Cinclus cinclus (white-throated dipper): 134043245
Help
Entry
134043245 CDS
T10813
Symbol
SNTB1
Name
(RefSeq) beta-1-syntrophin
KO
K24064
beta-syntrophin
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
134043245 (SNTB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntrophin_4th
PH_17
PDZ
PH
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
134043245
NCBI-ProteinID:
XP_062347375
LinkDB
All DBs
Position
1:complement(139176949..139287582)
Genome browser
AA seq
522 aa
AA seq
DB search
MAVAAAGGGGGGRAQRSGWLEVLVRERWHKVLANLGGEALVLSGEERPDGAAHNGLGGDG
AACRGAEGGGGPGAVRTAFTDPPEQVPEAISNKKRCVKVLKQELGGLGISIKGGKENKMP
ILISKIFKGLAADQTQALYVGDAILAVNGTDLRDATHDEAVQALKRAGKEVLLEVKYMRE
ATPYVKKGSPVSEIGWETPPPESPRLGCASADPMSQLSLSIHRDRKTIPLKMCYVTRNMT
VSDPENRIIEVHSPDAKHTVVLRSKDSATAQAWFNAIHSSVNELIPRVIAEVRDQLGKTG
IAGSREIRHLGWLAEKVPGDNEKHWKPVLVVLTEKDLLIYESMPRMKEAWFSPVHTYPLL
ATRLVHSGPGKGSPKSGVDLSFATRTGTRQGIETHLFRTETSRDLSLWTRSVVQGCHNSA
ELITEITTSCTYKSQECRLTIHYEHGFSLTTEPKDGAFSKTIAQYPYEKLKMSSDDGIRM
LYLDFGEKDGEIQLDLHSCPKPVVFIIHSFLSAKITRLGLVA
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atggcggtagcggcggcgggcggcggcgggggcggccgggcgcagcgcagcggctggctg
gaagttttggtgcgggagcgctggcacaaagtgctggccaacttgggcggcgaggcgctg
gtgctgagcggcgaggagcgccccgacggcgcggcccacaacgggctgggcggcgatggg
gcggcgtgccgcggggccgagggcggcgggggcccgggggccgtgcgcaccgccttcacc
gatccccccgagcaggtgcccgaagccatctccaacaagaagcgctgcgtgaaggtgctg
aagcaggagctgggcggactgggcatcagcatcaaggggggcaaggaaaacaagatgccc
atcctcatcagcaagatcttcaaggggctggcggccgatcagacccaggctctctacgtg
ggcgatgccattctggctgtgaacggcaccgacctgcgggatgctactcacgacgaggcg
gtgcaggcgctcaagcgggccggcaaggaggtgctgctggaagtgaaatacatgagagaa
gccaccccgtatgtgaagaaaggctcccctgtgtcagagattgggtgggagacgcctccc
cccgaatccccgcgcctgggctgtgcctctgctgacccgatgtcacagctttccctctcc
atccacagagacaggaagacaattcccctcaagatgtgctacgtgacacgcaacatgaca
gtgtcagaccccgaaaacagaattattgaagttcattcacctgatgccaagcacaccgtg
gtgctcaggagtaaagattcagctacagcccaggcctggttcaatgccatccactccagt
gtcaatgagctcatccccagggtgattgcagaggtcagagaccagctgggtaaaacaggg
attgctggaagtcgagagattaggcatctgggctggcttgcagaaaaggtgccaggagac
aatgagaagcactggaagccagtgttagtggttttgacagagaaagacctcttaatatat
gagagcatgccacggatgaaggaagcttggttcagccctgtgcatacctatcccctgctt
gccaccagattggttcattctggcccaggaaaaggctcaccgaagtccggggtggatttg
tcttttgcaacacgtaccggtacaagacaagggattgaaactcatctgttcaggactgag
accagtcgagacctctcattgtggacaaggagtgtagtgcagggctgccacaattctgca
gaactcatcacagaaatcaccacatcttgcacatacaaaagccaggagtgccgcttgacc
atccattatgaacatggattctctcttacaaccgaaccgaaagatggtgccttctccaag
acaattgcacaatatccctacgaaaaactgaaaatgtcctcagatgatgggataaggatg
ctttatttagactttggagaaaaagatggagaaattcaactggatcttcattcctgtcca
aaaccagttgttttcatcattcattccttcctgtcagcaaagatcacaagactgggcttg
gtggcataa
DBGET
integrated database retrieval system
