Cinclus cinclus (white-throated dipper): 134043486
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Entry
134043486 CDS
T10813
Symbol
MKRN1
Name
(RefSeq) E3 ubiquitin-protein ligase makorin-1 isoform X1
KO
K15687
E3 ubiquitin-protein ligase makorin [EC:
2.3.2.27
]
Organism
ccic Cinclus cinclus (white-throated dipper)
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccic04121
]
134043486 (MKRN1)
Enzymes [BR:
ccic01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
134043486 (MKRN1)
Ubiquitin system [BR:
ccic04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
134043486 (MKRN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MKRN1_C
zf-CCCH_4
Torus
zf-CCCH
zf_CCCH_4
zf-CCCH_DUS3L
zf-CCCH_2
zf-RING_UBOX
zf-C3HC4
zf-CCCH_3
zf-RING_2
zf-RING_5
zf-rbx1
zf-ANAPC11
zf-C3HC4_4
zf-CCCH_PARP12
Motif
Other DBs
NCBI-GeneID:
134043486
NCBI-ProteinID:
XP_062347845
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Position
4:complement(27461545..27482074)
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AA seq
523 aa
AA seq
DB search
MAEAVAALETTAGAAAAALGSPAAAAGAAAVAFDFAAVPPPSAGPGGGGWTKQVTCRYFM
HGVCKEGDNCRYSHDLSTSQSTMVCRYYQRGCCAYGDHCRYEHTKPLIQEEVTDVNPEAE
IYPSVSSEFASLPETVEEFIAEIEDENTDLAAAGVGAEDWVNAVEFVPGQPYCGRGPLQV
LEGCSKVTPEPSLLQAEQPPLSEPFLIGEVFHPSNHLHGPQLAAPFCAEAPLQEMVIEEE
YEKQQADVEMKKELCPYAALGECRYGENCVYIHGDVCDMCGLQVLHPIDAAQRSQHIKSC
IEAHEKDMELSFAVQRSKDMVCGICMEVVYEKANPSERRFGILSNCSHTYCLKCIRKWRS
AKQFESKIIKSCPECRITSNFVIPSEYWVEEKEEKQKLIQKYKEAMSNKPCRYFDEGRGS
CPFGGNCFYKHEYPDGRQEEPQRPKVGTSSRYRAQRRNRFWEFIEERENGDPFETDEDEV
VTFELGEMLLMLLAAGGDDELTDSEDEWDLFHDELEDYYDLDL
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggcggtggcggcgctggagacaacggcgggcgcggccgccgcggccttgggg
tcacccgcggcggctgcgggagctgcggccgtcgccttcgacttcgcggccgtgccgccg
ccctccgcggggccggggggaggcggttggaccaagcaggtcacctgcagatacttcatg
catggagtctgcaaggagggagacaactgccgctactcccatgacctctccaccagtcag
tccaccatggtgtgcaggtattaccagcgaggatgctgtgcttatggagatcactgcaga
tatgaacataccaagccactaatacaggaagaggtgactgatgtgaatccagaagcagaa
atctatccatcagtgtcctcagagtttgcatcgctccctgaaacagttgaagaatttatt
gctgagatagaagatgaaaatacagatctggcagcagcaggagtaggtgctgaagactgg
gtgaatgcagtggagtttgtccctgggcagccgtactgtggacgtggcccccttcaggtc
ctggaaggctgcagtaaggtcaccccggagccttctcttctccaggctgaacaaccccca
ctctctgagcctttcctcataggggaggtgttccatccctccaaccatcttcatggccct
caactagctgctcctttctgtgctgaagcgcccttgcaggaaatggtgattgaggaagaa
tacgagaagcagcaggcagatgtggagatgaagaaggagctgtgcccctacgctgcatta
ggagaatgtcgttatggagaaaactgcgtgtatatccatggggacgtgtgtgatatgtgt
ggcctgcaggtcttgcatcccattgatgctgcacagagatctcagcacataaagtcttgc
attgaagctcacgagaaggacatggagctttcctttgccgtccagcgtagcaaagacatg
gtgtgtgggatctgcatggaggtggtgtatgagaaagccaatcctagcgagcgccgcttt
gggatcctctccaactgcagccacacttactgtctcaagtgcatccgcaagtggaggagt
gctaaacaatttgagagcaagattataaagtcctgcccagaatgccggatcacatctaac
tttgtcattccaagtgagtactgggtggaggagaaggaagagaagcagaaactcattcag
aaatacaaggaggcaatgagcaacaagccatgcaggtattttgatgaaggccgtgggagc
tgtccatttggagggaactgtttttacaagcatgagtatcctgatggccgccaagaggag
ccacaaagacccaaagtaggaacctcaagtagataccgggcccagcggagaaatcggttc
tgggagttcatcgaggagcgagagaatggtgatccctttgaaaccgatgaggatgaggtg
gtgacctttgagcttggtgagatgttgcttatgctgttggcagccggaggtgatgatgag
ctgacggattctgaggacgagtgggacttatttcatgatgagctggaagattattatgat
ttggatctatag
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