Cinclus cinclus (white-throated dipper): 134043239
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Entry
134043239 CDS
T10813
Symbol
IFT56
Name
(RefSeq) intraflagellar transport protein 56 isoform X1
KO
K19685
intraflagellar transport protein 56
Organism
ccic Cinclus cinclus (white-throated dipper)
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ccic03037
]
134043239 (IFT56)
Cilium and associated proteins [BR:
ccic03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
134043239 (IFT56)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_19
ANAPC3
TPR_16
TPR_14
TPR_2
TPR_8
TPR_17
TPR_6
TPR_9
TPR_1
FMN_red
Motif
Other DBs
NCBI-GeneID:
134043239
NCBI-ProteinID:
XP_062347366
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Position
4:complement(60038951..60083974)
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AA seq
553 aa
AA seq
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MLSRAKPAVGGTPPPGDRRRKKGKEVPQLEELLAQRDFTGAIALLEFKQHVGEEEEDGNL
WIGYCAFHLGDYKRALEEYEALTKQPTCSPDVWVNLACTYFFLGMYTQAEQAALKAPKSG
LQNRLLFHLAHKFSDEKKLMSSHQNLQDVTEDQLSLASIHYMRSHYQEAIDIYKRILLDN
REYLALNVYVALCYYKLDYYDVSQEVLAVYLQQVPDSTIALNLKACNHFRLYNGKAAEAE
LKNLTDSASSSFEFGKELIKHNLVVFRGGEGALQVLPPLVDVIPEARLNLVIYYLQQDDV
QEAYNLIKDLEPAAPQEYILKGVVNAALGQEMGSRDHLKIAQQFFQLVGESASECDTIPG
RQCMSSCFFLLRQFPNVLIYLNSIKSYFYNNDTFNFNYAQAKAAMGNFSEAEEVFLLIQS
EKIKSDFVYLSWLARCYIMNKKPQLAWKLYLKMETSADSLNLLQLIANDCYKMHQFYYSA
KAFDVLERLDNNPEYWEGKRGACVGVFQMILAGREAKETLREVLHLLKSTGNSQVEYIVR
IMKKWAKENRVPV
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgctctcccgggccaagccggccgtggggggtaccccgccgccgggagacaggcggagg
aagaaagggaaggaagtaccgcaattggaagaactcttggcccagagggacttcaccggc
gcgatcgccttgctggagtttaaacagcacgtgggtgaggaggaggaggatggcaacctt
tggattggatactgtgcatttcatttgggtgactacaagagagctctggaggaatatgag
gccttaaccaagcaaccaacttgcagtccagatgtttgggtgaaccttgcctgtacgtac
ttttttctggggatgtacacacaggcagagcaagcagctttgaaagcacctaagagtggt
ctccagaaccgcttactctttcacctggcacataagttcagtgatgaaaagaaactgatg
agctctcaccagaacctgcaagatgttacagaagaccagcttagcctggcatcgatccac
tacatgcggtcccactaccaagaagctattgatatctacaagcgcattctgctggataac
cgtgaatacctggctctgaatgtatatgtggccctgtgctattacaaactggattactat
gatgtatcacaggaagtgttagctgtttatcttcagcaagttcctgacagcaccattgct
cttaaccttaaggcttgtaaccatttccgactttacaatggaaaggctgcagaggcagag
ctcaagaacttgacagacagtgcctcatcatcttttgagtttggcaaggagctcattaag
cacaatctggtggttttccgaggaggagaaggggctctgcaagtcctacctcctctggtt
gatgttattcctgaggcaagactgaatcttgtgatttactatctccagcaagatgatgtg
caggaggcttataacctgattaaggacctagaacctgcagctccacaggagtacatcctc
aaaggggtggtaaatgcagcactaggacaagaaatgggctcgagagatcatctgaaaatt
gctcaacagttcttccagttggtgggggaatcagccagtgaatgtgataccattccaggg
aggcagtgcatgtcctcctgcttctttcttcttagacaatttcctaatgtcctaatttac
ctcaactcaatcaagagttacttctacaacaatgacacttttaacttcaactatgcccaa
gccaaagctgcaatgggcaattttagtgaagctgaagaggtgttccttttgatccagagt
gagaagataaaaagtgattttgtttaccttagctggctggctcgctgctatattatgaat
aagaaaccacagctagcctggaagctttatctgaagatggaaacctcagcggattccctt
aacctattgcagctcattgcaaatgattgttacaaaatgcatcagttttactattcagcc
aaagcctttgatgttctggagagactggacaataatcctgaatactgggaaggcaagaga
ggtgcttgtgtgggtgtatttcaaatgatcttagctggccgagaagcaaaagagactctg
cgggaagtactgcaccttctgaagagcactggcaattctcaagtagaatacattgttcgc
atcatgaaaaaatgggccaaggagaacagagtgcctgtttga
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