Cinclus cinclus (white-throated dipper): 134043262
Help
Entry
134043262 CDS
T10813
Symbol
UTP20
Name
(RefSeq) small subunit processome component 20 homolog
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
ccic Cinclus cinclus (white-throated dipper)
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccic03009
]
134043262 (UTP20)
Ribosome biogenesis [BR:
ccic03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
134043262 (UTP20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
Motif
Other DBs
NCBI-GeneID:
134043262
NCBI-ProteinID:
XP_062347393
LinkDB
All DBs
Position
4:complement(61343907..61407099)
Genome browser
AA seq
2793 aa
AA seq
DB search
MKSKPSAHKSGNTHRFLTFSERLSNINIDIIHRIDRTGSYAEEVETYFFEGLRKWKELNL
TQHFVQFYSEVANKCQSFNQLVYYQNSVVQSLKTHLQVEGSLAYQPLLNLVVQLARDLQA
DFYPHFHDFFLAITKLLDTQDTELLEWAFTSLSYLYKYLWRLMVKDIHNIYSLYSTLLAH
HKLHIRNFAAESFVFLMRKVSDKNELFNLMLCDLGEHPEKVEGVGQLLFEMCKGVRSMFH
SCAETAMKLILLKLGPMTEKEIELPWVAVGEAFEQMIRSAAVHIHKEHFDIVFKCLEESI
LDLQRKITKVNCSVASEQMERILQAYLILVEHANGSKISLPEDVCQVLIKMLQTPYLSSS
CCKMLLSTISAFLLAENVLLPDSLTREAIQKVFASGFERHFLFNFSEAMFRMKQFERHFL
PCFLEYIEHCFSGTDAITKDEAVAILAKLILVKAEPPTIGSMAFEKYPLVFTEASVSSNT
RQQTSKRQGEKAEVPVLDHVLSLMHLPEKEDITDLSQAWVALVVLPHIRPMNKDHILPRV
TSFIDSLFTAIDKGSLCKGNLFVACQAVSTLLSLVESAEVLHLLPVERVKSLVTTFPSDP
SALLLADLYYTRLALCGCQEPLSQGNLMDLFEKLHPNISTGVSKVRLLTVRILNHFDNPP
SAQIEGDGTGEFQPVFTILLQAELVPATVNDYREKLLHLRKLRCDIVQPAIPSGSLQEVP
LRYLLGMLYINFSPLWDPVIELITSHAKEMENKQFWKVLYEHLERAATYAEMELQNELDE
QEESIAETESEKMPEGEVGTVFLEQLRSRTDCSERLDHTNYRFLLWKALDKFPDRVEPRS
RELSPLLLRFIRNEYYPADSLVAPSQDLRRKISGTIATKQTPAEEVNDVAMEEEEEEEKE
EEEPVNVGVPKKKTRRAAAKQLIAHLQVFSKFSNPRALYLEQKLNALYTQLLTHQDQNVQ
RIALDCIMTYKHPHLLPYRENLQRLLEDKSFKEEIVHFSISEETTVVKTEHRPDLVPVLM
RILYGRMRNKTGSKTQGKSSASTRMSIVLRFLAGSLPEEIRMFLDLLFEAVKQFSNGPCQ
TAVLQSMSELDLAKVLPLGRQHSLFNGLEVVLKNMGHLIQQYLPEILQILLCMTAVVSCI
LQQREKVQLRLINPLKNLRRLGLKLVAEFFSDYETYSFSVEEIDAVFHAVVWPQVCRLAS
ESQYSPTFLLKLIHTWSKNPRYFPLLAKQQPDHPESDILTNVFAVLSAKNLSEATSSLVM
DIADSLLNSPDFEPTEQVSSLSVTDCVVMATGDVTEEPLSLGCRLVLPHVPAILQYFSKT
MLNVEKVKKKKYRAQVSKELSILSKISKFIQEKSQNSVLVSLLLPFLYQSNMEQGTQIDI
LETVQNLLKHCSNPTSFLKPLARLFSVIQNKLSRNKLCLVFQTLSDLDTKLKYITDVVKL
NAFDQRHLDDIDFDVRLSAFQSITAHIKEMQTVDTDFLIPVMHNCFYTIQLGDMALSDNA
SLCLTSFIHRLAEISHTEDEYKELIQHTLLESVRRGLKSKTESVQQDYTSLLSCLIQTFP
TNPEFQDLVQLTNHHDPDMDFFENMKHMQIHRRARALRKVAKQLTEEKLVLSSKSLQNYI
MPYATTAIFSEKMLKHENMVTASVEVVGAVCRHLSWSAYLYHLKHFIHVLQTGQIGTKLG
VSLLETVLEAFHFDHETLEKQLLTIDSQEAAAMDLEPVVEAEEAMELEQSEGEEEEVEEK
NGKNLSEKPAEPEQATEPSENAEQVPKPVSFLPRNKEELQCLIKHIQETVTVNILPKLHR
CIVAKVKRDEEHKLVKSSVVNDDEVVRVPLAFAMVRMMQCLPQEVMEANLPSILLKVCTF
LRNRFQEIRDVARNTLIKIMEVLGVHYLLYILKEMRSALIHGYQLHVLTFTVNLLLKGLA
TRLSAGDLDPCLDILIEIFNQELFGNVAEEKEVKGIVSKIMEARKNKSYDSYEILGKFIG
RGQVTKLILPLKEVRENTTSLKIVRKVHEALRHIMAGLIFNSDMNAESLLLLSHGLISEN
LPLLTEKAKKKATPPPDPRLQPESCLLLQPTPTRGGQKARVSSRTNTYILVDSGLRLLHM
SLKRSKVNSSEEHALEMLDPFVQLLIDCLKSMDVKVITGALQSLVWILKFPLPSVSTNME
SLIKQLFLLLKEFAKTGVAKGQNFHLVVSCFKCVTILVKNTKSQITSKQLQVLLGFAEED
IYDSSRQATAFGLLKAILSRKLIVPEIDDVLQKVAQLAITGQSEPVRVQCRQIYLKYILD
YPLGDKLKPNLDFMLAQLEYEYETGRESALEMIAYLLDMFPQDLLHKYCGLFFLSLCMMM
INDDSAKCKKMAALTCKSLLRKISSEKQDLMFSLVTEWFHSKKSSHRRLAAQACGLFVEV
DGVMFERRLAAVLTLIEKEINPSKFENITEEEEEKAADRLLFSFLVLVKKLITECNLIQL
TRNNDVVSSIWDHVQSHLWYPHSWVWLTATEIFGLLFASYKPEDLVNKWKEGKSGKRKKA
PAELSASIVFLTAELDKKMKELAFAFCHQLQSKFLDVSLSEQVIKNLLFVAKVVYLLAPA
SEEGKEADGELGCEVEEQEVSEDERDTSAQGGEEREDTQEKGQPATLLWLMKKLSVMVKR
EAAYSPKVPLKRSCIFKFLGAISVDLGQDRIKPYLPTILTPLYRELNSNYAEQDPTLKNL
SQEIIELLKKLVGLEAFSLAFSSVQKQANQKRAMRKKQRALQTVANPDIAARRKLKRHKN
KAETRKRKIESLRPMYKAKRHRSNALKDLAMVE
NT seq
8382 nt
NT seq
+upstream
nt +downstream
nt
atgaagagcaagccctcggcccacaagtcgggcaacactcaccggtttcttaccttttca
gagcgcctaagcaacattaatattgatattattcatcggattgacagaactgggagctat
gctgaggaggttgaaacctactttttcgaaggactgcggaagtggaaggaactgaacctc
actcagcattttgtgcaattctacagtgaagtggccaacaaatgccagtccttcaaccag
ctggtttattaccaaaattctgttgtgcagagcttgaagacacatttgcaagttgaaggc
agtcttgcttaccaacccctattaaatctggtggtgcagctggctcgagatcttcaggct
gacttctatcctcactttcatgactttttcctggccatcaccaaattattggatacgcag
gacacagagctgctagaatgggcttttacttctctttcctatctctacaagtatttgtgg
agactgatggtgaaggacatacacaacatttacagcctctacagtaccctgctggctcat
cacaaactccacatcagaaactttgctgctgaaagttttgtctttctaatgagaaaggtt
tctgataaaaatgagctcttcaatttaatgctctgtgacctgggagagcaccctgaaaag
gtggaaggtgtaggacagctgctttttgagatgtgcaagggtgttcgaagcatgttccac
tcctgtgcagagacggctatgaagttaattctgttgaaactggggcctatgaccgaaaaa
gaaattgagctaccatgggtagctgttggagaagcctttgagcaaatgattagatcagct
gcagtgcatatccataaggagcattttgacattgtcttcaagtgcctggaggagtcaatc
ttagatttgcagaggaaaataactaaggtcaactgctctgtggcttcagagcagatggaa
aggattctgcaagcttatctgatcttagtggaacatgcaaatggatctaaaatctcactg
cctgaagatgtctgtcaggttttgataaaaatgttacaaacaccgtatctctcatcatct
tgctgcaagatgctgctgagcaccatttctgcattcctactggctgaaaatgttctgttg
ccagattctttgaccagggaagctattcagaaggtgtttgcaagtggatttgaacgccat
tttcttttcaacttctctgaagcaatgttcagaatgaaacagtttgagaggcattttctc
ccatgctttctagaatacattgaacactgcttctctggcacagatgccatcacaaaggac
gaggctgtggcaattctggctaaactcattttggtgaaagcagagcctcctactattggt
tcaatggcatttgaaaagtatcctcttgttttcactgaagcatctgtcagctctaataca
aggcaacaaacaagtaaaaggcaaggagaaaaggcggaagtaccagtgttggatcatgta
ctgtctttaatgcatttaccagagaaggaagacatcactgacctttcacaggcttgggtt
gccttggttgtactgccacatattagaccaatgaacaaagaccacattctgcctcgtgtg
acaagttttatagactctctcttcacagccattgacaaaggaagcctctgcaaaggaaac
ctgttcgtggcctgccaagctgtaagtactctacttagtttggtggagtctgctgaagta
ctccatttgttacctgtggagcgtgtcaagagcttggtgaccactttcccttcagacccc
tctgccttgctgttggctgatctctattacacgaggttggcattatgtggctgccaggaa
cccctttcccaagggaacctaatggacttgtttgagaagttgcatcctaatatttcaact
ggtgtttccaaggtccggctgttgacggttcgaattctaaaccattttgataatccaccc
tctgcacagattgagggtgatggcacaggggaattccagccagtatttaccatattgctc
caagcagaacttgtgccagcaacagtgaatgattacagagagaaacttctccatttgagg
aaactaagatgtgacatagtgcagcctgcaattccaagtggatctttgcaggaggtgcct
cttcggtatttactgggaatgctttatattaacttcagccccctctgggatcctgtaatt
gaacttataacttctcatgcaaaggaaatggagaataaacagttctggaaggtcctgtat
gaacatttggagagggctgctacctatgctgaaatggagctacaaaatgagctagatgaa
caggaggagagcattgctgaaacagaaagtgagaagatgcccgaaggagaggtggggact
gtctttctggagcagctgaggagtagaacagattgcagtgaaaggctggaccacacaaat
taccgtttcctactgtggaaagcactggataagtttccagacagagtggaacctcggtca
agggaactttctccacttcttttgagattcattcggaatgaatactacccagcagattcc
ttagtggctccatctcaggatctcagaaggaaaattagtgggaccatagcaacaaaacaa
acacctgctgaagaggtgaatgatgttgctatggaggaggaggaggaagaagaaaaggaa
gaagaagaaccagttaatgtaggagtaccgaaaaagaaaacaagaagagctgctgctaag
caactaatagcccacttacaagttttctcaaaattctcaaatcctcgtgcattgtatctg
gagcagaagttgaatgccttgtatacccagttactcactcatcaagaccagaatgtacag
agaatagctcttgactgtataatgacatacaagcatcctcatctactgccatacagggag
aacttgcaaaggctactggaagacaagagctttaaagaagagatagttcatttcagtatt
tctgaggagaccacagtagtaaaaacagagcatcgaccagatctcgtccctgttcttatg
agaattctctatggcagaatgagaaacaaaacaggaagcaaaacacagggcaagtcttca
gcgagcactcgcatgtccatcgttcttcggtttctggctggctcactgccagaagagata
cggatgttcttggatctactctttgaagctgtgaagcaatttagtaatgggccttgccag
actgcagtccttcaaagtatgtcagagctggacttagctaaagtcctgcctcttggacgt
cagcatagcctcttcaatggtctcgaagttgtgttgaaaaacatgggacatttgatccag
caatacctgcctgaaattctacagattcttctctgcatgactgctgtggtatcctgcatc
ctccagcaaagagagaaggtccaacttaggttgattaatccactgaagaatttgagacgt
cttggtctcaagcttgtggcagagtttttttctgattatgagacgtacagctttagtgtg
gaagagattgatgcagttttccatgcagtggtatggcctcaggtctgcagattggcttca
gagagtcagtattctccaacttttctgctcaaactcattcacacctggagtaagaacccc
aggtatttccctttgctggccaagcagcagccagatcatccagagagcgatatactgaca
aatgtgtttgctgtgctgtcagccaagaatctgtctgaggccacatccagccttgtgatg
gacattgctgatagccttctcaacagcccagattttgagcccacggagcaggtttccagt
ttgagcgtgactgactgtgttgtcatggccactggagacgtgacagaagagcccctcagc
ctaggttgccgcttggtcctgcctcatgtccctgccatacttcagtacttcagcaaaaca
atgttaaatgtggaaaaggtgaaaaagaagaagtacagagctcaagtcagcaaagagctg
agtatactttccaagatcagcaaatttattcaagaaaagagccagaattcagtgcttgtg
agccttctcctccctttcctttatcagagtaacatggaacagggtacacaaattgacatt
ctggagacagttcagaacttgctgaagcattgctctaaccctacaagctttctcaaacca
ctggcaaggcttttttctgtcatccagaacaaactgtctcgaaataagctgtgcttggta
tttcagactttatctgacttggacactaagttgaagtatattactgatgttgttaagctg
aatgcctttgatcagcgacatctggatgatattgacttcgatgtgcgtctctcagcattt
cagtcaatcacagcccacattaaggaaatgcaaacagtggatactgacttcctcatccct
gttatgcacaactgcttctataccatccagctcggggatatggctcttagtgacaatgca
agcctttgcttgaccagtttcatccaccgactggcagaaatcagtcacacagaagatgag
tacaaggagctaatccagcacactctcctggagtctgtgagaagaggtctgaagagtaag
actgagagcgtccagcaggactacacatcactgctttcctgcctcattcagacattccca
acaaatcctgaattccaggatttggtccagctgacaaaccaccatgatcctgacatggac
ttctttgagaacatgaaacacatgcagatccacaggcgagcacgagctctgaggaaggtg
gcaaagcagctcactgaagaaaagcttgtgctgtcttccaaatccctccagaactacatc
atgccttatgctacaactgctattttcagtgaaaaaatgcttaagcatgaaaatatggta
acagcctcagttgaagttgttggagctgtctgccgacatctttcatggtcagcatacttg
taccacttaaagcatttcatccatgtcttgcaaacaggacagattggtacgaagctggga
gtcagcttgttagagacggtactggaagcctttcacttcgaccacgaaacgcttgaaaag
cagcttttgaccattgacagccaagaagctgctgccatggaccttgagccagtggtggag
gctgaagaagccatggagctggagcagagtgaaggggaagaggaggaagttgaagaaaag
aatgggaagaatctctctgagaagccagcagaacctgagcaagcaactgagccatctgaa
aatgctgagcaagtgcccaagcctgtttcgttcttaccccgaaataaggaggagcttcag
tgtctgatcaaacacattcaagaaacagttacagtcaacatcttgcctaaattgcacagg
tgtattgttgcaaaggttaaaagagacgaggagcacaagcttgtgaaatccagtgttgtg
aatgatgatgaggtagttcgtgttccattagcttttgcaatggtcagaatgatgcagtgt
cttccccaggaagtgatggaagccaacctaccaagcattcttctgaaagtctgcacattc
ctgagaaacagatttcaggaaatacgggacgttgcccgtaacaccctcattaaaatcatg
gaagtgttgggagtgcactaccttctgtatatcttaaaggagatgcggtctgcgctcatc
catgggtaccagctccatgtgctgactttcactgtgaacctgttactgaagggccttgct
accaggctcagtgctggtgatttggacccctgcttagatatcctgattgagattttcaac
caagaattgtttgggaatgtagctgaagagaaagaagtgaagggaattgtctccaagatc
atggaagcacgcaaaaacaaaagttatgattcctatgaaattcttggaaagttcatagga
aggggccaggtgacaaaacttattctgccactgaaagaggtaagagaaaacactacaagc
ttgaagatagtccggaaggtgcacgaggcactgcgtcacatcatggcagggctgatcttc
aactcagacatgaatgcagaatccctcctcctcctcagtcatggtctcatcagtgaaaat
ttgcctctgctcactgagaaggccaagaaaaaagctacccctcctccagatcctcggctg
caaccggagagctgcctgctgctccagcccactcccacaagaggagggcagaaagcacgt
gtcagcagcaggactaacacatatatcctggttgattcaggacttcggctactgcacatg
agcctgaagagatccaaagtaaattcttctgaggaacatgctttggaaatgttagaccct
tttgttcaactgcttatagactgcctgaaatctatggatgtcaaggtgataactggtgct
ctgcagtccttggtatggatattaaagttccctttgccttctgtcagtacgaatatggag
tcactgatcaagcagcttttcctcttgctgaaagagtttgccaagacaggagtagccaaa
ggccagaatttccacctggttgtgagctgtttcaaatgtgtaacaatacttgtgaagaat
acaaagagtcagataacaagcaagcagctccaagtgttgcttggctttgctgaagaagac
atttacgattcatcacgccaagccactgcctttggccttctcaaggctattttatccagg
aagctgattgtccctgaaattgatgatgtgctgcagaaggttgcccagctggccatcaca
ggtcagagtgagccagtgcgagtccagtgcaggcagatttatttaaaatacattctggat
tacccccttggtgacaaactgaaaccaaatttggatttcatgctcgcacagctggagtac
gagtatgaaactgggagggaatctgcgctggagatgattgcatacctccttgacatgttc
ccacaggatctcctgcacaaatactgtgggctgttttttctctccctttgtatgatgatg
ataaatgatgactcggccaaatgcaaaaagatggcagctttgacatgcaaatctcttctc
cgtaagatcagcagtgaaaaacaagatctgatgttttctctggtcacagaatggtttcac
agcaaaaagagctcacacaggaggttggctgcccaggcatgtggtttgtttgttgaagtg
gatggagtaatgtttgaacggcggcttgcagcagtcctcactttgattgaaaaagaaatc
aacccaagtaaatttgaaaatataactgaagaggaagaggaaaaggcggcagataggctg
ctattcagctttcttgtgctggtaaaaaagctaatcacagagtgcaacttgattcaatta
accaggaacaatgatgttgtgagcagtatctgggatcatgtccagtctcacctgtggtat
cctcatagctgggtctggcttacagccactgagatctttggcttgttatttgcatcttat
aagccagaagatcttgtcaacaaatggaaggaaggaaagtcagggaagagaaaaaaggca
ccagcagagctgtctgcatccatagtcttcttgactgctgaactggacaaaaagatgaag
gaactcgcatttgcattctgccatcagctgcagtccaagttcttggatgtgtctctgagt
gagcaggttataaagaatttactttttgtggccaaagttgtttacttgctagcccctgcc
tcagaagaaggtaaagaagcagatggagaactcgggtgtgaagtggaagagcaggaggtc
tcagaggatgagagagatacttctgctcaaggaggggaagaaagagaggacacacaagag
aaaggccagccagccacactgctgtggttaatgaagaagctctctgtcatggtgaagaga
gaagcagcatattcccctaaggtccctttaaagagaagctgcatctttaagttcctggga
gcaatctcggtggatctggggcaagacaggatcaagccctaccttccaacaattctcacc
cctctgtacagggagctgaacagcaactatgcagagcaagatccaacactgaagaacctt
tcccaagaaatcatagaacttctcaagaagttagtggggctcgaggccttttcactggcc
ttttcttctgtgcagaaacaggccaaccagaaaagagcaatgaggaaaaaacagagggct
ttgcagactgtagcaaatcctgacattgctgcaaggaggaagctgaagagacataagaat
aaagcagaaaccaggaagagaaaaatagaatctctacgccctatgtacaaggccaaacgc
catcgaagtaatgcactgaaagatttggcaatggtggaatga
DBGET
integrated database retrieval system
