Cinclus cinclus (white-throated dipper): 134043304
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Entry
134043304 CDS
T10813
Symbol
SMO
Name
(RefSeq) protein smoothened
KO
K06226
smoothened
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
134043304 (SMO)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
ccic04030
]
134043304 (SMO)
G protein-coupled receptors [BR:
ccic04030
]
Frizzled / Smoothened family
134043304 (SMO)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Frizzled
Fz
Dicty_CAR
Motif
Other DBs
NCBI-GeneID:
134043304
NCBI-ProteinID:
XP_062347451
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Position
4:complement(65837668..65843431)
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AA seq
780 aa
AA seq
DB search
MWPGRGGRRWTLALALALALGGRCPAAPNASAGPPRCRRPAPCERLRFGACLGSALPYAA
TSTLLATDSASQEEAHGKLLLWSGLRNAPRCWDVIQPLLCAVYMPKCEDGQVELPSQTLC
QATRAPCTIVERERGWPDFLKCTTDRFPEGCPNEVQNIKFNSSGQCEAPLVRTDNPKSWY
EDVEGCGIQCQNPLFTEKEHREMHVYIAAFSSVTIFCTFFTLATFVADWRNSNRYPAVIL
FYVNACFFVGSIGWLAQFMDGARDEIVCRADGTMRLGEPTSNETLSCVIIFVIVYYSLMS
GVIWFVMLTYAWHTSFKALGTTYQPLLGKTSYFHLITWSIPFVLTVAILAVAQVDGDSVS
GICFVGYKNYRYRAGFVLAPIGLVLIVGGYFLIRGVMTLFSIKSNHPGLLSEKAASKINE
TMLRLGIFGFLAFGFVFITFGCHFYDFFNQAEWERSFREYVLCEANVTIATQTNKPIPEC
EIKNRPSLLVEKINLFAMFGTGVSMSTWVWTKATLLIWKRTWCRLTGQSDDQPKRIKKSK
MIAKAFSKRKELLRDPGQELSFSMHTVSHDGPVAGLAFNINEPSADVSSAWAQHVTKMVA
RRGAILPQDISVTPVATPVPPEERANLWVVEADVSPELQKRSGRKKKRRKKKKKEVNPDP
ERCLGGSTVPRLPHLPPQPCLVAFAPDVLPDATFARGPWDGQSRRANVLHVISNPFCPES
GATDHESPSTGCWQHNGGPLWPPKPGPGVPRTQGRWAGLAPIHSRTNLVDAELLEPDSDF
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atgtggccgggccgcggcgggcggcgctggacgctggcgctggctctggcgctggctctg
ggcggccgctgccccgccgcccccaatgcctcggccgggcccccgcgctgccgccgcccc
gcgccctgcgagcggctccgcttcggcgcctgcctgggctcggcgctgccctacgccgcc
acctccacgctgctggccaccgactccgcctcgcaggaggaggcgcacgggaagctgctg
ctctggtccggcctgcgcaatgccccgcgctgctgggatgtcatccagcccctgctctgc
gccgtctacatgcccaagtgtgaagatgggcaggtggagctgcccagccagaccctgtgc
caggccacacgggcaccctgcaccatcgtggagcgtgagcgaggctggcccgacttcctc
aagtgcaccacagaccgcttccctgaggggtgcccgaacgaggtgcagaacatcaaattc
aacagctcagggcagtgcgaggcaccgctggtgaggacagacaaccccaagagctggtat
gaggacgtggagggctgcggcatccagtgccagaacccgctgttcaccgagaaggagcac
cgcgagatgcacgtctacattgccgccttcagctccgtcaccatcttctgcaccttcttc
accctggccacgtttgttgctgactggaggaactccaaccgctaccctgccgtcatcctg
ttctacgtcaatgcctgcttcttcgtgggcagcattggttggctggcacagttcatggat
ggtgcccgtgacgagatcgtgtgccgggccgatggcaccatgcggctgggtgagcccacc
tccaatgagacgctgtcctgcgttatcatctttgtcatcgtgtactactcgctgatgtcg
ggtgtcatctggtttgtcatgctcacctacgcctggcacacatccttcaaggccctgggc
accacctaccagccgctgctgggcaagacctcctacttccacctcatcacctggtccatc
cccttcgtgctcaccgtggccatcctggccgtggcgcaggtggacggcgactctgtcagt
ggcatctgcttcgtgggctacaagaactaccgctaccgagcaggctttgtgctggccccc
atcgggctcgtgctcatcgtggggggctatttcctcatccggggggtcatgacgctcttt
tccatcaagagcaaccaccccgggctgctgagcgagaaggcggccagcaaaatcaacgag
accatgctgcgcctgggcatcttcggcttcttggcctttggctttgtcttcatcaccttt
ggctgccacttctacgactttttcaaccaagctgagtgggagcgcagcttccgggaatac
gtgctgtgtgaggccaacgtgaccatcgccacgcagaccaacaagcccatcccagagtgt
gagatcaagaaccggccgagcctgctggtggagaagatcaacctgttcgccatgtttggc
accggcgtctccatgagcacctgggtctggaccaaggccaccttgctcatctggaagcgc
acctggtgcaggctgacggggcagagcgatgaccagcccaagaggatcaagaagagcaag
atgatcgccaaggccttctccaagcgcaaggagctgctgcgcgacccgggccaggagctg
tccttcagcatgcacaccgtgtcccacgatggccccgtggccgggctggcgttcaacatc
aacgagccatcggccgacgtgtcctcggcgtgggcccagcacgtcaccaagatggttgcc
aggagaggggccatcctgccccaggacatctctgtgacacctgtggcgacacctgtgcca
ccagaagagagggccaacctgtgggtggtggaggccgacgtgtccccggagctgcagaag
cgcagcggccgcaagaagaagcggaggaagaagaagaagaaggaggtgaacccagaccct
gagcgctgcctggggggctccaccgtccctcgcctgccccacctgcccccgcagccctgc
ctggtggcctttgctcccgatgtcctgcccgatgccaccttcgccagggggccgtgggat
gggcagagccgcagagccaacgtcctgcacgtgatcagcaaccccttctgccccgagagt
ggggccaccgaccatgagagccccagtactgggtgctggcagcacaacgggggtcccctg
tggccccccaaacccggcccaggggtgcccaggactcagggccgctgggcagggctggcc
cccatccactcccggaccaacctggtggatgcagagctgctggagcccgactcggacttc
tga
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