Cinclus cinclus (white-throated dipper): 134043446
Help
Entry
134043446 CDS
T10813
Symbol
NUP50
Name
(RefSeq) nuclear pore complex protein Nup50 isoform X1
KO
K14295
nuclear pore complex protein Nup50
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
134043446 (NUP50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccic03019
]
134043446 (NUP50)
Messenger RNA biogenesis [BR:
ccic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
134043446 (NUP50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUP50
Ran_BP1
Motif
Other DBs
NCBI-GeneID:
134043446
NCBI-ProteinID:
XP_062347749
LinkDB
All DBs
Position
4:20396550..20412389
Genome browser
AA seq
511 aa
AA seq
DB search
MLNAPRGCAACEETPPLARRSVGPAAQRRGREAPARASECGKMAKRIAEKELTDRNWDQE
DEAEEVGTFSVASEEVLKNRAIKKAKRRNVGSESESGGAFKGFKGFILPSGKGGGGFSGF
GNGAGIKPLEGLSNGSSSVSSTPPFSSLKSASETQSAFGSPMSNGPSAAVFAEKNAVSPR
ANGGSQPCSSGSALSTAHGSSTYHKQLAALNCSVRDWIVKHVNSNPLCDLSPIFRDYEQY
LASIEQQHGGSSDSGSENESSKTPGPRAGPVFGSSKLQQGSAFLFNNKTEDTSDKKPEAA
SEKRDPLLGATSTVSLNFGKSVDSSVLGSLGSGTLNSFSFSPGNSGLFGKDASQAKSVTA
ASTSLLEAQTDGGNSDDKGGEEEEEEPPKVIVNEIKEDDAFYSKKCKLFYKKDNEFKEKG
VGTLHLKPAGNEKTQLLVRADTNLGNILLNVLIPPKMPCTRTGKNNVLIVCVPNPPIDEK
NPAVPVTMLIRVKTSEDADELHKILLEKKEA
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgctgaacgcaccccggggctgcgcggcctgcgaggagaccccgcctctcgcccgccgc
agcgtcggccccgcagcgcagcgccgcgggagagaagcgcccgcccgagccagtgagtgt
ggaaaaatggcaaagagaattgcagagaaggaactgactgaccgaaactgggaccaggag
gatgaagctgaagaggtgggaacattctcggtggcaagtgaagaggtcctaaagaacaga
gctatcaaaaaagcaaagcgccgaaatgttgggtcagagtctgaaagtggaggagctttt
aaagggtttaaaggctttatattgccttctggaaaaggaggaggtggcttcagtggattt
gggaatggtgcaggaataaagcctttggaaggtctgtctaatggaagcagtagtgtctct
agtactcctcctttcagcagtttgaagagcgcctccgaaacacaatcagcatttggatcc
ccaatgtcaaatggtcccagtgccgctgtgtttgctgagaaaaacgccgtgagcccgaga
gccaacggtggcagccagccctgctcatctggcagcgccctgagcacggcccatggctcc
agcacctaccacaaacagctggctgccctcaactgctccgtgcgggactggatcgtgaag
catgttaacagcaaccccctgtgcgacctgagccccatcttcagggactatgagcagtat
ttggcgagcattgagcagcagcatggaggcagcagtgacagcggctcagagaacgaaagc
agcaagacccccggtccgcgggctggtcctgtgtttgggagttcaaagctccagcaaggc
tctgcgtttttgtttaacaacaaaactgaggatacctcagacaaaaaacctgaagctgca
tcagaaaaaagagacccattgttaggagctacatcaactgtctcgttgaattttggcaag
agtgttgacagttctgttttgggttcccttggttcaggaacacttaatagtttctcattt
tctcctggtaattcaggtttgtttggaaaagatgcaagccaggctaaatctgtcactgca
gcatccaccagtttactggaagcccagacagacggtggcaatagtgatgacaaaggaggg
gaagaagaggaagaagagccaccaaaagtcattgttaatgaaataaaagaagatgatgct
ttctactcaaagaagtgcaaactgttctacaaaaaagataatgaatttaaagaaaaaggc
gtaggaacattacatttaaaaccagcaggaaatgagaaaactcaactcttagtacgagca
gataccaatttaggaaatatactgttgaatgttctaattccacctaagatgccatgtaca
agaaccggaaaaaacaatgttcttatagtttgtgttcctaatccacccatcgatgagaag
aatccagctgttcctgtcactatgctaataagagtgaaaacaagtgaggatgcagatgag
ttgcacaaaatcttactggagaaaaaggaggcttaa
DBGET
integrated database retrieval system
