgcttcacag
ttaacagagtttcctgatctgacagggactacaagtctggagagtttgacgctcacagga
gcacagatcacctctctccccaaatcagcttgtgaccagctacctaatctccaagtgctg
gatctgtcttataacctcctggaggatttaccctgttttactgcatgtaaaaaactccaa
aaaattgacttgcatcacaatgaaattgctgaaatcaaagcagacacatttcggcagctg
gctgctcttcggtctctggatttagcttggaacaaaattaaaattattcaccccaatgcc
ttctcctctttaccatctctgatcaaactggatgtgtcatccaaccttttgtcctctttt
cctgtgacggggctacatggtttaactcatttaaaattaacaggaaatcatgccctgcaa
agtttgataacatctgaaaattttccagaactcaaggtcatggaaatgccttatgcctat
cagtgctgtgcctttggggcttgtgagaaccactacagaatctccagccaatggaacaaa
gatgataatagcagcattgatgactttcatagaaaggatgctggactgttacaaattcaa
gatgaacgtgattttgaggacttttttcttgactttgaagaagatttgaaatctcatcat
tcagtgcaatgctcaccttctccaggtcccttcaaaccatgtgaccatctgtttggtagc
tggctgatcagaatcggagtgtggaccgtagtgggtttgacctttatttgcaatgcactg
gtgtctgccacagttttcagatctccattgtatatgtcctccataaaacttttgattggt
ttaatagccattgtaaatgccctgatgggtctggccagtggagtactggctagtgtggat
gcatccacttttggcagctttgctcagtacggagcacagtgggaaagtggaactggttgc
caggtaactggccttctctccatttttgcttcagaggcttccatattcctccttacccta
gctgcactcgaacgtgcattctcagtaaagcatgctatgaagtttgaaacaaaatcctcc
actgctagtgtaaaaattgccatttccttttgctttatgttggcactaatcattgcagtg
atacccctcctcactggcagtgagtatggggtttctcctctttgtttgcctctcccattt
ggggagtccacagctatgggctacatggtagcactggtattgctgaactccctttgcttt
ctggtaatgactgttgcttatacaaagctttactgtaatttagaaaagggagagctagac
agcatttgggattgctctatggtcaaacatatagccttgctactttttactaattgcatt
ctttattgccctgtggccttcttatctttttcctccttactaaatctcacttttatcagc
ccagaagtgattaagtcaatacttctagtgattgtcccactgccagcatgtctaaaccct
ctgctttatatacttttcaatccacattttaaggaggatttgggaagtctgagaaagcaa
actttgatatggaggagatcaaaacatgctagtctgatctctgtgaattcagaagacata
gaaaaacaatcttgtgactcaacacaggcattggtaaccttcacgagtgccagcatatcg
tatgatatgccccccagcagttcactaatggcaccctcttatcaaatgacagaaggctgc
aatctttcatcagtcgcatttgttccctgtcgctag
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